Ss1.1-LyN1-MLN01E110051.5
|
AGCGCAGGCGCTGTAAGTTCGAGGGGGGCGGCAGCCATGGACGACGAGGAGGAGACATAC
CGGCTCTGGAAGATCCGTAAGACCATCATGCAGCTTTGCCACGACCGTGGCTACCTGGTG
ACCCAGGACGAGCTGGACCAGACGCTGGAGGAGTTCAAGGCCCAGTTTGGGGACAAGCCC
AGTGAAGGGCGGCCGCGTCGCACAGACCTCACGGTGCTGGTGGCCCATAATGACGACCCC
ACCGACCAGATGTTCGTCTTCTTCCCAGAGGAGCCCAAGGTGGGTATCAAGACCATCAAG
GTGTACTGCCAGCGCATGCAGGAGGAGAACATCACCAGGGCGCTGATCGTGGTGCAGCAG
GGCATGACGCCCTCTGCTAAGCAGTCCCTTGTCGACATGGCCCCCAAGTATATCCTGGAA
CAGTTTCTGCAGCAGGAGCTACTCATCAACATCACAGAGCACGAGCTGGTCCCAGAGCAC
GTTGTCATGACCAAGGAGGAGGTGACGGAGCTTCTGGCCCGGTATAAACTACGAGAAAAC
CAGCTGCCCAGGATCCAGGCAGGAGACCCTGTGGCACGTTACTTTGGCATAAAGCGAGGG
CAGGTGGTGAAGATCATCCGGCCCAGCGAGACAGCAGGCAGGTACATCACCTATCGGCTG
GTGCAGTAGCCTCCTGACAACAGATGGACAGACGGGTGCTGGGGGTGGGGACAGGGGAGG
AGTGCAGCCCCACAGCATGTGACAGATATATCCCAGGGGGTCACAGGATGGGCTGTGAGT
ACCCACTTTGGCCTTGAGGCTGCGCTGGGGCACCCGCTCCTCCCAGGACCTTCCCTCTGC
TCCCCTGGGCCTGCTCTGGCTCGTGTTTGCCTATCCTGGGCTGAGGGGCCTCATGGCCTC
TCCTGGACACTGAGCCCCACCCCGGATCCCACCTTTAGGCAGCAGGGAGTGCGACTGAAA
TTGATCTGGACTGTGGTTGCTGTTGGATGCTGGAAATTTTTTTAAAATTAAAGATATTTT
GAATAAAAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AGCGCAGGCGCTGTAAGTTCGAGGGGGGCGGCAGCCATGGACGACGAGGAGGAGACATAC
CGGCTCTGGAAGATCCGTAAGACCATCATGCAGCTTTGCCACGACCGTGGCTACCTGGTG
ACCCAGGACGAGCTGGACCAGACGCTGGAGGAGTTCAAGGCCCAGTTTGGGGACAAGCCC
AGTGAAGGGCGGCCGCGTCGCACAGACCTCACGGTGCTGGTGGCCCATAATGACGACCCC
ACCGACCAGATGTTCGTCTTCTTCCCAGAGGAGCCCAAGGTGGGTATCAAGACCATCAAG
GTGTACTGCCAGCGCATGCAGGAGGAGAACATCACCAGGGCGCTGATCGTGGTGCAGCAG
GGCATGACGCCCTCTGCTAAGCAGTCCCTTGTCGACATGGCCCCCAAGTATATCCTGGAA
CAGTTTCTGCAGCAGGAGCTACTCATCAACATCACAGAGCACGAGCTGGTCCCAGAGCAC
GTTGTCATGACCAAGGAGGAGGTGACGGAGCTTCTGGCCCGGTATAAACTACGAGAAAAC
CAGCTGCCCAGGATCCAGGCAGGAGACCCTGTGGCACGTTACTTTGGCATAAAGCGAGGG
CAGGTGGTGAAGATCATCCGGCCCAGCGAGACAGCAGGCAGGTACATCACCTATCGGCTG
GTGCAGTAGCCTCCTGACAACAGATGGACAGACGGGTGCTGGGGGTGGGGACAGGGGAGG
AGTGCAGCCCCACAGCATGTGACAGATATATCCCAGGGGGTCACAGGATGGGCTGTGAGT
ACCCACTTTGGCCTTGAGGCTGCGCTGGGGCACCCGCTCCTCCCAGGACCTTCCCTCTGC
TCCCCTGGGCCTGCTCTGGCTCGTGTTTGCCTATCCTGGGCTGAGGGGCCTCATGGCCTC
TCCTGGACACTGAGCCCCACCCCGGATCCCACCTTTAGGCAGCAGGGAGTGCGACTGAAA
TTGATCTGGACTGTGGTTGCTGTTGGATGCTGGAAATTTTTTTAAAATTAAAGATATTTT
GAATAAAAAAAAAAAAAAAAAAAA
|
|
89-273, gnl|bosTau2|chr7 (26538979-26538795) |
|
89-273, gnl|canFam2|chr20 (60790583-60790714) |
|
89-273, gnl|danRer3|chrNA (39078104-39078238) |
|
89-273, gnl|dasNov1|scaffold_200036 (1490-1621) |
|
