Ss1.1-LyN1-MLN01B060027.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACTGGGACTTGGGCAGTGCTGGGATCCAGGGCCGCTTCTGGGGCTTGAGGCAGGGTAGGA GTGGGGCACCGGTGATGGTGCCGGCGCTGCGTTACCTGGGCAGCGTCTACGGACGTGCCC GCGGGGCTTTCTCCGGAGGCTTCCTCGCTGCTGGCGCGCCCGCGCCAGGTGCCAAGGTGG CCGCAGAGCCAGCACCAGGTGCATTCTCTTAAAGCTCATTTGATGTAGTCATTATCGGTG GCGGAATTGTGGGGCTTGCCTCTGCCAGAGCCCTCATCCTGCGACATCCAGCACTTTCCA TTGGTGTTCTGGAAAAGGAGAAGGATTTAGCTATTCATCAGACTGGACATAACAGTGGTG TCATACATAGTGGAATTTATTATAAACCTGAATCTCTGAAAGCTAAATTATGTGTGCAAG GTGCAGCCCTCATCTATGAGTACTGTAACCAAAAGGGGATTTCCTACAAGCAATGTGGCA AGCTTATAGTAGCTGTTGAACAAGAAGAAATTCCCAGACTTCAGGCGTTATATGAGAGAG GCCTGCAGAATGGTGTTCAGGGCCTGAGGCTGATCCAGCAGGAGGATATAAAAAAGAAGG AACCATATTGTAGGGGTCTAATGGTTTAACACACTGCATATACTGGCATTGTGGACTATC GGCAGGTGGCTTTGTCATTTGCCCAGGATTTCCAAGAAGCAGGTGGCTCTGTTTTGACCA GTTTTGAAGTAGAAGATATTGAAATGGCTAAAGAAAGCCCTTCAAGACATAAAGATGGGA TGAAATACCCGATTGTTATAAGGAATACTAAGGAAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACTGGGACTTGGGCAGTGCTGGGATCCAGGGCCGCTTCTGGGGCTTGAGGCAGGGTAGGA GTGGGGCACCGGTGATGGTGCCGGCGCTGCGTTACCTGGGCAGCGTCTACGGACGTGCCC GCGGGGCTTTCTCCGGAGGCTTCCTCGCTGCTGGCGCGCCCGCGCCAGGTGCCAAGGTGG CCGCAGAGCCAGCACCAGGTGCATTCTCTTAAAGCTCATTTGATGTAGTCATTATCGGTG GCGGAATTGTGGGGCTTGCCTCTGCCAGAGCCCTCATCCTGCGACATCCAGCACTTTCCA TTGGTGTTCTGGAAAAGGAGAAGGATTTAGCTATTCATCAGACTGGACATAACAGTGGTG TCATACATAGTGGAATTTATTATAAACCTGAATCTCTGAAAGCTAAATTATGTGTGCAAG GTGCAGCCCTCATCTATGAGTACTGTAACCAAAAGGGGATTTCCTACAAGCAATGTGGCA AGCTTATAGTAGCTGTTGAACAAGAAGAAATTCCCAGACTTCAGGCGTTATATGAGAGAG GCCTGCAGAATGGTGTTCAGGGCCTGAGGCTGATCCAGCAGGAGGATATAAAAAAGAAGG AACCATATTGTAGGGGTCTAATGGTTTAACACACTGCATATACTGGCATTGTGGACTATC GGCAGGTGGCTTTGTCATTTGCCCAGGATTTCCAAGAAGCAGGTGGCTCTGTTTTGACCA GTTTTGAAGTAGAAGATATTGAAATGGCTAAAGAAAGCCCTTCAAGACATAAAGATGGGA TGAAATACCCGATTGTTATAAGGAATACTAAGGAAT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 49 entry(ies) | More info |
| Aligned organism(s): 49 entry(ies) | Help | Less info |
| 2-169, gnl|bosTau2|chr10 (28725338-28725174) | |
| 2-169, gnl|canFam2|chr8 (29766581-29766785) | |
| 2-169, gnl|dasNov1|scaffold_70882 (39616-39804) | |
| 2-169, gnl|echTel1|scaffold_59887 (356-183) | |
| 2-169, gnl|hg17|chr14 (49848467-49848646) | |
| 2-169, gnl|Hg17|chr14 (49848686-49848524) | |
| 2-169, gnl|loxAfr1|scaffold_16076 (10315-10139) | |
| 2-169, gnl|mm7|chr12 (67665634-67665816) | |
| 2-169, gnl|Mm7|chr12 (67665858-67665694) | |
