Non-Coding RNA Search

Ss1.1-LyN1-MLN01D100051.5

Sequence:


               
               TCCTCGCCCCGGTAGCGGCGGAATGGAAAGCTAAAGGCCTTTAAAGACCTGGAATCTCCT
GGTTTCGGGAGGTGGTGAGGGGTGTGTGGCTCTGAGCTGCGAGGACAGTAAAGGACAATA
AAGAGCCTGTGGGCAAGAGGCTCTCCGAGTCCAGAGATCGTAGCTTTCGAGGTGCGGGTT
AGGGACCGTGGCCAAACGCGCTGGGCGGCTTCTGGTGGCGACCGAGTTTTCCCGTTACAG
GAAGTTGGGCCTGGCCTCTAGGAAAGAGAGGGGAAGGAGGAAAGAGAAAACGGCCTCCCG
CCCCCCGGGTGGCTGTTCCACCCACTGAGTTGAATGTAGCGGCCCGGGAGGTACTGGGCC
CCTCGACGGGTGAGACGAGGAGGAGCACGATCCAGACTGTTCGAGAGAAACGGAGAGGTG
GGAGGCCGAACTATCTCCATCCATACCCAGTTTCTCCAGGCAAGGGCTTTATTTCTTAAC
GTAGTTACAGAGAAACTGAAGCCACTTTTGGCATGTCGCTCTTTGAGCAAAGAGGCGTGC
ACGTCCTTTCCCGGTAGAACGTGATGGGTGGTGGCGGAGGAAAAACCCAGGCTGAGTGTT
TATTTTCGTCACACCAGGGAAAGCGATTCACGCCTTGTCCTTGCTGCTCACTGCTCCTCC
GTGCACCTCTCTCCATCTCTTAAGGCTCTTGGCTTTCTTTTTTGCTTGTTTCTCTATGTC
GTTTCTAGTTTCACCAGAAATCTTTCATCTAGCTGACCTGACACAGAGTCAAACCTCCAT
TCCCTTCACACTCTTAGAGAGCTTTTGTGCCTTCACATTTTGCTTGCAAATATCTCTGCA
TCATGTCTTTTAACTGCTTTAATGTCCTCATCTTATTTGGGGGAAATGTCAAAAACTCAA
AAATGTTTTCGTAACAGTATAAAAATAAATAATTCATTCAAGATGTATTTCCCTTAACGC
CATGTTAACATTTTAGTTGTTTTCCCCTTAGAGCTGAGTTGTAGAACTACAGTAGCAGTT
GATATAAAGCCTACTTAGATATACTACAGATGATCTTGCGCCTCCAAATAACCTCCTTAA
ATATAGTTGATGTTCATTGTTGGAATTAATTTCTCAATTGCAACATTGCTTAGTTTCTCC
TCCGTTAGCCTTCAAGAGTTCCCTGGTGGCCTCACAGTTAAGGATCTGGCAATTTCACTG
CTATGGCTCAGGGCACTGCTGTGGCATGGGTTGGAAACCTGGTCCAGGAACTACTGCATG
TCCTGGCCTATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCTCGCCCCGGTAGCGGCGGAATGGAAAGCTAAAGGCCTTTAAAGACCTGGAATCTCCT
GGTTTCGGGAGGTGGTGAGGGGTGTGTGGCTCTGAGCTGCGAGGACAGTAAAGGACAATA
AAGAGCCTGTGGGCAAGAGGCTCTCCGAGTCCAGAGATCGTAGCTTTCGAGGTGCGGGTT
AGGGACCGTGGCCAAACGCGCTGGGCGGCTTCTGGTGGCGACCGAGTTTTCCCGTTACAG
GAAGTTGGGCCTGGCCTCTAGGAAAGAGAGGGGAAGGAGGAAAGAGAAAACGGCCTCCCG
CCCCCCGGGTGGCTGTTCCACCCACTGAGTTGAATGTAGCGGCCCGGGAGGTACTGGGCC
CCTCGACGGGTGAGACGAGGAGGAGCACGATCCAGACTGTTCGAGAGAAACGGAGAGGTG
GGAGGCCGAACTATCTCCATCCATACCCAGTTTCTCCAGGCAAGGGCTTTATTTCTTAAC
GTAGTTACAGAGAAACTGAAGCCACTTTTGGCATGTCGCTCTTTGAGCAAAGAGGCGTGC
ACGTCCTTTCCCGGTAGAACGTGATGGGTGGTGGCGGAGGAAAAACCCAGGCTGAGTGTT
TATTTTCGTCACACCAGGGAAAGCGATTCACGCCTTGTCCTTGCTGCTCACTGCTCCTCC
GTGCACCTCTCTCCATCTCTTAAGGCTCTTGGCTTTCTTTTTTGCTTGTTTCTCTATGTC
GTTTCTAGTTTCACCAGAAATCTTTCATCTAGCTGACCTGACACAGAGTCAAACCTCCAT
TCCCTTCACACTCTTAGAGAGCTTTTGTGCCTTCACATTTTGCTTGCAAATATCTCTGCA
TCATGTCTTTTAACTGCTTTAATGTCCTCATCTTATTTGGGGGAAATGTCAAAAACTCAA
AAATGTTTTCGTAACAGTATAAAAATAAATAATTCATTCAAGATGTATTTCCCTTAACGC
CATGTTAACATTTTAGTTGTTTTCCCCTTAGAGCTGAGTTGTAGAACTACAGTAGCAGTT
GATATAAAGCCTACTTAGATATACTACAGATGATCTTGCGCCTCCAAATAACCTCCTTAA
ATATAGTTGATGTTCATTGTTGGAATTAATTTCTCAATTGCAACATTGCTTAGTTTCTCC
TCCGTTAGCCTTCAAGAGTTCCCTGGTGGCCTCACAGTTAAGGATCTGGCAATTTCACTG
CTATGGCTCAGGGCACTGCTGTGGCATGGGTTGGAAACCTGGTCCAGGAACTACTGCATG
TCCTGGCCTATC

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               1-1082, gnl|bosTau2|chr4 (1022316-1021244)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-1082, gnl|bosTau2|chr4 (1022316-1021244)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               mga (0.160205)
               

               
               thg (0.126791)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mga (0.160205)
               

               
               thg (0.126791)