Non-Coding RNA Search

Ss1.1-LyN1-MLN01E060081.5

Sequence:


               
               TGCGTCGGCGTGCCCGGGCTGCTTTCAGGTTAGGGCATGTGACCCAAAGTCCAACATATT
CACCTTATTTTTACCGAAAATTCTTAAAGGTTTTTTACACTCAGCTACTTAGGGAATAGA
TGTTTTTTCAACTTGGAACCTTCTGATTCTTAGAGAAAATTATCTGGTATCTGTAGGTAG
CAAATATTTATTCAAGGTAATTTGATAACCTAAAATCGTCTCCATTTTTATCCTCTGCGG
GATTTGTTTCTAAACTGTGGTTTAATTGGTATTAGCTTGTGATTTATGCTTCCAGCCATT
AGCTGAAAGCCTAATTATGAATGGATAAACTGGATTAATTGTTGATAATACTGATTTTTT
AAAAATGGGGACATTTCCTAATTCCCCCCCCCCCTCGAAATATCACATAATTCCCCCAGC
TGCATGAAGACTACTAACCTTGGTGTGGACTGGGTGATGCTTTTGACAGATCCAGAGAAG
CCAAGAGGGCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCGTCGGCGTGCCCGGGCTGCTTTCAGGTTAGGGCATGTGACCCAAAGTCCAACATATT
CACCTTATTTTTACCGAAAATTCTTAAAGGTTTTTTACACTCAGCTACTTAGGGAATAGA
TGTTTTTTCAACTTGGAACCTTCTGATTCTTAGAGAAAATTATCTGGTATCTGTAGGTAG
CAAATATTTATTCAAGGTAATTTGATAACCTAAAATCGTCTCCATTTTTATCCTCTGCGG
GATTTGTTTCTAAACTGTGGTTTAATTGGTATTAGCTTGTGATTTATGCTTCCAGCCATT
AGCTGAAAGCCTAATTATGAATGGATAAACTGGATTAATTGTTGATAATACTGATTTTTT
AAAAATGGGGACATTTCCTAATTCCCCCCCCCCCTCGAAATATCACATAATTCCCCCAGC
TGCATGAAGACTACTAACCTTGGTGTGGACTGGGTGATGCTTTTGACAGATCCAGAGAAG
CCAAGAGGGCTT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               17-485, gnl|bosTau2|chrX (11391398-11391854)
               

               
               17-485, gnl|Hg17|chrX (149603189-149603634)
               

               
               17-485, gnl|Mm7|chrX (66812743-66813336)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               17-485, gnl|bosTau2|chrX (11391398-11391854)
               

               
               17-485, gnl|Hg17|chrX (149603189-149603634)
               

               
               17-485, gnl|Mm7|chrX (66812743-66813336)

Expressed library(ies): 7 entry(ies)

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Expressed library(ies): 7 entry(ies)

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               cly (0.241284)
               

               
               aor (0.195274)
               

               
               csp (0.161186)
               

               
               spl (0.143184)
               

               
               lyg (0.133103)
               

               
               ute (0.132784)
               

               
               ebs (0.118301)

Expressed library(ies): 7 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cly (0.241284)
               

               
               aor (0.195274)
               

               
               csp (0.161186)
               

               
               spl (0.143184)
               

               
               lyg (0.133103)
               

               
               ute (0.132784)
               

               
               ebs (0.118301)

	17-485, gnl\|bosTau2\|chrX (11391398-11391854)
	17-485, gnl\|Hg17\|chrX (149603189-149603634)
	17-485, gnl\|Mm7\|chrX (66812743-66813336)

	cly (0.241284)
	aor (0.195274)
	csp (0.161186)
	spl (0.143184)
	lyg (0.133103)
	ute (0.132784)
	ebs (0.118301)