Non-Coding RNA Search

Ss1.1-LyN1-MLN01D070079.5

Sequence:


               
               AAATATTCAACATGGTTTATAAATATTCACTCCAAGTAACTTGAGAATTTATCTTTCTGG
TGAGAATTTCTTTTCTAATATCTTTAGTTGATTTTTTTCTAATTAATTGAAAACTATATG
AGACCTATTAGCTTTACTCTGCCTCATGACCACTGACTTCATCTCTAACCGAGACAGCCC
GTTATATCTGCAAGCCTTTAGTTATATGGAGGGACTTAATGAAAGAGAAACTGTAGTTCA
CCAGCTTTGTTAGAAAAATAACTCAGAATATACAGCCTAGCAAATGAGTTAGTAGAATCT
CATAAAACATATTAAAAAAGGGTTTTTTTCTGTATTTGGGTCACTAGACCAAGTCATGAG
GATAATGTTCATAATGTAGTGAATATCAGAATAATACTTAGAATATCATTTCTGAATTGT
CTCAGTACTCTAATTTTTTAATCCCCGTTTATTTTCATGTCATTCTAGCCTCATTAATAA
AATTCTATTTTTACTCCACTATCTCTTTCAGAAAATTTTAAAAAATCATTTTGTGTCTAG
ATTAAATGCTTATGGAAAAGTGCCTTTTTACCATGATTATGTTCCTTTCTTAGAGTTTTA
TTTTTCACTGTTGCCAAAAACACAGAGACAAATGACTTTAATCGTCCCAACTTTCATTTT
TTCTATTTAGTCATTCTTGTCTCCATTTCATGATTACCATAGAAAACAACTTCATAACTT
CCTAACTCCCTTTGACATAAGAGGAACAGAAAAGACACATAACTAGGGAGTTCCCGTTGT
GGCGAAGCAGAAGCGAATCCAACTAGGAACCATGAGGTTGCAGGTTCGATCCCTGGCCTC
ACTCAGTGGGTTAAGGATCCATCCGTGAGCTGGGGTGTAGGTCAAAAACGTAGCTCGAAT
CCTGCGTTGCTATAGCTGTGGTGTAGGCCGGTAGCTGTAGCTCTGATTCAACCCCTAGCC
TGGGAACCTCCATGTGCCACAGGTGCAGCCGTAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAATATTCAACATGGTTTATAAATATTCACTCCAAGTAACTTGAGAATTTATCTTTCTGG
TGAGAATTTCTTTTCTAATATCTTTAGTTGATTTTTTTCTAATTAATTGAAAACTATATG
AGACCTATTAGCTTTACTCTGCCTCATGACCACTGACTTCATCTCTAACCGAGACAGCCC
GTTATATCTGCAAGCCTTTAGTTATATGGAGGGACTTAATGAAAGAGAAACTGTAGTTCA
CCAGCTTTGTTAGAAAAATAACTCAGAATATACAGCCTAGCAAATGAGTTAGTAGAATCT
CATAAAACATATTAAAAAAGGGTTTTTTTCTGTATTTGGGTCACTAGACCAAGTCATGAG
GATAATGTTCATAATGTAGTGAATATCAGAATAATACTTAGAATATCATTTCTGAATTGT
CTCAGTACTCTAATTTTTTAATCCCCGTTTATTTTCATGTCATTCTAGCCTCATTAATAA
AATTCTATTTTTACTCCACTATCTCTTTCAGAAAATTTTAAAAAATCATTTTGTGTCTAG
ATTAAATGCTTATGGAAAAGTGCCTTTTTACCATGATTATGTTCCTTTCTTAGAGTTTTA
TTTTTCACTGTTGCCAAAAACACAGAGACAAATGACTTTAATCGTCCCAACTTTCATTTT
TTCTATTTAGTCATTCTTGTCTCCATTTCATGATTACCATAGAAAACAACTTCATAACTT
CCTAACTCCCTTTGACATAAGAGGAACAGAAAAGACACATAACTAGGGAGTTCCCGTTGT
GGCGAAGCAGAAGCGAATCCAACTAGGAACCATGAGGTTGCAGGTTCGATCCCTGGCCTC
ACTCAGTGGGTTAAGGATCCATCCGTGAGCTGGGGTGTAGGTCAAAAACGTAGCTCGAAT
CCTGCGTTGCTATAGCTGTGGTGTAGGCCGGTAGCTGTAGCTCTGATTCAACCCCTAGCC
TGGGAACCTCCATGTGCCACAGGTGCAGCCGTAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               2-767, gnl|bosTau2|chr18 (30316366-30317158)
               

               
               2-767, gnl|Hg17|chr16 (68291928-68292944)
               

               
               2-767, gnl|Mm7|chr8 (105975770-105976643)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-767, gnl|bosTau2|chr18 (30316366-30317158)
               

               
               2-767, gnl|Hg17|chr16 (68291928-68292944)
               

               
               2-767, gnl|Mm7|chr8 (105975770-105976643)

Expressed library(ies): 8 entry(ies)

More info

Expressed library(ies): 8 entry(ies)

Help | Less info


               
               mgp (0.230681)
               

               
               hea (0.204499)
               

               
               sto (0.179824)
               

               
               cki (0.165235)
               

               
               thg (0.126791)
               

               
               pgl (0.118483)
               

               
               ebs (0.118301)
               

               
               cbl (0.114797)

Expressed library(ies): 8 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mgp (0.230681)
               

               
               hea (0.204499)
               

               
               sto (0.179824)
               

               
               cki (0.165235)
               

               
               thg (0.126791)
               

               
               pgl (0.118483)
               

               
               ebs (0.118301)
               

               
               cbl (0.114797)

	2-767, gnl\|bosTau2\|chr18 (30316366-30317158)
	2-767, gnl\|Hg17\|chr16 (68291928-68292944)
	2-767, gnl\|Mm7\|chr8 (105975770-105976643)

	mgp (0.230681)
	hea (0.204499)
	sto (0.179824)
	cki (0.165235)
	thg (0.126791)
	pgl (0.118483)
	ebs (0.118301)
	cbl (0.114797)