Ss1.1-LyN1-MLN01F060089.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATTCCGCGGCCGCCGCCAGCCGAGGGGAGCGTCGCGAGCAGATGCCGCGGGGGCAGCTCG CAGCCGCCGCCGACTTGTGAATGGGACCCGGACTGGGGCCGGGGCTGACACCACTGCGCT CGCCCTGCGCCAGGGACCGACGGCCCGCAGCTCGCGCCCAACCTCCAGGGCCCCAGAAAT CACTGTATATTCGACTCAGTGGCCCTGGGACGATCATTCCTGTTGCCATTTGTTGACTGA CCAATCAGATGGGTGGAGTTTTGTGTTATAGAAATTGGCAGCAAGTATCCAATGGGTGAA GAAGAGGCCGACCGGGGAAGCGGGCAGCCCTGACGTGATGTGCTGGGTGAGGAGAGACCT TCCAGCCCGAGAGAGGTCAGCGTGACACGTCCGGGACGCCACCATCTGCCAGGCCACCGC ACGGTCAGTGGAAGGGGTGACAGCCGCATTCTCCTGTGCCTACCACGGAACCAAAAATGA AGGAGAACTACTGTTTACAAGCCGCTCTGGTGTGCCTGGGCATGCTGTGCCACAGCCAGG CCTTCGCCACCGAGCGCAGGAGCCACCTGAGACCCTCGTTCCACGGGCACCACGAGAAGG GCAAGGAGGGCCAGGTGCTGCAGCGCTCCAAGAGAGGCTGGGTCTGGAACCAGTTCTTCG TGATAGAGGAGTACACCGGGCCTGACCCCGTACTCGTGGGCAGGCTTCATTCCGATATTG ACTCTGGTGATGGGAACATTAAATACATTCTCTCAGGTGAAGGAGCTGGAACCATTTTTG TGATTGATGACAATATCAGGGAACATTCACGCCACCAAGACACTGGACCGAGAGGAGAGA GCCCAGTACACACTGATGGCTCAGGCGGTGGACAGGGACACCAACCGGCCCCTGGAACCA CCATCAGAATTCATTGTCAAGGTCCAGGACATTAATGACAACCCTCCCGAGTTCTTACAG GAGACCTATCATGCCAACGTGCCTGAGAGGTCCAACGTGGGAACATCAGTAATCCAGGTG ACAGCTTCAGACGCAGATGACCCCACCTATGGAAACAGTGCCAAGTTAGTGTACAGTATC CTGGAAGGACAACCCTACTTTTCAGTAGAAGCACAGACAGGTATCATCAGAACAGCCCTT CCCAATATGGACAGGGAAGCCAAGGAGGAGTACCACGTGGTGATCCAGGCCAAGGACATG GGTGGACACATGGGTGGACTCTCAGGGACAACCAAAGTGACGATCACACTGACTGATGTC AATGACAACCCACCAAAGTTTCCGCAGAGCGTATACCAGATGTCTGTGTCAGAAGCAGCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATTCCGCGGCCGCCGCCAGCCGAGGGGAGCGTCGCGAGCAGATGCCGCGGGGGCAGCTCG CAGCCGCCGCCGACTTGTGAATGGGACCCGGACTGGGGCCGGGGCTGACACCACTGCGCT CGCCCTGCGCCAGGGACCGACGGCCCGCAGCTCGCGCCCAACCTCCAGGGCCCCAGAAAT CACTGTATATTCGACTCAGTGGCCCTGGGACGATCATTCCTGTTGCCATTTGTTGACTGA CCAATCAGATGGGTGGAGTTTTGTGTTATAGAAATTGGCAGCAAGTATCCAATGGGTGAA GAAGAGGCCGACCGGGGAAGCGGGCAGCCCTGACGTGATGTGCTGGGTGAGGAGAGACCT TCCAGCCCGAGAGAGGTCAGCGTGACACGTCCGGGACGCCACCATCTGCCAGGCCACCGC ACGGTCAGTGGAAGGGGTGACAGCCGCATTCTCCTGTGCCTACCACGGAACCAAAAATGA AGGAGAACTACTGTTTACAAGCCGCTCTGGTGTGCCTGGGCATGCTGTGCCACAGCCAGG CCTTCGCCACCGAGCGCAGGAGCCACCTGAGACCCTCGTTCCACGGGCACCACGAGAAGG GCAAGGAGGGCCAGGTGCTGCAGCGCTCCAAGAGAGGCTGGGTCTGGAACCAGTTCTTCG TGATAGAGGAGTACACCGGGCCTGACCCCGTACTCGTGGGCAGGCTTCATTCCGATATTG ACTCTGGTGATGGGAACATTAAATACATTCTCTCAGGTGAAGGAGCTGGAACCATTTTTG TGATTGATGACAATATCAGGGAACATTCACGCCACCAAGACACTGGACCGAGAGGAGAGA GCCCAGTACACACTGATGGCTCAGGCGGTGGACAGGGACACCAACCGGCCCCTGGAACCA CCATCAGAATTCATTGTCAAGGTCCAGGACATTAATGACAACCCTCCCGAGTTCTTACAG GAGACCTATCATGCCAACGTGCCTGAGAGGTCCAACGTGGGAACATCAGTAATCCAGGTG ACAGCTTCAGACGCAGATGACCCCACCTATGGAAACAGTGCCAAGTTAGTGTACAGTATC CTGGAAGGACAACCCTACTTTTCAGTAGAAGCACAGACAGGTATCATCAGAACAGCCCTT CCCAATATGGACAGGGAAGCCAAGGAGGAGTACCACGTGGTGATCCAGGCCAAGGACATG GGTGGACACATGGGTGGACTCTCAGGGACAACCAAAGTGACGATCACACTGACTGATGTC AATGACAACCCACCAAAGTTTCCGCAGAGCGTATACCAGATGTCTGTGTCAGAAGCAGCT |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 704-1001, gnl|bosTau2|chr10 (14004201-14004497) | |