| 2-169, gnl|oryCun1|scaffold_208488 (159659-159797) | |
| 2-169, gnl|panTro1|chr15 (49262101-49262280) | |
| 2-169, gnl|rheMac2|chr7 (113375786-113375961) | |
| 2-169, gnl|rn3|chr6 (91775108-91775287) | |
| 328-482, gnl|bosTau2|chr10 (28718757-28718603) | |
| 328-482, gnl|canFam2|chr8 (29762495-29762675) | |
| 328-482, gnl|danRer3|chr13 (39342853-39343024) | |
| 328-482, gnl|dasNov1|scaffold_231120 (959-779) | |
| 328-482, gnl|echTel1|scaffold_284865 (1820-2016) | |
| 328-482, gnl|fr1|chrUn (2749026-2748848) | |
| 328-482, gnl|galGal2|chr5 (54465766-54465942) | |
| 328-482, gnl|hg17|chr14 (49838479-49838659) | |
| 328-482, gnl|Hg17|chr14 (49838639-49838485) | |
| 328-482, gnl|loxAfr1|scaffold_16076 (18297-18117) | |
| 328-482, gnl|mm7|chr12 (67662298-67662476) | |
| 328-482, gnl|Mm7|chr12 (67662458-67662304) | |
| 328-482, gnl|oryCun1|scaffold_16290 (1926-1746) | |
| 328-482, gnl|panTro1|chr15 (49252114-49252294) | |
| 328-482, gnl|rheMac2|chr7 (113365830-113366010) | |
| 328-482, gnl|rn3|chr6 (91771536-91771716) | |
| 328-482, gnl|tetNig1|chr10 (11309473-11309293) | |
| 328-482, gnl|xenTro1|scaffold_1266 (201668-201509) | |
| 614-778, gnl|bosTau2|chr10 (28695568-28695404) | |
| 614-778, gnl|canFam2|chr8 (29751798-29751977) | |
| 614-778, gnl|danRer3|chr13 (39339661-39339840) | |
| 614-778, gnl|dasNov1|scaffold_46639 (6772-6593) | |
| 614-778, gnl|echTel1|scaffold_276632 (43399-43578) | |
| 614-778, gnl|fr1|chrUn (2749484-2749309) | |
| 614-778, gnl|galGal2|chr5 (54461391-54461571) | |
| 614-778, gnl|hg17|chr14 (49820333-49820512) | |
| 614-778, gnl|Hg17|chr14 (49820502-49820338) | |
| 614-778, gnl|loxAfr1|scaffold_38492 (1106-927) | |
| 614-778, gnl|mm7|chr12 (67648110-67648289) | |
| 614-778, gnl|Mm7|chr12 (67648279-67648115) | |
| 614-778, gnl|oryCun1|scaffold_10602 (304-483) | |
| 614-778, gnl|panTro1|chr15 (49233910-49234089) | |
| 614-778, gnl|rheMac2|chr7 (113345154-113345333) | |
| 614-778, gnl|rn3|chr6 (91756247-91756426) | |
| 614-778, gnl|tetNig1|chr10 (11309906-11309738) | |
| 614-778, gnl|xenTro1|scaffold_1266 (205510-205331) |
| Aligned organism(s): 49 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-169, gnl|bosTau2|chr10 (28725338-28725174) | |
| 2-169, gnl|canFam2|chr8 (29766581-29766785) | |
| 2-169, gnl|dasNov1|scaffold_70882 (39616-39804) | |
| 2-169, gnl|echTel1|scaffold_59887 (356-183) | |
| 2-169, gnl|hg17|chr14 (49848467-49848646) | |
