Non-Coding RNA Search

Ss1.1-LyN1-MLN01B080040.5

Sequence:


               
               GACCAGCGTGATGGAGGATTGGCCGTCTAGGACTCTGGGGTGTGCTGCACAAGTCAGGAT
ATTAGGGGGCCGAGGCCGAGCGTGATGGAGGTCCCGGGATGTGGGGGTTCGGGGATAAGG
CTGGGAGGTTGGTGGAGAGAGGCGGGCGGGCTCGGAGACGTGTGGAAGGGAAGGGCGTGT
GGGGGAGGAGAAATAAGGACAAAGGGGCGGGGAGGAGGGTCGGGGGGCGCTGTTGGATCA
AATCCGGCAGGGAATCCAGCTGAACAAGACCCCTGGGGCCCCAGAGAGTTCAGCGCTGCA
GCCCCCACCTCAGAGCTCCGAGGGGCTGGTGGGGGCCCTGATGCACGTGATGCAGAAGAG
AAGCAAAGCCATTCACTCCTCCGACGAAGGGGAGGACCAGGCCGGTGATGACGATGACGA
CGATGAATGGGATGACTGAGTCACCGCCACCCTCACCTGCTCTGCACCTGCGCCCCTGGC
AGCCCTGCTGGCCGCCTTCCACTCTCAGCTTCCAGGCTCCCAAGCCCTGTTTCTTCGTCA
CTCACCCCTCCGATGCTGTTATCCCTGACTGCCCCCACCCTCACCACTCATCCCAGCAAG
AGCCAGGGACCTTTTCTACAAAACTTTTCAATTCCCCTTTCTCAAGAGCTTTTTTTTTTT
AAATAAAATATAGTTGGTTTAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACCAGCGTGATGGAGGATTGGCCGTCTAGGACTCTGGGGTGTGCTGCACAAGTCAGGAT
ATTAGGGGGCCGAGGCCGAGCGTGATGGAGGTCCCGGGATGTGGGGGTTCGGGGATAAGG
CTGGGAGGTTGGTGGAGAGAGGCGGGCGGGCTCGGAGACGTGTGGAAGGGAAGGGCGTGT
GGGGGAGGAGAAATAAGGACAAAGGGGCGGGGAGGAGGGTCGGGGGGCGCTGTTGGATCA
AATCCGGCAGGGAATCCAGCTGAACAAGACCCCTGGGGCCCCAGAGAGTTCAGCGCTGCA
GCCCCCACCTCAGAGCTCCGAGGGGCTGGTGGGGGCCCTGATGCACGTGATGCAGAAGAG
AAGCAAAGCCATTCACTCCTCCGACGAAGGGGAGGACCAGGCCGGTGATGACGATGACGA
CGATGAATGGGATGACTGAGTCACCGCCACCCTCACCTGCTCTGCACCTGCGCCCCTGGC
AGCCCTGCTGGCCGCCTTCCACTCTCAGCTTCCAGGCTCCCAAGCCCTGTTTCTTCGTCA
CTCACCCCTCCGATGCTGTTATCCCTGACTGCCCCCACCCTCACCACTCATCCCAGCAAG
AGCCAGGGACCTTTTCTACAAAACTTTTCAATTCCCCTTTCTCAAGAGCTTTTTTTTTTT
AAATAAAATATAGTTGGTTTAAAAAAAAAAAAAAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q9GLP4_PIG

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q9GLP4_PIG

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               378-670, gnl|bosTau2|chrX (25872499-25872792)
               

               
               378-670, gnl|Hg17|chrX (48305741-48306044)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               378-670, gnl|bosTau2|chrX (25872499-25872792)
               

               
               378-670, gnl|Hg17|chrX (48305741-48306044)

Expressed library(ies): 8 entry(ies)

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Expressed library(ies): 8 entry(ies)

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               cag (0.604778)
               

               
               fty (0.351679)
               

               
               hyp (0.142837)
               

               
               pty (0.142714)
               

               
               lnt (0.142308)
               

               
               med (0.116252)
               

               
               jca (0.11396)
               

               
               jej (0.0989218)

Expressed library(ies): 8 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cag (0.604778)
               

               
               fty (0.351679)
               

               
               hyp (0.142837)
               

               
               pty (0.142714)
               

               
               lnt (0.142308)
               

               
               med (0.116252)
               

               
               jca (0.11396)
               

               
               jej (0.0989218)

	378-670, gnl\|bosTau2\|chrX (25872499-25872792)
	378-670, gnl\|Hg17\|chrX (48305741-48306044)

	cag (0.604778)
	fty (0.351679)
	hyp (0.142837)
	pty (0.142714)
	lnt (0.142308)
	med (0.116252)
	jca (0.11396)
	jej (0.0989218)