Ss1.1-LyN1-MLN01E050057.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATCCAATTGCCAGAAATCAGTCCGAGTGTTTTCATGTATCATTTTCCTAAATGCAAGAGG CTTTTACTGACTCTTAATAAGCATGCTTACCCAAGTTTTGTTGCATGCTTTAAGTAGCAT AGCTATACACACTTTACATTTTTAAAAATACTCCTTACCTAATGTACCAACCTTCCATAA GGATAGCAGGACTGGGAATAAAGTCAGATGGAATGTGACCCTGTAAATCTATAGCAAGCT TTAGAAATAAATCTTTTGGGCTTTCCCTAGCTTATCTCCCAAGTTGGAACAATCATCCTT AATCTAAGGAAGATGGTATAGACAATCATGGCACCTTTATAAAAAGTCTGAATCCAAAGT TAAAACTTAGGCAAAATGCAACTGTTCTGCCCGCAGTTAGCTCTGAATGGGGATGGAAAG AACTATTTATTTTCCATGCTATGTTAAGTAGGATGGCTGCTATTAAAAATAAATAAATAA ATAAAGCCCATGGATTAAAAAAAAAATACTCACCCAAAGACTTAGAACACAGAAAAATTT TGCTAAGTTGTGAGGAAAACCTCATTTGGTATTTTAAGAGTCAGCAGATTGCATCCATAA ATGTAGTGTTGACTTTCAATGCAAAAGAATCAGTGAGATTAAAGTTATGGGAAGATTTCC CTATGAGCCTGCCGTCAGTATTGTTTACATTAAGACACCCTCTGTTGTCATCTTGCTGTT TTCCATGGAGTCACAGGCATAGCATGGCTTCTGTTCCCAAGTACATAGGACCACATGTAT ATACCACCTTGCATTTAATTGTTCTTTCATGATTGTTTTGTGCCCCTTTTATTAAAAACA CATGAGATGTAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATCCAATTGCCAGAAATCAGTCCGAGTGTTTTCATGTATCATTTTCCTAAATGCAAGAGG CTTTTACTGACTCTTAATAAGCATGCTTACCCAAGTTTTGTTGCATGCTTTAAGTAGCAT AGCTATACACACTTTACATTTTTAAAAATACTCCTTACCTAATGTACCAACCTTCCATAA GGATAGCAGGACTGGGAATAAAGTCAGATGGAATGTGACCCTGTAAATCTATAGCAAGCT TTAGAAATAAATCTTTTGGGCTTTCCCTAGCTTATCTCCCAAGTTGGAACAATCATCCTT AATCTAAGGAAGATGGTATAGACAATCATGGCACCTTTATAAAAAGTCTGAATCCAAAGT TAAAACTTAGGCAAAATGCAACTGTTCTGCCCGCAGTTAGCTCTGAATGGGGATGGAAAG AACTATTTATTTTCCATGCTATGTTAAGTAGGATGGCTGCTATTAAAAATAAATAAATAA ATAAAGCCCATGGATTAAAAAAAAAATACTCACCCAAAGACTTAGAACACAGAAAAATTT TGCTAAGTTGTGAGGAAAACCTCATTTGGTATTTTAAGAGTCAGCAGATTGCATCCATAA ATGTAGTGTTGACTTTCAATGCAAAAGAATCAGTGAGATTAAAGTTATGGGAAGATTTCC CTATGAGCCTGCCGTCAGTATTGTTTACATTAAGACACCCTCTGTTGTCATCTTGCTGTT TTCCATGGAGTCACAGGCATAGCATGGCTTCTGTTCCCAAGTACATAGGACCACATGTAT ATACCACCTTGCATTTAATTGTTCTTTCATGATTGTTTTGTGCCCCTTTTATTAAAAACA CATGAGATGTAC |
| Aligned organism(s): 31 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
| 1-142, gnl|bosTau2|chr9 (47861776-47861635) | |
| 1-142, gnl|canFam2|chr1 (38385906-38386068) | |
| 1-142, gnl|canFam2|chr28 (32933169-32933251) | |
| 1-142, gnl|galGal2|chr3 (51256249-51256098) | |
| 1-142, gnl|hg17|chr10 (121562777-121562853) | |
| 1-142, gnl|hg17|chr6 (144187070-144187230) | |
| 1-142, gnl|loxAfr1|scaffold_21997 (13252-13197) | |
| 1-142, gnl|loxAfr1|scaffold_21997 (13093-13254) | |
| 1-142, gnl|mm7|chr10 (12913920-12913997) | |
| 1-142, gnl|mm7|chr10 (12914068-12913918) | |
| 1-142, gnl|monDom2|scaffold_0 (63690591-63690682) | |
| 1-142, gnl|monDom2|scaffold_0 (63690749-63690589) | |
| 1-142, gnl|panTro1|chr5 (147104300-147104460) | |
| 1-142, gnl|panTro1|chr8 (123823495-123823571) | |
| 1-142, gnl|rheMac2|chr4 (119848516-119848356) | |
| 1-142, gnl|rheMac2|chr9 (119439756-119439832) | |
