Ss1.1-LyN1-MLN01D050068.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTTTCTTCTACTTAGCTACCTAACTTCTCCAAACCACAGGACTGGTCTATGTTATAGTC CTGGTCACCCTCAGACGCTCATGTTGCAGCTACTGGAATTCCGGAGGTGAGCGCTGCAGC TGCTGATCAGGCCCATTTCCAGATTCTCCAGGAAGGGAGCAAAGCGGGAGGCGACATGCT CCTTTATCTTCCACTGGCTGAATGCCAAAATCTTTCACACTACCAGTCTCTGCGAATTCC AGGTAGAAGTAGCCACACTTGACTGCCCGGTGCACCTCAAAGCAGAAGCCCAAACAAGAA TCCTCTATCAGGTCTACGTATATCTCCTGAGCGATGGCCTCTAGCTTGTTAGTATCCAGG TTAGCCAACGAAATTTCCTCCATTTTAATCTGTAAACGACCGTGCAGAGGACGCTCGGAT TACTCACAGCTGCACCGGCGGCAACACGTCTGCTCAGCGGGCCGCGCCTAGGCCTACAGG CCTGTCAGGGCCGCGTCTTCGGCGGCGAGGGCGGAGGCTTCTGCGGCGGCAGAGGCAGGG CAGCAGCAGCCAGCGGCGACTGCTCTGACCTCAAGTTCTTCCGCGGCTTTCGGTGTCTCC TCGACTCTGGGACTTTGAGCTCGGGCTGGCCCGGGACTCACCACCGCCAAACGGTCTCGG CGCCTCACCCACCGGCCCAGACCTCTTCCGCTCGCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTTTCTTCTACTTAGCTACCTAACTTCTCCAAACCACAGGACTGGTCTATGTTATAGTC CTGGTCACCCTCAGACGCTCATGTTGCAGCTACTGGAATTCCGGAGGTGAGCGCTGCAGC TGCTGATCAGGCCCATTTCCAGATTCTCCAGGAAGGGAGCAAAGCGGGAGGCGACATGCT CCTTTATCTTCCACTGGCTGAATGCCAAAATCTTTCACACTACCAGTCTCTGCGAATTCC AGGTAGAAGTAGCCACACTTGACTGCCCGGTGCACCTCAAAGCAGAAGCCCAAACAAGAA TCCTCTATCAGGTCTACGTATATCTCCTGAGCGATGGCCTCTAGCTTGTTAGTATCCAGG TTAGCCAACGAAATTTCCTCCATTTTAATCTGTAAACGACCGTGCAGAGGACGCTCGGAT TACTCACAGCTGCACCGGCGGCAACACGTCTGCTCAGCGGGCCGCGCCTAGGCCTACAGG CCTGTCAGGGCCGCGTCTTCGGCGGCGAGGGCGGAGGCTTCTGCGGCGGCAGAGGCAGGG CAGCAGCAGCCAGCGGCGACTGCTCTGACCTCAAGTTCTTCCGCGGCTTTCGGTGTCTCC TCGACTCTGGGACTTTGAGCTCGGGCTGGCCCGGGACTCACCACCGCCAAACGGTCTCGG CGCCTCACCCACCGGCCCAGACCTCTTCCGCTCGCT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 3-696, gnl|bosTau2|chr25 (29770037-29769342) | |
| 3-696, gnl|Hg17|chr12 (73218536-73217864) | |
| 3-696, gnl|Mm7|chr10 (112434621-112435286) | |
| 205-340, gnl|bosTau2|chr19 (38098578-38098443) | |
| 205-340, gnl|canFam2|chr9 (22518618-22518488) | |
| 205-340, gnl|danRer3|chr3 (10865074-10864944) | |
| 205-340, gnl|dasNov1|scaffold_69929 (6156-6280) | |
| 205-340, gnl|echTel1|scaffold_289161 (42780-42650) | |
| 205-340, gnl|fr1|chrUn (38972469-38972339) | |
| 205-340, gnl|Hg17|chr17 (39630491-39630626) | |
| 205-340, gnl|hg17|chrX (65059270-65059400) | |
| 205-340, gnl|loxAfr1|scaffold_24462 (29507-29637) | |
| 205-340, gnl|mm7|chr11 (102403551-102403681) | |
| 205-340, gnl|Mm7|chr11 (102403548-102403683) | |
| 205-340, gnl|monDom2|scaffold_18 (42611981-42611847) | |
| 205-340, gnl|oryCun1|scaffold_198201 (7674-7544) | |
| 205-340, gnl|panTro1|chrX (66845912-66846042) | |
