Non-Coding RNA Search

Ss1.1-LyN1-MLN01E060103.5

Sequence:


               
               TGAAATAGAACATATAAGTCACTGCATTGTATAACAGTGTTAAAAAGTAATTGAGTATCT
TAAGCATTTTGAATCAATTTCAGGTACTGGCACTGCTACCTTAATACAAAATTTATGAAG
ATGATTTCATATAATATGTTGCTATCAAAACTGTGTAATAAAACCTGGTAACAACATCTC
TCCTTAAAAACCTGGGCAAAACAGTATGGTTATAAGATCATAAAGCAGACTTTGATATTG
CTGTTCCTCCTTTTCTTGTAGTAAAGAGAAAGCATTAAAGTAGTATAATTTTAAGTTGTC
TTAAACCATGCTTTTAACCCACAGAATAGGGCAAAGTGGAGTCTTTTCCTAAGGTCTGGG
TTCATGAGGAAAATTTCTGCTCTCAATTCATTTAGTTCACACAACTCATGTTAATGGGAA
CAAAGTCTCATAATCCATGCCTGAATTCATTTTGAAGCATATTTAAAATGTTTGCCACAT
GTTTTCCTCAGAGAATTTGAGGAAGTTCTCCTCACTACTAGTCCTCCTGACTACTGTAAA
TTTGTGAAAAAAATCCTCTTTGATGTCAAAAATGGATTTCTAATTCTTTGTTCATTACGG
GTAACTTTCCTGTTGATGTAGAAATCTTACTAAGAACATTTCAGGGTGGAGGGTTATCCA
TTTGTACTTGAAGAAAAAAAATATAATCCTTAAACAGCAAGGAGATTAATATGCGTATTA
TTTAGGTCTCCCCTCCCCAACTCTCCCTGTGTCCAGGCATCTGAGGTTCCTCCACATCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAAATAGAACATATAAGTCACTGCATTGTATAACAGTGTTAAAAAGTAATTGAGTATCT
TAAGCATTTTGAATCAATTTCAGGTACTGGCACTGCTACCTTAATACAAAATTTATGAAG
ATGATTTCATATAATATGTTGCTATCAAAACTGTGTAATAAAACCTGGTAACAACATCTC
TCCTTAAAAACCTGGGCAAAACAGTATGGTTATAAGATCATAAAGCAGACTTTGATATTG
CTGTTCCTCCTTTTCTTGTAGTAAAGAGAAAGCATTAAAGTAGTATAATTTTAAGTTGTC
TTAAACCATGCTTTTAACCCACAGAATAGGGCAAAGTGGAGTCTTTTCCTAAGGTCTGGG
TTCATGAGGAAAATTTCTGCTCTCAATTCATTTAGTTCACACAACTCATGTTAATGGGAA
CAAAGTCTCATAATCCATGCCTGAATTCATTTTGAAGCATATTTAAAATGTTTGCCACAT
GTTTTCCTCAGAGAATTTGAGGAAGTTCTCCTCACTACTAGTCCTCCTGACTACTGTAAA
TTTGTGAAAAAAATCCTCTTTGATGTCAAAAATGGATTTCTAATTCTTTGTTCATTACGG
GTAACTTTCCTGTTGATGTAGAAATCTTACTAAGAACATTTCAGGGTGGAGGGTTATCCA
TTTGTACTTGAAGAAAAAAAATATAATCCTTAAACAGCAAGGAGATTAATATGCGTATTA
TTTAGGTCTCCCCTCCCCAACTCTCCCTGTGTCCAGGCATCTGAGGTTCCTCCACATCCA

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

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               1-476, gnl|bosTau2|chr10 (7573826-7574293)
               

               
               1-476, gnl|Hg17|chr15 (65825202-65825683)
               

               
               1-476, gnl|Mm7|chr9 (63247912-63247223)
               


               
               519-733, gnl|bosTau2|chr10 (7574306-7574519)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-476, gnl|bosTau2|chr10 (7573826-7574293)
               

               
               1-476, gnl|Hg17|chr15 (65825202-65825683)
               

               
               1-476, gnl|Mm7|chr9 (63247912-63247223)
               


               
               519-733, gnl|bosTau2|chr10 (7574306-7574519)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               lun (0.150489)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lun (0.150489)

	1-476, gnl\|bosTau2\|chr10 (7573826-7574293)
	1-476, gnl\|Hg17\|chr15 (65825202-65825683)
	1-476, gnl\|Mm7\|chr9 (63247912-63247223)

	519-733, gnl\|bosTau2\|chr10 (7574306-7574519)