| 704-1001, gnl|Hg17|chr14 (22594403-22594107) | |
| 704-1001, gnl|Mm7|chr14 (49505973-49505731) | |
| 1118-1289, gnl|bosTau2|chr18 (27400879-27401050) | |
| 1118-1289, gnl|canFam2|chr5 (87093112-87092916) | |
| 1118-1289, gnl|danRer3|chr8 (10658511-10658699) | |
| 1118-1289, gnl|dasNov1|scaffold_413 (120231-120035) | |
| 1118-1289, gnl|echTel1|scaffold_260301 (4812-4616) | |
| 1118-1289, gnl|fr1|chrUn (109895256-109895443) | |
| 1118-1289, gnl|galGal2|chr11 (12600723-12600527) | |
| 1118-1289, gnl|hg17|chr16 (63583166-63583362) | |
| 1118-1289, gnl|Hg17|chr16 (63583342-63583171) | |
| 1118-1289, gnl|loxAfr1|scaffold_4224 (70623-70427) | |
| 1118-1289, gnl|mm7|chr8 (101261803-101261998) | |
| 1118-1289, gnl|Mm7|chr8 (101261979-101261808) | |
| 1118-1289, gnl|monDom2|scaffold_23 (23712495-23712300) | |
| 1118-1289, gnl|oryCun1|scaffold_173771 (4645-4450) | |
| 1118-1289, gnl|panTro1|chr18 (57794324-57794520) | |
| 1118-1289, gnl|rheMac2|chr20 (63237283-63237479) | |
| 1118-1289, gnl|rn3|chr19 (2343194-2342993) | |
| 1118-1289, gnl|tetNig1|chrUn_random (15827550-15827367) | |
| 1118-1289, gnl|xenTro1|scaffold_13 (610089-610293) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 704-1001, gnl|bosTau2|chr10 (14004201-14004497) | |
| 704-1001, gnl|Hg17|chr14 (22594403-22594107) | |
| 704-1001, gnl|Mm7|chr14 (49505973-49505731) | |
| 1118-1289, gnl|bosTau2|chr18 (27400879-27401050) | |
| 1118-1289, gnl|canFam2|chr5 (87093112-87092916) | |
| 1118-1289, gnl|danRer3|chr8 (10658511-10658699) | |
| 1118-1289, gnl|dasNov1|scaffold_413 (120231-120035) | |
| 1118-1289, gnl|echTel1|scaffold_260301 (4812-4616) | |
| 1118-1289, gnl|fr1|chrUn (109895256-109895443) | |
| 1118-1289, gnl|galGal2|chr11 (12600723-12600527) | |
| 1118-1289, gnl|hg17|chr16 (63583166-63583362) | |
| 1118-1289, gnl|Hg17|chr16 (63583342-63583171) | |
| 1118-1289, gnl|loxAfr1|scaffold_4224 (70623-70427) | |
| 1118-1289, gnl|mm7|chr8 (101261803-101261998) | |
| 1118-1289, gnl|Mm7|chr8 (101261979-101261808) | |
| 1118-1289, gnl|monDom2|scaffold_23 (23712495-23712300) | |
| 1118-1289, gnl|oryCun1|scaffold_173771 (4645-4450) | |
| 1118-1289, gnl|panTro1|chr18 (57794324-57794520) | |
| 1118-1289, gnl|rheMac2|chr20 (63237283-63237479) | |
| 1118-1289, gnl|rn3|chr19 (2343194-2342993) | |
| 1118-1289, gnl|tetNig1|chrUn_random (15827550-15827367) | |
| 1118-1289, gnl|xenTro1|scaffold_13 (610089-610293) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fli (0.202881) |