| 205-340, gnl|rheMac2|chrX (64602098-64602228) | |
| 205-340, gnl|rn3|chr10 (91388534-91388664) | |
| 205-340, gnl|tetNig1|chrUn_random (102222657-102222787) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-696, gnl|bosTau2|chr25 (29770037-29769342) | |
| 3-696, gnl|Hg17|chr12 (73218536-73217864) | |
| 3-696, gnl|Mm7|chr10 (112434621-112435286) | |
| 205-340, gnl|bosTau2|chr19 (38098578-38098443) | |
| 205-340, gnl|canFam2|chr9 (22518618-22518488) | |
| 205-340, gnl|danRer3|chr3 (10865074-10864944) | |
| 205-340, gnl|dasNov1|scaffold_69929 (6156-6280) | |
| 205-340, gnl|echTel1|scaffold_289161 (42780-42650) | |
| 205-340, gnl|fr1|chrUn (38972469-38972339) | |
| 205-340, gnl|Hg17|chr17 (39630491-39630626) | |
| 205-340, gnl|hg17|chrX (65059270-65059400) | |
| 205-340, gnl|loxAfr1|scaffold_24462 (29507-29637) | |
| 205-340, gnl|mm7|chr11 (102403551-102403681) | |
| 205-340, gnl|Mm7|chr11 (102403548-102403683) | |
| 205-340, gnl|monDom2|scaffold_18 (42611981-42611847) | |
| 205-340, gnl|oryCun1|scaffold_198201 (7674-7544) | |
| 205-340, gnl|panTro1|chrX (66845912-66846042) | |
| 205-340, gnl|rheMac2|chrX (64602098-64602228) | |
| 205-340, gnl|rn3|chr10 (91388534-91388664) | |
| 205-340, gnl|tetNig1|chrUn_random (102222657-102222787) |
| Expressed library(ies): 26 entry(ies) | More info |
| Expressed library(ies): 26 entry(ies) | Help | Less info |
| ebs (0.94641) | |
| pgl (0.7109) | |
| cut (0.679694) | |
| bla (0.621736) | |
| ece (0.45861) | |
| cst (0.420109) | |
| cbr (0.383926) | |
| cki (0.330469) | |
| pty (0.285429) | |
| csk (0.281492) | |
| che (0.272628) | |
| fce (0.271592) | |
| ova (0.258264) | |
| ese (0.253004) | |
| ecc (0.23007) | |
| jej (0.197844) | |
| aor (0.195274) | |
| rec (0.17307) | |
| mcp (0.170648) | |
| eli (0.151814) | |
| lun (0.150489) | |
| ste (0.135208) | |
| nmm (0.132802) | |
| eep (0.122564) | |
| eru (0.120048) | |
| ldo (0.0970026) |
| Expressed library(ies): 26 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ebs (0.94641) | |
| pgl (0.7109) | |
| cut (0.679694) | |
| bla (0.621736) | |
| ece (0.45861) | |
| cst (0.420109) | |
| cbr (0.383926) | |
| cki (0.330469) | |
| pty (0.285429) | |
| csk (0.281492) | |
| che (0.272628) | |
| fce (0.271592) | |
| ova (0.258264) | |
| ese (0.253004) | |
| ecc (0.23007) | |
| jej (0.197844) | |
| aor (0.195274) | |
| rec (0.17307) | |
| mcp (0.170648) | |
| eli (0.151814) | |
| lun (0.150489) | |
| ste (0.135208) | |
| nmm (0.132802) | |
| eep (0.122564) | |
| eru (0.120048) | |
| ldo (0.0970026) |