Ss1.1-LyN1-MLN01E010038.5
|
CATCTACCTCTTCCCCGGCACCTTAAGATCCCGGGATATGAGCCGGAAGAGGCATCGCCT
GGTCCCAGAGACCCTTGGACTGAAGAGACCGCGAGAAAGACGGGATGTAGAGGCAGATCC
TTTGCGCGGCGAGTCAGGATCTGCGCGCGCGGCAGTCGCGGAGCTAGTGCGGCTGTTCCC
GCGAGTCCTGTTTGAGGATGCGCTACCGCCCATCGTGCTGAGGAACCAGGTGTACAGTCT
CGTGCCGGACCGGACGGTGGCTGACCGGCAGCTGAAGGCACTTCAAGAGCAGGGGGAGAT
CAGAATCATCCAGCTAGGCTTCGACTTGGACGCACAAGGAATTATCTTCACCGAGGACTA
CAGGACCAGAGTCCTCAAGGCTTGCGAGGGCCGCCCCTATGCTGGCACAGTGCAGAAGTT
CCTGGCTTCGGTGCTTCCAGCCTGTGGCGACCTTAGCTTCCAGCAGGACCAAATGACACA
GACTTTTGGCTTCAGGGATCCGGAGATCACGCAGCTGGTGAATGCCGGGGTCCTCACTGT
CCGAGACGCTGGAAGTTGGTGGCTCGCTGTGCCCGGAGCCGGGAGGTTCATCAAGTGTTT
TGTTAAAGGGCGCCAGGCCGTCCTGGGCATGGTCAGGAAAGCCAAGTACCGGGAGCTCCT
CCTCTCGGAACTCCTGGGCCGGCGGGCACCTGCCACGGTGCGTCTGGGCCTGGCCTATCA
CGTGCACGACCTCATTGGGGCCCAGTTGGTGGACTGTGTCTCCACCACTTCTGGTACCCT
CCTCCGCCTGCCGGAGACGTGAGGATTCTGCTCATCGTTGGACATGTCCCCAGCATGGGG
AGCGAGGGGCCCAGGCGCGCCGTCCCACCCTGGCTGACATAGGGTCACCTTGGGAGGGTT
TGGGAGCCACGATGAGTGTTGGGCTTGTGTCTGTGCAAAGGGTCAGATGTGCCCGCTGCT
GTTTACCTGGGCTCCGACCCAGTGGTGGGGTTTGGGCAGTGCCTCTCTGCCCTTTGCTGA
AAGTGGAACCAGAAACTGCCCAGGCCATGGCTGCTGCCTTCCACGCAGCAAGCTGCTGCC
GCTGCCCTGTCTTGGGATGGGAAGCAGGGGTATCTGGAGAGGCTGCCGAAGGAGGGTTCT
TCTCCCGACATGTTGGGTTGAAACTGCCAAATAAAGTATTTCTGCCTGTGAAAAAAAAAA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CATCTACCTCTTCCCCGGCACCTTAAGATCCCGGGATATGAGCCGGAAGAGGCATCGCCT
GGTCCCAGAGACCCTTGGACTGAAGAGACCGCGAGAAAGACGGGATGTAGAGGCAGATCC
TTTGCGCGGCGAGTCAGGATCTGCGCGCGCGGCAGTCGCGGAGCTAGTGCGGCTGTTCCC
GCGAGTCCTGTTTGAGGATGCGCTACCGCCCATCGTGCTGAGGAACCAGGTGTACAGTCT
CGTGCCGGACCGGACGGTGGCTGACCGGCAGCTGAAGGCACTTCAAGAGCAGGGGGAGAT
CAGAATCATCCAGCTAGGCTTCGACTTGGACGCACAAGGAATTATCTTCACCGAGGACTA
CAGGACCAGAGTCCTCAAGGCTTGCGAGGGCCGCCCCTATGCTGGCACAGTGCAGAAGTT
CCTGGCTTCGGTGCTTCCAGCCTGTGGCGACCTTAGCTTCCAGCAGGACCAAATGACACA
GACTTTTGGCTTCAGGGATCCGGAGATCACGCAGCTGGTGAATGCCGGGGTCCTCACTGT
CCGAGACGCTGGAAGTTGGTGGCTCGCTGTGCCCGGAGCCGGGAGGTTCATCAAGTGTTT
TGTTAAAGGGCGCCAGGCCGTCCTGGGCATGGTCAGGAAAGCCAAGTACCGGGAGCTCCT
CCTCTCGGAACTCCTGGGCCGGCGGGCACCTGCCACGGTGCGTCTGGGCCTGGCCTATCA
CGTGCACGACCTCATTGGGGCCCAGTTGGTGGACTGTGTCTCCACCACTTCTGGTACCCT
CCTCCGCCTGCCGGAGACGTGAGGATTCTGCTCATCGTTGGACATGTCCCCAGCATGGGG
AGCGAGGGGCCCAGGCGCGCCGTCCCACCCTGGCTGACATAGGGTCACCTTGGGAGGGTT
TGGGAGCCACGATGAGTGTTGGGCTTGTGTCTGTGCAAAGGGTCAGATGTGCCCGCTGCT
GTTTACCTGGGCTCCGACCCAGTGGTGGGGTTTGGGCAGTGCCTCTCTGCCCTTTGCTGA
AAGTGGAACCAGAAACTGCCCAGGCCATGGCTGCTGCCTTCCACGCAGCAAGCTGCTGCC
GCTGCCCTGTCTTGGGATGGGAAGCAGGGGTATCTGGAGAGGCTGCCGAAGGAGGGTTCT
TCTCCCGACATGTTGGGTTGAAACTGCCAAATAAAGTATTTCTGCCTGTGAAAAAAAAAA |
|
gi|7671646|emb|CAB89303.1| |
Protein identifier
|
gi|7671646|emb|CAB89303.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
