Ss1.1-LyN1-MLN01C120038.5
|
CGCGCGTTTGTGGAGGTTGGGTGTTTTCTGGGCCTGCGCGCCCAACGCGGATTTCTGAGG
CCGGGGCTGCAACCGAGGACGCCAACGGAGACCCGTGCGCAGAGCGGGCACAGGGAAACT
ACATCACATCTACCAGATTTCATATGGTCAGAAGTCTGTTTAAAGCAAAGGACAAGTGAC
AATTTTGAGAGGAGCTTGGAGAATATATATCAAGATGGATTCTCACAATTGTACAACAGT
TTCTGATTCAGCTTTGGAAATTGAGAATCAAAGTGACAGCTCTTCCTCTGGAAGCAGCTT
ATTTAAAACTCAGTGTGTTCCTAATCCACCTAATCCACCTAAACAGAGGCAAAGAAACCC
TATTAGAAAATATATTTACTCACCTGTAAGTATTGATACAGAAGATTCATCTAGTGACTC
ATCTATAGAACCAAGACCATTGACTTTAAAAGCTATTTTTGAAAGATTCAAAAGAAAGAA
ACGTAAGAAGAAGAAGAAGAAGAAGAAATACAAGCCAACTGGAAGATCAAGGGGAAGACC
AAAAGGAAGGAAAAACACTAGAGTCTCACAAATAAATAAGATAAAATTTAAAGACAAAGG
GCCTGGTTTCCCATTTTTAGAAGCAGAAAATGGAAGAAAACCATTACCTTGGAGAAAAAT
TTTAACCTTTGAGCAAGCAGTGGCAAGAGGATTTTTTAACTACCTTGAAAAATTGAAGTA
TGAATACCACCTCAAAGAATCCTTGAAACAAATGAATGTTGGTGAAGATTTAGAAAGAGA
AGACCTTGATAGTCGTAGGTACAAATACTTGGATGATGATGGATCTATCTCTCCTATTGA
AGAGTTAACAGCAGAGGAGGAAAATGCAACAAATCTTGAACATGATGAATGTGATATTAA
ATTAGTGGAGAATAATTATTTCATAATAAGTTCTGAATTACCAAAGAAGAAGAATGTGTA
TTTGAAACAAGAGGAGTATACCGAAGAAGCTGCTTTGCCTAAAAAGAAAGCATCAAAATC
CAAAAAACAAAACAGTGGACAGAGGACAGAATGCCTTGAAAAGGAAATAGGAATGTGAAT
TCCTGACAAGGTAAACAGAATCAAGAAAAGGCAACTTTTTATAGGAAGTAAAAATGAAAA
ATGAGAATGTATATTGCCAGCCTAATGATAAAGAACCTTGTAAGAAAATAAAAACTTTGA
ACAAAAAAAAAATAATGCATGTTTAGAAGGTGTCTAAAATTCACAACCAGGCAGATACAT
CTCTTCTGACCCTAAACATGACCCTACCTAAAGTGA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CGCGCGTTTGTGGAGGTTGGGTGTTTTCTGGGCCTGCGCGCCCAACGCGGATTTCTGAGG
CCGGGGCTGCAACCGAGGACGCCAACGGAGACCCGTGCGCAGAGCGGGCACAGGGAAACT
ACATCACATCTACCAGATTTCATATGGTCAGAAGTCTGTTTAAAGCAAAGGACAAGTGAC
AATTTTGAGAGGAGCTTGGAGAATATATATCAAGATGGATTCTCACAATTGTACAACAGT
TTCTGATTCAGCTTTGGAAATTGAGAATCAAAGTGACAGCTCTTCCTCTGGAAGCAGCTT
ATTTAAAACTCAGTGTGTTCCTAATCCACCTAATCCACCTAAACAGAGGCAAAGAAACCC
TATTAGAAAATATATTTACTCACCTGTAAGTATTGATACAGAAGATTCATCTAGTGACTC
ATCTATAGAACCAAGACCATTGACTTTAAAAGCTATTTTTGAAAGATTCAAAAGAAAGAA
ACGTAAGAAGAAGAAGAAGAAGAAGAAATACAAGCCAACTGGAAGATCAAGGGGAAGACC
AAAAGGAAGGAAAAACACTAGAGTCTCACAAATAAATAAGATAAAATTTAAAGACAAAGG
GCCTGGTTTCCCATTTTTAGAAGCAGAAAATGGAAGAAAACCATTACCTTGGAGAAAAAT
TTTAACCTTTGAGCAAGCAGTGGCAAGAGGATTTTTTAACTACCTTGAAAAATTGAAGTA
TGAATACCACCTCAAAGAATCCTTGAAACAAATGAATGTTGGTGAAGATTTAGAAAGAGA
AGACCTTGATAGTCGTAGGTACAAATACTTGGATGATGATGGATCTATCTCTCCTATTGA
AGAGTTAACAGCAGAGGAGGAAAATGCAACAAATCTTGAACATGATGAATGTGATATTAA
ATTAGTGGAGAATAATTATTTCATAATAAGTTCTGAATTACCAAAGAAGAAGAATGTGTA
TTTGAAACAAGAGGAGTATACCGAAGAAGCTGCTTTGCCTAAAAAGAAAGCATCAAAATC
CAAAAAACAAAACAGTGGACAGAGGACAGAATGCCTTGAAAAGGAAATAGGAATGTGAAT
TCCTGACAAGGTAAACAGAATCAAGAAAAGGCAACTTTTTATAGGAAGTAAAAATGAAAA
ATGAGAATGTATATTGCCAGCCTAATGATAAAGAACCTTGTAAGAAAATAAAAACTTTGA
ACAAAAAAAAAATAATGCATGTTTAGAAGGTGTCTAAAATTCACAACCAGGCAGATACAT
