Non-Coding RNA Search

Ss1.1-LyN1-MLN01F040070.5

Sequence:


               
               TCGCCTATCCCTGGATTTGCAGAGTGAGGCTGAGTCAGTCTCTTTTGTATTCGCAGCTGC
ATGTTAAGGTGGGCGTCTGCGGTGCTCCACTCCCTTGTCGAAAATGTACTGCAAGCTTTA
AATATCCTCCTGTTGATGGACATTTAGATTGTTGCCTTTTGAAAAACCTCCTCTTACAAA
ACAGTTCTGCAGTGCACAGTCTTGTTCATGTCTCCTTGTGCACAGAGAACAACTTCTAGA
TGTGCTTAGAAGTGCACAGAGAACAACTTCTAGATGTGCTTAGAAGTGGCTGAGTAATAA
AGCGTACACTTATTTTATTTCTTTTGATTGTCTGACTGTACCTTCTACAATTTTTAGTAC
AGTTTTTATCCACAGTGTTGATAAGTACCCATCCTTGTCTTATTTTTGACTTTCAGGGGA
GGGTTTTCTGATGTTTCACCACTTAGGAGGATGTTTGTGGTCAGTTTTTGGTAGAATTTT
TTGTCCGGTAAAGGAAATTCTCTTATTCCTTGATTGGTAAGAATTTTCTTTTGGAATTAT
GAATGGTGGTTGAATTTTGTCAAATGCTTTTATAGCCAATTTTGTTTTAATCCAGTCTTC
CAAGACATTTCACATTGGGGGCATCCGCATCCCCAGTTCCCTATTGTCTCACATGTAGGG
GGTAGTCTGGGGGCTTCCCATGATTTAAATCTGGCCTTTGTATCTTGGGGAGGAGTCCTG
TAACTTTTGGTTAAGCACAGTCCCCCTGGGCACTTGTGGGATTTGCCATCAGACCCCTCC
TTAAGAAGCCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCGCCTATCCCTGGATTTGCAGAGTGAGGCTGAGTCAGTCTCTTTTGTATTCGCAGCTGC
ATGTTAAGGTGGGCGTCTGCGGTGCTCCACTCCCTTGTCGAAAATGTACTGCAAGCTTTA
AATATCCTCCTGTTGATGGACATTTAGATTGTTGCCTTTTGAAAAACCTCCTCTTACAAA
ACAGTTCTGCAGTGCACAGTCTTGTTCATGTCTCCTTGTGCACAGAGAACAACTTCTAGA
TGTGCTTAGAAGTGCACAGAGAACAACTTCTAGATGTGCTTAGAAGTGGCTGAGTAATAA
AGCGTACACTTATTTTATTTCTTTTGATTGTCTGACTGTACCTTCTACAATTTTTAGTAC
AGTTTTTATCCACAGTGTTGATAAGTACCCATCCTTGTCTTATTTTTGACTTTCAGGGGA
GGGTTTTCTGATGTTTCACCACTTAGGAGGATGTTTGTGGTCAGTTTTTGGTAGAATTTT
TTGTCCGGTAAAGGAAATTCTCTTATTCCTTGATTGGTAAGAATTTTCTTTTGGAATTAT
GAATGGTGGTTGAATTTTGTCAAATGCTTTTATAGCCAATTTTGTTTTAATCCAGTCTTC
CAAGACATTTCACATTGGGGGCATCCGCATCCCCAGTTCCCTATTGTCTCACATGTAGGG
GGTAGTCTGGGGGCTTCCCATGATTTAAATCTGGCCTTTGTATCTTGGGGAGGAGTCCTG
TAACTTTTGGTTAAGCACAGTCCCCCTGGGCACTTGTGGGATTTGCCATCAGACCCCTCC
TTAAGAAGCCCA

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

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               102-254, gnl|bosTau2|chr28 (5171758-5171603)
               

               
               102-254, gnl|Hg17|chr1 (233630295-233630452)
               


               
               259-642, gnl|bosTau2|chr28 (5171632-5171260)
               

               
               259-642, gnl|Hg17|chr1 (233630423-233630801)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               102-254, gnl|bosTau2|chr28 (5171758-5171603)
               

               
               102-254, gnl|Hg17|chr1 (233630295-233630452)
               


               
               259-642, gnl|bosTau2|chr28 (5171632-5171260)
               

               
               259-642, gnl|Hg17|chr1 (233630423-233630801)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               hlv (0.139256)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hlv (0.139256)

	102-254, gnl\|bosTau2\|chr28 (5171758-5171603)
	102-254, gnl\|Hg17\|chr1 (233630295-233630452)

	259-642, gnl\|bosTau2\|chr28 (5171632-5171260)
	259-642, gnl\|Hg17\|chr1 (233630423-233630801)