135-274, gnl|bosTau2|chr23 (23564052-23564191) |
|
135-274, gnl|canFam2|chr12 (4430029-4430188) |
|
135-274, gnl|danRer3|chr3 (44159300-44159188) |
|
135-274, gnl|dasNov1|scaffold_94602 (5974-5815) |
|
135-274, gnl|fr1|chrUn (56087645-56087513) |
|
135-274, gnl|hg17|chr6 (32048375-32048534) |
|
135-274, gnl|Hg17|chr6 (32048374-32048513) |
|
135-274, gnl|loxAfr1|scaffold_5694 (71460-71301) |
|
135-274, gnl|mm7|chr17 (32932628-32932472) |
|
135-274, gnl|Mm7|chr17 (32932627-32932488) |
|
135-274, gnl|monDom2|scaffold_42 (17361557-17361406) |
|
135-274, gnl|oryCun1|scaffold_195381 (48847-49007) |
|
135-274, gnl|panTro1|chr5 (32451446-32451605) |
|
135-274, gnl|rheMac2|chr4 (31628323-31628482) |
|
135-274, gnl|rn3|chr20 (4096524-4096683) |
|
135-274, gnl|tetNig1|chr3 (9385053-9384937) |
|
135-274, gnl|xenTro1|scaffold_895 (35496-35348) |
| |
|
366-511, gnl|bosTau2|chr23 (23570389-23570533) |
|
366-511, gnl|Hg17|chr6 (32055166-32055310) |
|
366-511, gnl|Mm7|chr17 (32833032-32832898) |
| |
|
750-1184, gnl|bosTau2|chr23 (23572267-23572706) |
|
750-1184, gnl|Hg17|chr6 (32056753-32057201) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
135-274, gnl|bosTau2|chr23 (23564052-23564191) |
|
135-274, gnl|canFam2|chr12 (4430029-4430188) |
|
135-274, gnl|danRer3|chr3 (44159300-44159188) |
|
135-274, gnl|dasNov1|scaffold_94602 (5974-5815) |
|
135-274, gnl|fr1|chrUn (56087645-56087513) |
|
135-274, gnl|hg17|chr6 (32048375-32048534) |
|
135-274, gnl|Hg17|chr6 (32048374-32048513) |
|
135-274, gnl|loxAfr1|scaffold_5694 (71460-71301) |
|
135-274, gnl|mm7|chr17 (32932628-32932472) |
|
135-274, gnl|Mm7|chr17 (32932627-32932488) |
|
135-274, gnl|monDom2|scaffold_42 (17361557-17361406) |
|
135-274, gnl|oryCun1|scaffold_195381 (48847-49007) |
|
135-274, gnl|panTro1|chr5 (32451446-32451605) |
|
135-274, gnl|rheMac2|chr4 (31628323-31628482) |
|
135-274, gnl|rn3|chr20 (4096524-4096683) |
|
135-274, gnl|tetNig1|chr3 (9385053-9384937) |
|
135-274, gnl|xenTro1|scaffold_895 (35496-35348) |
| |
|
366-511, gnl|bosTau2|chr23 (23570389-23570533) |
|
366-511, gnl|Hg17|chr6 (32055166-32055310) |
|
366-511, gnl|Mm7|chr17 (32833032-32832898) |
| |
|
750-1184, gnl|bosTau2|chr23 (23572267-23572706) |
|
750-1184, gnl|Hg17|chr6 (32056753-32057201) |
|
fbs (0.350693) |
|
eye (0.341006) |
|
lnt (0.284616) |
|
nep (0.183925) |
|
ton (0.1755) |
|
fhi (0.169578) |
|
cki (0.165235) |
|
ebs (0.118301) |
|
cty (0.10408) |
|
fbs (0.350693) |
|
eye (0.341006) |
|
lnt (0.284616) |
|
nep (0.183925) |
|
ton (0.1755) |
|
fhi (0.169578) |
|
cki (0.165235) |
|
ebs (0.118301) |
|
cty (0.10408) |