89-273, gnl|echTel1|scaffold_316741 (87564-87698) |
|
89-273, gnl|fr1|chrUn (274518925-274518791) |
|
89-273, gnl|galGal2|chr28 (2800721-2800589) |
|
89-273, gnl|hg17|chr11 (109425518-109425652) |
|
89-273, gnl|Hg17|chr19 (1045082-1044885) |
|
89-273, gnl|mm7|chr10 (79818630-79818499) |
|
89-273, gnl|Mm7|chr10 (79818634-79818443) |
|
89-273, gnl|monDom2|scaffold_75 (7021870-7022001) |
|
89-273, gnl|panTro1|chr9 (111385112-111385246) |
|
89-273, gnl|rheMac2|chr14 (108553123-108553256) |
|
89-273, gnl|rn3|chr7 (11180340-11180471) |
|
89-273, gnl|tetNig1|chr1_random (3146616-3146750) |
|
89-273, gnl|xenTro1|scaffold_342 (626135-626004) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
89-273, gnl|bosTau2|chr7 (26538979-26538795) |
|
89-273, gnl|canFam2|chr20 (60790583-60790714) |
|
89-273, gnl|danRer3|chrNA (39078104-39078238) |
|
89-273, gnl|dasNov1|scaffold_200036 (1490-1621) |
|
89-273, gnl|echTel1|scaffold_316741 (87564-87698) |
|
89-273, gnl|fr1|chrUn (274518925-274518791) |
|
89-273, gnl|galGal2|chr28 (2800721-2800589) |
|
89-273, gnl|hg17|chr11 (109425518-109425652) |
|
89-273, gnl|Hg17|chr19 (1045082-1044885) |
|
89-273, gnl|mm7|chr10 (79818630-79818499) |
|
89-273, gnl|Mm7|chr10 (79818634-79818443) |
|
89-273, gnl|monDom2|scaffold_75 (7021870-7022001) |
|
89-273, gnl|panTro1|chr9 (111385112-111385246) |
|
89-273, gnl|rheMac2|chr14 (108553123-108553256) |
|
89-273, gnl|rn3|chr7 (11180340-11180471) |
|
89-273, gnl|tetNig1|chr1_random (3146616-3146750) |
|
89-273, gnl|xenTro1|scaffold_342 (626135-626004) |
|
elu (0.770713) |
|
med (0.465008) |
|
mas (0.42061) |
|
che (0.408942) |
|
fhi (0.339155) |
|
fce (0.271592) |
|
cov (0.264306) |
|
cly (0.241284) |
|
fcc (0.197785) |
|
eje (0.197668) |
|
col (0.195008) |
|
nlu (0.191681) |
|
nep (0.183925) |
|
fbs (0.175346) |
|
eye (0.170503) |
|
lnt (0.142308) |
|
csk (0.140746) |
|
pla (0.133672) |
|
eep (0.122564) |
|
eru (0.120048) |
|
ecc (0.115035) |
|
nbm (0.0993246) |
|
jej (0.0989218) |
|
elu (0.770713) |
|
med (0.465008) |
|
mas (0.42061) |
|
che (0.408942) |
|
fhi (0.339155) |
|
fce (0.271592) |
|
cov (0.264306) |
|
cly (0.241284) |
|
fcc (0.197785) |
|
eje (0.197668) |
|
col (0.195008) |
|
nlu (0.191681) |
|
nep (0.183925) |
|
fbs (0.175346) |
|
eye (0.170503) |
|
lnt (0.142308) |
|
csk (0.140746) |
|
pla (0.133672) |
|
eep (0.122564) |
|
eru (0.120048) |
|
ecc (0.115035) |
|
nbm (0.0993246) |
|
jej (0.0989218) |