| 2-169, gnl|Hg17|chr14 (49848686-49848524) | |
| 2-169, gnl|loxAfr1|scaffold_16076 (10315-10139) | |
| 2-169, gnl|mm7|chr12 (67665634-67665816) | |
| 2-169, gnl|Mm7|chr12 (67665858-67665694) | |
| 2-169, gnl|oryCun1|scaffold_208488 (159659-159797) | |
| 2-169, gnl|panTro1|chr15 (49262101-49262280) | |
| 2-169, gnl|rheMac2|chr7 (113375786-113375961) | |
| 2-169, gnl|rn3|chr6 (91775108-91775287) | |
| 328-482, gnl|bosTau2|chr10 (28718757-28718603) | |
| 328-482, gnl|canFam2|chr8 (29762495-29762675) | |
| 328-482, gnl|danRer3|chr13 (39342853-39343024) | |
| 328-482, gnl|dasNov1|scaffold_231120 (959-779) | |
| 328-482, gnl|echTel1|scaffold_284865 (1820-2016) | |
| 328-482, gnl|fr1|chrUn (2749026-2748848) | |
| 328-482, gnl|galGal2|chr5 (54465766-54465942) | |
| 328-482, gnl|hg17|chr14 (49838479-49838659) | |
| 328-482, gnl|Hg17|chr14 (49838639-49838485) | |
| 328-482, gnl|loxAfr1|scaffold_16076 (18297-18117) | |
| 328-482, gnl|mm7|chr12 (67662298-67662476) | |
| 328-482, gnl|Mm7|chr12 (67662458-67662304) | |
| 328-482, gnl|oryCun1|scaffold_16290 (1926-1746) | |
| 328-482, gnl|panTro1|chr15 (49252114-49252294) | |
| 328-482, gnl|rheMac2|chr7 (113365830-113366010) | |
| 328-482, gnl|rn3|chr6 (91771536-91771716) | |
| 328-482, gnl|tetNig1|chr10 (11309473-11309293) | |
| 328-482, gnl|xenTro1|scaffold_1266 (201668-201509) | |
| 614-778, gnl|bosTau2|chr10 (28695568-28695404) | |
| 614-778, gnl|canFam2|chr8 (29751798-29751977) | |
| 614-778, gnl|danRer3|chr13 (39339661-39339840) | |
| 614-778, gnl|dasNov1|scaffold_46639 (6772-6593) | |
| 614-778, gnl|echTel1|scaffold_276632 (43399-43578) | |
| 614-778, gnl|fr1|chrUn (2749484-2749309) | |
| 614-778, gnl|galGal2|chr5 (54461391-54461571) | |
| 614-778, gnl|hg17|chr14 (49820333-49820512) | |
| 614-778, gnl|Hg17|chr14 (49820502-49820338) | |
| 614-778, gnl|loxAfr1|scaffold_38492 (1106-927) | |
| 614-778, gnl|mm7|chr12 (67648110-67648289) | |
| 614-778, gnl|Mm7|chr12 (67648279-67648115) | |
| 614-778, gnl|oryCun1|scaffold_10602 (304-483) | |
| 614-778, gnl|panTro1|chr15 (49233910-49234089) | |
| 614-778, gnl|rheMac2|chr7 (113345154-113345333) | |
| 614-778, gnl|rn3|chr6 (91756247-91756426) | |
| 614-778, gnl|tetNig1|chr10 (11309906-11309738) | |
| 614-778, gnl|xenTro1|scaffold_1266 (205510-205331) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ret (0.128733) | |
| bla (0.124347) |