Non-Coding RNA Search

Ss1.1-LyN1-MLN01C070089.5

Sequence:


               
               AACGTGGCCCTCTGGGAAGTCTACCAGTGGCAAAAGGGGCAGATGCAGAAGAGAAATGGG
GGGAAGGCGGTGGATGAGAGGCAGCTGTTCCACGGCACCAGCACCAGCTTAGTCGACGCC
ATCTGCCAGCAGAACTTTGACTGGCGGGTCAACGGTCTGCACGGGACTTCCTACGGCAAA
GGGAGCTACTTTGCCCGGGACGCCGCGTATTCCCACCACTACAGCAAGTCCAACACCAAG
TCCCACACCATGTTCCTGGCTCGGGTGCTGGTGGGCGAGTTTGTCCGAGGCAACACCAGC
TTCGTCCGCCCCCCGGCCAAGGAGGGCCAGGGCACCGTCCTGTATGACAGCTGCGTCAAC
AGCGTGTCCGACCCCAGCATCTTCGTGATCTTCGAGAAGCACCAGGCCTACCCAGAGTAC
GTCATCCAGTACACGGCCTTGACCAAGCCCATGCCCGCTGCCTCCAACCTGCTCTCCTTG
GCGTCCCTCTTCAGCGGCCGGCAGTGAGCGCCCCGATGTTTTTATGCTTTTTAGGCTCAT
CTTACTTGAAATGGTTGTTTGAAAGAGTTCTATTTTTTTTTTCTTTTTAAGCAAAGCAAC
TTTTAATGAACTGTTCCTTTAATATTGACTTCTTGATGAAGTTATACTCTTAATCTCTGG
CCAATGATATTTTCACTTTAAAGTCATTTTTGGGTTTGCTGGTGGACTCACTGGTCGCGA
TTATAGGCGAACCCCTTATTGCTCTTTAGTCGGGTGTGAAAGTTTTATTTTTTACTCTCT
CTTGACTTGGCTGCAGATTGGCACCAGGCAGAGTTTCCAGATACTATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACGTGGCCCTCTGGGAAGTCTACCAGTGGCAAAAGGGGCAGATGCAGAAGAGAAATGGG
GGGAAGGCGGTGGATGAGAGGCAGCTGTTCCACGGCACCAGCACCAGCTTAGTCGACGCC
ATCTGCCAGCAGAACTTTGACTGGCGGGTCAACGGTCTGCACGGGACTTCCTACGGCAAA
GGGAGCTACTTTGCCCGGGACGCCGCGTATTCCCACCACTACAGCAAGTCCAACACCAAG
TCCCACACCATGTTCCTGGCTCGGGTGCTGGTGGGCGAGTTTGTCCGAGGCAACACCAGC
TTCGTCCGCCCCCCGGCCAAGGAGGGCCAGGGCACCGTCCTGTATGACAGCTGCGTCAAC
AGCGTGTCCGACCCCAGCATCTTCGTGATCTTCGAGAAGCACCAGGCCTACCCAGAGTAC
GTCATCCAGTACACGGCCTTGACCAAGCCCATGCCCGCTGCCTCCAACCTGCTCTCCTTG
GCGTCCCTCTTCAGCGGCCGGCAGTGAGCGCCCCGATGTTTTTATGCTTTTTAGGCTCAT
CTTACTTGAAATGGTTGTTTGAAAGAGTTCTATTTTTTTTTTCTTTTTAAGCAAAGCAAC
TTTTAATGAACTGTTCCTTTAATATTGACTTCTTGATGAAGTTATACTCTTAATCTCTGG
CCAATGATATTTTCACTTTAAAGTCATTTTTGGGTTTGCTGGTGGACTCACTGGTCGCGA
TTATAGGCGAACCCCTTATTGCTCTTTAGTCGGGTGTGAAAGTTTTATTTTTTACTCTCT
CTTGACTTGGCTGCAGATTGGCACCAGGCAGAGTTTCCAGATACTATT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q7Z2T1_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q7Z2T1_HUMAN

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               180-828, gnl|bosTau2|chr4 (57127762-57127122)
               

               
               180-828, gnl|Hg17|chr7 (139177871-139177230)
               

               
               180-828, gnl|Mm7|chr6 (39018567-39017725)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               180-828, gnl|bosTau2|chr4 (57127762-57127122)
               

               
               180-828, gnl|Hg17|chr7 (139177871-139177230)
               

               
               180-828, gnl|Mm7|chr6 (39018567-39017725)

Expressed library(ies): 8 entry(ies)

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Expressed library(ies): 8 entry(ies)

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               cbl (0.803582)
               

               
               ill (0.175593)
               

               
               mcp (0.170648)
               

               
               hyp (0.142837)
               

               
               lnt (0.142308)
               

               
               cov (0.132153)
               

               
               clu (0.119646)
               

               
               jca (0.11396)

Expressed library(ies): 8 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.803582)
               

               
               ill (0.175593)
               

               
               mcp (0.170648)
               

               
               hyp (0.142837)
               

               
               lnt (0.142308)
               

               
               cov (0.132153)
               

               
               clu (0.119646)
               

               
               jca (0.11396)

	180-828, gnl\|bosTau2\|chr4 (57127762-57127122)
	180-828, gnl\|Hg17\|chr7 (139177871-139177230)
	180-828, gnl\|Mm7\|chr6 (39018567-39017725)

	cbl (0.803582)
	ill (0.175593)
	mcp (0.170648)
	hyp (0.142837)
	lnt (0.142308)
	cov (0.132153)
	clu (0.119646)
	jca (0.11396)