Ss1.1-LyN1-MLN01B080003.5
|
AATTCGCACGTGGCCCTTTCGGAGGCACATTGTGTCTGCGAGCGCTGGTGTAACTGCTGG
CATTGCCTTTCCAGCTTCCAGTATGAAGCGGCCGAAGTTAAAGAAATCAAGTAAACGCAT
GACCTGCCATAAGCGGTATAAAATCCAAAAAAAGGTACGAGAGCACCATCGAAAATTGAG
GAAAGAGGCTAAAAAACGAGGTCGAAAGAAGCCTAGGAAAGACCCAGGAATTCCAAATAG
TGCTCCTTTTAAGGAGGCTCTTCTTCGGGAAGCTGAGCTAAGGAAACAGCGGCTTGAAGA
ACTGAAACAGCAGCAGAAACTTGAGAGGCAGAAGGAACAGGACAAGAAAAGAAAACTTGA
AACTAATCCTGGTGTTGAGCTGTCTCACAAGGTTCTTGTGAAAGAGGAATTTGGGCGATC
TAAAGCTAAGAAAGCCAAGTCAAGCAAACAGAATCCAAAGAAGTTGTACTGTCAGGAACT
TAAAAAGGTATCTTAGTCTAGGTCAGTGCCTAAAAATGGTAATGATGTTTGAAAGACTAT
TGTCATCTTTTTTTTTTTTTTCCTTATGACACCAACCTTGCAAAGGTAGAAGTAGGGTTC
TCTGGAGCTGGAAGACTCCTCCAGCAAGCTGGCTTACTCTGTTATGTTTGGCTGAAGGAC
ATATTCTTGTTTTAAATTTTTTCGTGGGAACAATTTACCGTAAGCATGATTTACAAAAGT
GGCATTTTATAAAGTAACATGTGTTGACACAGTGGTTTTTTAAATGTAGAACAATACATT |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AATTCGCACGTGGCCCTTTCGGAGGCACATTGTGTCTGCGAGCGCTGGTGTAACTGCTGG
CATTGCCTTTCCAGCTTCCAGTATGAAGCGGCCGAAGTTAAAGAAATCAAGTAAACGCAT
GACCTGCCATAAGCGGTATAAAATCCAAAAAAAGGTACGAGAGCACCATCGAAAATTGAG
GAAAGAGGCTAAAAAACGAGGTCGAAAGAAGCCTAGGAAAGACCCAGGAATTCCAAATAG
TGCTCCTTTTAAGGAGGCTCTTCTTCGGGAAGCTGAGCTAAGGAAACAGCGGCTTGAAGA
ACTGAAACAGCAGCAGAAACTTGAGAGGCAGAAGGAACAGGACAAGAAAAGAAAACTTGA
AACTAATCCTGGTGTTGAGCTGTCTCACAAGGTTCTTGTGAAAGAGGAATTTGGGCGATC
TAAAGCTAAGAAAGCCAAGTCAAGCAAACAGAATCCAAAGAAGTTGTACTGTCAGGAACT
TAAAAAGGTATCTTAGTCTAGGTCAGTGCCTAAAAATGGTAATGATGTTTGAAAGACTAT
TGTCATCTTTTTTTTTTTTTTCCTTATGACACCAACCTTGCAAAGGTAGAAGTAGGGTTC
TCTGGAGCTGGAAGACTCCTCCAGCAAGCTGGCTTACTCTGTTATGTTTGGCTGAAGGAC
ATATTCTTGTTTTAAATTTTTTCGTGGGAACAATTTACCGTAAGCATGATTTACAAAAGT
GGCATTTTATAAAGTAACATGTGTTGACACAGTGGTTTTTTAAATGTAGAACAATACATT |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
153-290, gnl|bosTau2|chr22 (42397546-42397683) |
|
153-290, gnl|canFam2|chr20 (40104663-40104499) |
|
153-290, gnl|danRer3|chrUn (135478977-135479150) |
|
153-290, gnl|dasNov1|scaffold_3990 (96986-97155) |
|
153-290, gnl|echTel1|scaffold_218056 (3510-3665) |
|
153-290, gnl|fr1|chrUn (75152432-75152588) |
|
153-290, gnl|galGal2|chr12 (669452-669611) |
|
153-290, gnl|hg17|chr3 (52696294-52696458) |
|
153-290, gnl|Hg17|chr3 (52696300-52696437) |
|
153-290, gnl|loxAfr1|scaffold_102 (140238-140076) |
|
153-290, gnl|mm7|chr14 (28447070-28446906) |
|
153-290, gnl|Mm7|chr14 (28447062-28446925) |
|
153-290, gnl|monDom2|scaffold_5 (70288188-70288033) |
|
153-290, gnl|oryCun1|scaffold_212982 (44302-44466) |
|
153-290, gnl|panTro1|chr2 (54315709-54315873) |
|
153-290, gnl|rheMac2|chr2 (83676662-83676499) |
|
153-290, gnl|rn3|chr16 (6449115-6448951) |
|
153-290, gnl|tetNig1|chr11 (8452728-8452873) |
| |
|
405-665, gnl|bosTau2|chr22 (42397989-42398244) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
153-290, gnl|bosTau2|chr22 (42397546-42397683) |
|
153-290, gnl|canFam2|chr20 (40104663-40104499) |
|
153-290, gnl|danRer3|chrUn (135478977-135479150) |
|
153-290, gnl|dasNov1|scaffold_3990 (96986-97155) |
|
153-290, gnl|echTel1|scaffold_218056 (3510-3665) |
|
153-290, gnl|fr1|chrUn (75152432-75152588) |
|
153-290, gnl|galGal2|chr12 (669452-669611) |
|
153-290, gnl|hg17|chr3 (52696294-52696458) |
|
153-290, gnl|Hg17|chr3 (52696300-52696437) |
|
153-290, gnl|loxAfr1|scaffold_102 (140238-140076) |
|
153-290, gnl|mm7|chr14 (28447070-28446906) |
|
153-290, gnl|Mm7|chr14 (28447062-28446925) |
|
153-290, gnl|monDom2|scaffold_5 (70288188-70288033) |
|
153-290, gnl|oryCun1|scaffold_212982 (44302-44466) |
|
153-290, gnl|panTro1|chr2 (54315709-54315873) |
|
153-290, gnl|rheMac2|chr2 (83676662-83676499) |
|
153-290, gnl|rn3|chr16 (6449115-6448951) |
|
153-290, gnl|tetNig1|chr11 (8452728-8452873) |
| |
|
405-665, gnl|bosTau2|chr22 (42397989-42398244) |
|
ece (0.229305) |
|
ste (0.135208) |
|
pgl (0.118483) |
|
ece (0.229305) |
|
ste (0.135208) |
|
pgl (0.118483) |