CTCTTCTGACCCTAAACATGACCCTACCTAAAGTGA
|
|
gi|61834489|ref|XP_581831.1| |
Protein identifier
|
gi|61834489|ref|XP_581831.1| |
|
272-673, gnl|bosTau2|chr29 (555411-555025) |
|
272-673, gnl|canFam2|chr21 (10014713-10014264) |
|
272-673, gnl|dasNov1|scaffold_2894 (22991-23431) |
|
272-673, gnl|echTel1|scaffold_316886 (18017-17571) |
|
272-673, gnl|hg17|chr11 (93110859-93111323) |
|
272-673, gnl|Hg17|chr11 (93111315-93110923) |
|
272-673, gnl|mm7|chr9 (15147583-15147123) |
|
272-673, gnl|Mm7|chr9 (15147129-15147521) |
|
272-673, gnl|monDom2|scaffold_15 (4125525-4125067) |
|
272-673, gnl|oryCun1|scaffold_94908 (4207-4657) |
|
272-673, gnl|panTro1|chr9 (95012661-95013122) |
|
272-673, gnl|rheMac2|chr14 (92300292-92300755) |
|
272-673, gnl|rn3|chr8 (12109736-12109288) |
| |
|
907-1192, gnl|bosTau2|chr29 (552213-551923) |
|
907-1192, gnl|Hg17|chr11 (93109119-93108842) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
272-673, gnl|bosTau2|chr29 (555411-555025) |
|
272-673, gnl|canFam2|chr21 (10014713-10014264) |
|
272-673, gnl|dasNov1|scaffold_2894 (22991-23431) |
|
272-673, gnl|echTel1|scaffold_316886 (18017-17571) |
|
272-673, gnl|hg17|chr11 (93110859-93111323) |
|
272-673, gnl|Hg17|chr11 (93111315-93110923) |
|
272-673, gnl|mm7|chr9 (15147583-15147123) |
|
272-673, gnl|Mm7|chr9 (15147129-15147521) |
|
272-673, gnl|monDom2|scaffold_15 (4125525-4125067) |
|
272-673, gnl|oryCun1|scaffold_94908 (4207-4657) |
|
272-673, gnl|panTro1|chr9 (95012661-95013122) |
|
272-673, gnl|rheMac2|chr14 (92300292-92300755) |
|
272-673, gnl|rn3|chr8 (12109736-12109288) |
| |
|
907-1192, gnl|bosTau2|chr29 (552213-551923) |
|
907-1192, gnl|Hg17|chr11 (93109119-93108842) |
|
mgp (0.692042) |
|
tes (0.415628) |
|
lyg (0.399308) |
|
nmm (0.398406) |
|
sme (0.305437) |
|
liv (0.292569) |
|
lin (0.291206) |
|
mas (0.210305) |
|
cty (0.20816) |
|
aor (0.195274) |
|
nep (0.183925) |
|
sag (0.182715) |
|
fty (0.17584) |
|
nje (0.16592) |
|
fco (0.157208) |
|
tbr (0.154178) |
|
isp (0.150376) |
|
ski (0.146735) |
|
spl (0.143184) |
|
lnt (0.142308) |
|
sug (0.127291) |
|
ese (0.126502) |
|
tra (0.123092) |
|
eep (0.122564) |
|
ebs (0.118301) |
|
cbl (0.114797) |
|
jej (0.0989218) |
|
mgp (0.692042) |
|
tes (0.415628) |
|
lyg (0.399308) |
|
nmm (0.398406) |
|
sme (0.305437) |
|
liv (0.292569) |
|
lin (0.291206) |
|
mas (0.210305) |
|
cty (0.20816) |
|
aor (0.195274) |
|
nep (0.183925) |
|
sag (0.182715) |
|
fty (0.17584) |
|
nje (0.16592) |
|
fco (0.157208) |
|
tbr (0.154178) |
|
isp (0.150376) |
|
ski (0.146735) |
|
spl (0.143184) |
|
lnt (0.142308) |
|
sug (0.127291) |
|
ese (0.126502) |
|
tra (0.123092) |
|
eep (0.122564) |
|
ebs (0.118301) |
|
cbl (0.114797) |
|
jej (0.0989218) |
