Ss1.1-LyN1-MLN01E090087.5
|
TTGATAGAGGCTCAGTGAGGTCACCATGGGAACTGCCTTGTGGGGACAAGGGGCGCCCCT
CCTCCTCTGCGCATGCTCATAAGGTCCTGAGCTGGTGAACCTCCCATTACTGCCCTGACT
CTGCCATGGGCACCGGGCTTCTCTGCTGGGCGACCCTCTGGCTCCTGGAGGCAGCTTTTG
TCTCCACAGGTCACGCAGGAGCTGGAGTGTCCCAGTCCCCCAGGCACAGGGTCACAGGGA
GGAACCAGAGTATAGCTCTCAGGTGTGATCCAGTATCTGGTCACAATGGCCTTTACTGGT
ACCGACAGGCACTGGGGCAGGGCCTGGAGTTTCTGACTTATTTTCAGAGCAAAGAAGAAC
CAGACAAATTAGAGCTGCGTAATGACCGGTTCTCTGCTAAGAGGCCCGAGGGCTCCGTCT
CCCACCTGACGATTCTGCGAGTGGAGCCGCAGGACTCGGCTGTGTATCTCTGTGCCAGCA
------------------------ACTTCGGCCCAGGCACCAGGCTCACGGTTGTAGAGG
ACCTGCAGCAGGTGAGACCACCCAAGGTGGCCGTGTTTGAACCATCGGAAGCGGAGATCT
CCCGGACCCAGAAGGCCACCCTCGTGTGCCTGGCCACAGGCTTCTACCCCGACCACGTGG
AGCTGAGCTGGTGGGTGAACGGGAAGCAGGTCCAGAGCGGGGTCAGCACGGACCTTCAGC
CCTACAGGGAGGACCCCAGCCGCAATGACTCCAGCTACTGTCTGAGCAGCCGGCTGAGGG
TCACCGCCGCCTTCTGGCACAACCCCCGCAACCACTTCCGCTGCCAAGTCCAGTTCTATG
GGCTCACGGAGGACGACGAGTGGGAGTACAACTGGACCAAGCCCATCACCCAGAACATCA
GTGCGGAGGCCTGGGGCAAAGCAGACTGTGGCTTCTCCTCTGCGTCCTATCAGCAAGGGG
TCCTGTCTGCCACCCTCCTCTATGAGATCCTGCTGGGGAAGGCCACCCTGTACGCTGTGC
TGGTCAGCGCCCTGGTGCTGATGGCCACGGTAAAGAAAAAGGATTCCTGAGACCAGCTCT
GAAAGTGCATCCTGAGTCGTTCTTTATCTTCACCCTAGATTCACTGTAACATGTTTCCAA
TTAGTGTTTCTTAAGATTCTCTCTCTTTCTCTGCACCTCTTATCTCCTTCCTACATGGAT
ATGTTGCTCTTCTCCCAGCTTCCCTGAAGGTTGAGCTCCTCCACACTGAACCTGAACTAG
ACTAACTCAATAAAATGTCATGATAAACAGCCTGTTAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTGATAGAGGCTCAGTGAGGTCACCATGGGAACTGCCTTGTGGGGACAAGGGGCGCCCCT
CCTCCTCTGCGCATGCTCATAAGGTCCTGAGCTGGTGAACCTCCCATTACTGCCCTGACT
CTGCCATGGGCACCGGGCTTCTCTGCTGGGCGACCCTCTGGCTCCTGGAGGCAGCTTTTG
TCTCCACAGGTCACGCAGGAGCTGGAGTGTCCCAGTCCCCCAGGCACAGGGTCACAGGGA
GGAACCAGAGTATAGCTCTCAGGTGTGATCCAGTATCTGGTCACAATGGCCTTTACTGGT
ACCGACAGGCACTGGGGCAGGGCCTGGAGTTTCTGACTTATTTTCAGAGCAAAGAAGAAC
CAGACAAATTAGAGCTGCGTAATGACCGGTTCTCTGCTAAGAGGCCCGAGGGCTCCGTCT
CCCACCTGACGATTCTGCGAGTGGAGCCGCAGGACTCGGCTGTGTATCTCTGTGCCAGCA
------------------------ACTTCGGCCCAGGCACCAGGCTCACGGTTGTAGAGG
ACCTGCAGCAGGTGAGACCACCCAAGGTGGCCGTGTTTGAACCATCGGAAGCGGAGATCT
CCCGGACCCAGAAGGCCACCCTCGTGTGCCTGGCCACAGGCTTCTACCCCGACCACGTGG
AGCTGAGCTGGTGGGTGAACGGGAAGCAGGTCCAGAGCGGGGTCAGCACGGACCTTCAGC
CCTACAGGGAGGACCCCAGCCGCAATGACTCCAGCTACTGTCTGAGCAGCCGGCTGAGGG
TCACCGCCGCCTTCTGGCACAACCCCCGCAACCACTTCCGCTGCCAAGTCCAGTTCTATG
GGCTCACGGAGGACGACGAGTGGGAGTACAACTGGACCAAGCCCATCACCCAGAACATCA
