Non-Coding RNA Search

Ss1.1-LyN1-MLN01F030078.5

Sequence:


               
               AGCCTCTTTTCAGATTAGCTCTCCAGACACACAGGGACACCCGGCTCAACCGGGAAAGGC
ATCTGAGACATTTGCCAACAACAGTTAGCCACGTGTGGTGGTGATGTCCCCGTGACCTTG
ACGTGTGTGGCCCCTTCCTCTGCTCCGTTGTGCTCAGTTATGTGGTGCAGCTCAGAAAGG
ACCAGGTGACGGTGTCAGGGCGGGTGCCTAGCCAGCAAGGAGCACCTGACATCAGAGAGG
ATGGAGCTGCTTTCCTTTCGTAGGAGAGCTTCCCCTGAGGTCATCGTTTGCTGTGATTTT
AGTGGCCTTATTGTGACAGTGCCATCCTGTCTTATTCTTCCTTGTGAAACCAGGATCCCC
TTCACTGAGGGACACCTGGTGGCTTAATGCAGCTCAGATGCAGTGCTAAGCATGCCCCCT
GTAGTCAGAGATGCCTGCTTGCAGAGAATATATTAACTCCCACATACTCCTGGCTCTAAG
CGTTAGGGACATACCCACACCTGGATCCCTTGTCACACCTGTTTAGCTGTTTAAAACATA
ACTGCCTGGCATAGGCGATTCCTCCGAGGCTGTGGTGGTGAAGCATCTGTAGTCTGCTGC
TCCGGGAGAGATCAAGGACCTGCAGCTCCCCTCCCCCACCGGAGCGCACTGCTTCTGTGC
CAGCTCCTCCCCAAGCCGCGCTGTAGAGAATGCATGCCAGTATGCCAAGTTTTGTGTTCC
TCTCCAAATAAATGTGAAGACTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCCTCTTTTCAGATTAGCTCTCCAGACACACAGGGACACCCGGCTCAACCGGGAAAGGC
ATCTGAGACATTTGCCAACAACAGTTAGCCACGTGTGGTGGTGATGTCCCCGTGACCTTG
ACGTGTGTGGCCCCTTCCTCTGCTCCGTTGTGCTCAGTTATGTGGTGCAGCTCAGAAAGG
ACCAGGTGACGGTGTCAGGGCGGGTGCCTAGCCAGCAAGGAGCACCTGACATCAGAGAGG
ATGGAGCTGCTTTCCTTTCGTAGGAGAGCTTCCCCTGAGGTCATCGTTTGCTGTGATTTT
AGTGGCCTTATTGTGACAGTGCCATCCTGTCTTATTCTTCCTTGTGAAACCAGGATCCCC
TTCACTGAGGGACACCTGGTGGCTTAATGCAGCTCAGATGCAGTGCTAAGCATGCCCCCT
GTAGTCAGAGATGCCTGCTTGCAGAGAATATATTAACTCCCACATACTCCTGGCTCTAAG
CGTTAGGGACATACCCACACCTGGATCCCTTGTCACACCTGTTTAGCTGTTTAAAACATA
ACTGCCTGGCATAGGCGATTCCTCCGAGGCTGTGGTGGTGAAGCATCTGTAGTCTGCTGC
TCCGGGAGAGATCAAGGACCTGCAGCTCCCCTCCCCCACCGGAGCGCACTGCTTCTGTGC
CAGCTCCTCCCCAAGCCGCGCTGTAGAGAATGCATGCCAGTATGCCAAGTTTTGTGTTCC
TCTCCAAATAAATGTGAAGACTTT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-419, gnl|bosTau2|chr22 (45671621-45672043)
               

               
               1-419, gnl|Hg17|chr3 (12207108-12207519)
               

               
               1-419, gnl|Mm7|chr6 (115306820-115307232)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-419, gnl|bosTau2|chr22 (45671621-45672043)
               

               
               1-419, gnl|Hg17|chr3 (12207108-12207519)
               

               
               1-419, gnl|Mm7|chr6 (115306820-115307232)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

Help | Less info


               
               fbs (0.175346)
               

               
               hyp (0.142837)
               

               
               ebs (0.118301)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.175346)
               

               
               hyp (0.142837)
               

               
               ebs (0.118301)

	1-419, gnl\|bosTau2\|chr22 (45671621-45672043)
	1-419, gnl\|Hg17\|chr3 (12207108-12207519)
	1-419, gnl\|Mm7\|chr6 (115306820-115307232)