| 1-142, gnl|rn3|chr1 (7987908-7987985) | |
| 1-142, gnl|rn3|chr1 (7988063-7987906) | |
| 275-851, gnl|bosTau2|chr9 (47861635-47861066) | |
| 275-851, gnl|canFam2|chr1 (38386252-38386735) | |
| 275-851, gnl|galGal2|chr3 (51255916-51255427) | |
| 275-851, gnl|hg17|chr6 (144187416-144187903) | |
| 275-851, gnl|Hg17|chr6 (144187415-144187988) | |
| 275-851, gnl|loxAfr1|scaffold_21997 (13435-13916) | |
| 275-851, gnl|mm7|chr10 (12913743-12913244) | |
| 275-851, gnl|Mm7|chr10 (12913744-12913156) | |
| 275-851, gnl|monDom2|scaffold_0 (63690405-63689893) | |
| 275-851, gnl|oryCun1|scaffold_204255 (314668-315144) | |
| 275-851, gnl|panTro1|chr5 (147104646-147105138) | |
| 275-851, gnl|rheMac2|chr4 (119848170-119847673) | |
| 275-851, gnl|rn3|chr1 (7987730-7987236) |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-142, gnl|bosTau2|chr9 (47861776-47861635) | |
| 1-142, gnl|canFam2|chr1 (38385906-38386068) | |
| 1-142, gnl|canFam2|chr28 (32933169-32933251) | |
| 1-142, gnl|galGal2|chr3 (51256249-51256098) | |
| 1-142, gnl|hg17|chr10 (121562777-121562853) | |
| 1-142, gnl|hg17|chr6 (144187070-144187230) | |
| 1-142, gnl|loxAfr1|scaffold_21997 (13252-13197) | |
| 1-142, gnl|loxAfr1|scaffold_21997 (13093-13254) | |
| 1-142, gnl|mm7|chr10 (12913920-12913997) | |
| 1-142, gnl|mm7|chr10 (12914068-12913918) | |
| 1-142, gnl|monDom2|scaffold_0 (63690591-63690682) | |
| 1-142, gnl|monDom2|scaffold_0 (63690749-63690589) | |
| 1-142, gnl|panTro1|chr5 (147104300-147104460) | |
| 1-142, gnl|panTro1|chr8 (123823495-123823571) | |
| 1-142, gnl|rheMac2|chr4 (119848516-119848356) | |
| 1-142, gnl|rheMac2|chr9 (119439756-119439832) | |
| 1-142, gnl|rn3|chr1 (7987908-7987985) | |
| 1-142, gnl|rn3|chr1 (7988063-7987906) | |
| 275-851, gnl|bosTau2|chr9 (47861635-47861066) | |
| 275-851, gnl|canFam2|chr1 (38386252-38386735) | |
| 275-851, gnl|galGal2|chr3 (51255916-51255427) | |
| 275-851, gnl|hg17|chr6 (144187416-144187903) | |
| 275-851, gnl|Hg17|chr6 (144187415-144187988) | |
| 275-851, gnl|loxAfr1|scaffold_21997 (13435-13916) | |
| 275-851, gnl|mm7|chr10 (12913743-12913244) | |
| 275-851, gnl|Mm7|chr10 (12913744-12913156) | |
| 275-851, gnl|monDom2|scaffold_0 (63690405-63689893) | |
| 275-851, gnl|oryCun1|scaffold_204255 (314668-315144) | |
| 275-851, gnl|panTro1|chr5 (147104646-147105138) | |
| 275-851, gnl|rheMac2|chr4 (119848170-119847673) | |
| 275-851, gnl|rn3|chr1 (7987730-7987236) |
| Expressed library(ies): 6 entry(ies) | More info |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
| tra (0.246184) | |
| ski (0.146735) | |
| liv (0.146284) | |
| sug (0.127291) | |
| bla (0.124347) | |
| jca (0.11396) |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tra (0.246184) | |
| ski (0.146735) | |
| liv (0.146284) | |
| sug (0.127291) | |
| bla (0.124347) | |
| jca (0.11396) |