GTGCGGAGGCCTGGGGCAAAGCAGACTGTGGCTTCTCCTCTGCGTCCTATCAGCAAGGGG
TCCTGTCTGCCACCCTCCTCTATGAGATCCTGCTGGGGAAGGCCACCCTGTACGCTGTGC
TGGTCAGCGCCCTGGTGCTGATGGCCACGGTAAAGAAAAAGGATTCCTGAGACCAGCTCT
GAAAGTGCATCCTGAGTCGTTCTTTATCTTCACCCTAGATTCACTGTAACATGTTTCCAA
TTAGTGTTTCTTAAGATTCTCTCTCTTTCTCTGCACCTCTTATCTCCTTCCTACATGGAT
ATGTTGCTCTTCTCCCAGCTTCCCTGAAGGTTGAGCTCCTCCACACTGAACCTGAACTAG
ACTAACTCAATAAAATGTCATGATAAACAGCCTGTTAAAAAAAAAAAA
|
|
gi|18693193|dbj|BAB85095.1| |
Protein identifier
|
gi|18693193|dbj|BAB85095.1| |
|
7-171, gnl|bosTau2|chr4 (58263244-58263409) |
|
7-171, gnl|Hg17|chr7 (141724491-141724654) |
|
7-171, gnl|Mm7|chr6 (41037763-41037926) |
| |
|
175-480, gnl|bosTau2|chr4 (58263632-58263940) |
|
175-480, gnl|Hg17|chr7 (141724769-141725074) |
|
175-480, gnl|Mm7|chr6 (41038103-41038367) |
| |
|
512-900, gnl|bosTau2|chr4 (60540772-60540381) |
|
512-900, gnl|Hg17|chr7 (142015565-142015953) |
|
512-900, gnl|Mm7|chr6 (41477798-41478174) |
| |
|
1025-1260, gnl|bosTau2|chr4 (60539347-60539120) |
|
1025-1260, gnl|Hg17|chr7 (142017028-142017258) |
|
1025-1260, gnl|Mm7|chr6 (41479230-41479419) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
7-171, gnl|bosTau2|chr4 (58263244-58263409) |
|
7-171, gnl|Hg17|chr7 (141724491-141724654) |
|
7-171, gnl|Mm7|chr6 (41037763-41037926) |
| |
|
175-480, gnl|bosTau2|chr4 (58263632-58263940) |
|
175-480, gnl|Hg17|chr7 (141724769-141725074) |
|
175-480, gnl|Mm7|chr6 (41038103-41038367) |
| |
|
512-900, gnl|bosTau2|chr4 (60540772-60540381) |
|
512-900, gnl|Hg17|chr7 (142015565-142015953) |
|
512-900, gnl|Mm7|chr6 (41477798-41478174) |
| |
|
1025-1260, gnl|bosTau2|chr4 (60539347-60539120) |
|
1025-1260, gnl|Hg17|chr7 (142017028-142017258) |
|
1025-1260, gnl|Mm7|chr6 (41479230-41479419) |
|
fty (6.85775) |
|
med (4.06882) |
|
cly (1.56834) |
|
cag (1.36075) |
|
lnt (1.13847) |
|
csp (0.967118) |
|
thg (0.887536) |
|
cty (0.62448) |
|
col (0.390016) |
|
duo (0.345602) |
|
cga (0.279096) |
|
ill (0.175593) |
|
sin (0.174948) |
|
ebs (0.118301) |
|
cbl (0.114797) |
|
fty (6.85775) |
|
med (4.06882) |
|
cly (1.56834) |
|
cag (1.36075) |
|
lnt (1.13847) |
|
csp (0.967118) |
|
thg (0.887536) |
|
cty (0.62448) |
|
col (0.390016) |
|
duo (0.345602) |
|
cga (0.279096) |
|
ill (0.175593) |
|
sin (0.174948) |
|
ebs (0.118301) |
|
cbl (0.114797) |
