Ss1.1-LyN1-MLN01F080010.5
|
AGGGGCAGCCCAAATTCCAAGCGCAGAAGCCGGGGAAGAGCAAGACGGCTGCGGCGGCCT
CGGAGCGGAACCGGGGGCCAAGGAAGGGCGGTCGCGTAATCGCACCCAAGAAGGCACGCA
TCGTGCAGCAGCAGAAGCTTAAGAAGGAAGTTCCCAGGCTAGAGGTCTGGGGCAGCCCAA
ATTCCAAGCGCAGAAGCCGGGGAAGAGCAAGACGGCTGCGGCGGCCTCGGAGCGGAACCG
GGGGCCAAGGAAGGGCGGTCGCGTAATCGCACCCAAGAAGGCACGCATCGTGCAGCAGCA
GAAGCTTAAGAAGAACCTGGAAGTCGGGATCCGGAAGAAGATTGAACATGACGTGGTGAT
GAAAGCCAGCACCAGTCTGCCCAAGAAGCTGGCGCTGTTGAAGGCCCCCACCAAGAAGAA
GGCAGCAGCCGCCTCCTCCACCAAGACGCCTTCCTAGCTAGCACACAGCTCAACAGAGGC
CATCACTTCAGCCACCCACTCCAGGCTCAGACCTGGGCAGATGACACCATGAGGAAGAGG
GGCCATGCTCCCCAGAGCCTTGGGTAGCACCGTGAACTTACAGTGGGTCTCGCCCATGAG
CAGGTGATCATCAGGTCCAAAGTACGCCTCCCAGGGTGCTGAGAACTCACTGAAGGCCAA
GGCTGCAAGAGGGCCCCCACCAACTTCCTGCGTACCCGCCCCCCATGTCCTGTCTCCACT
GGTTTAACCTGGAGTAATAAACCTGACTTTGTCATTCCTCCTGGGTCACATGCTCCTGTG
AGCTGGCTGCACTGGGGCCGGGGTGCCCCACCAACCAACCAGGTCAGCCCCAGCAGTTTC
TAAGGGAGATGAGCCTCTTGCCCCAGGGAAGGACAAATGGGCTTCTGCACCTCCAGCCTG
GAAGCTGGGAGAGTCTTTTCTTCCCTCTCTCCTTGGGTGACTCATCTGCACACCCTTCAT
GGATATGCCCAGGTCACCCCCTCTGCCGAGGACAAGCCAGGCAGCCTAAGGAGCCACTGT
CCCATCCGCAGGATGGGTATTGACACCACTTAGTAGAGTCAGAACGCTGATTAAACCGGA
ATGTGCTTATAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AGGGGCAGCCCAAATTCCAAGCGCAGAAGCCGGGGAAGAGCAAGACGGCTGCGGCGGCCT
CGGAGCGGAACCGGGGGCCAAGGAAGGGCGGTCGCGTAATCGCACCCAAGAAGGCACGCA
TCGTGCAGCAGCAGAAGCTTAAGAAGGAAGTTCCCAGGCTAGAGGTCTGGGGCAGCCCAA
ATTCCAAGCGCAGAAGCCGGGGAAGAGCAAGACGGCTGCGGCGGCCTCGGAGCGGAACCG
GGGGCCAAGGAAGGGCGGTCGCGTAATCGCACCCAAGAAGGCACGCATCGTGCAGCAGCA
GAAGCTTAAGAAGAACCTGGAAGTCGGGATCCGGAAGAAGATTGAACATGACGTGGTGAT
GAAAGCCAGCACCAGTCTGCCCAAGAAGCTGGCGCTGTTGAAGGCCCCCACCAAGAAGAA
GGCAGCAGCCGCCTCCTCCACCAAGACGCCTTCCTAGCTAGCACACAGCTCAACAGAGGC
CATCACTTCAGCCACCCACTCCAGGCTCAGACCTGGGCAGATGACACCATGAGGAAGAGG
GGCCATGCTCCCCAGAGCCTTGGGTAGCACCGTGAACTTACAGTGGGTCTCGCCCATGAG
CAGGTGATCATCAGGTCCAAAGTACGCCTCCCAGGGTGCTGAGAACTCACTGAAGGCCAA
GGCTGCAAGAGGGCCCCCACCAACTTCCTGCGTACCCGCCCCCCATGTCCTGTCTCCACT
GGTTTAACCTGGAGTAATAAACCTGACTTTGTCATTCCTCCTGGGTCACATGCTCCTGTG
AGCTGGCTGCACTGGGGCCGGGGTGCCCCACCAACCAACCAGGTCAGCCCCAGCAGTTTC
TAAGGGAGATGAGCCTCTTGCCCCAGGGAAGGACAAATGGGCTTCTGCACCTCCAGCCTG
GAAGCTGGGAGAGTCTTTTCTTCCCTCTCTCCTTGGGTGACTCATCTGCACACCCTTCAT
GGATATGCCCAGGTCACCCCCTCTGCCGAGGACAAGCCAGGCAGCCTAAGGAGCCACTGT
CCCATCCGCAGGATGGGTATTGACACCACTTAGTAGAGTCAGAACGCTGATTAAACCGGA
ATGTGCTTATAAAAAAAAAAAAAA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
elu (0.770713) |
|
pla (0.401016) |
|
fcc (0.39557) |
|
nlu (0.383362) |
|
fbs (0.350693) |
|
nje (0.33184) |
|
hyp (0.285673) |
|
cga (0.279096) |
|
eep (0.245128) |
|
cly (0.241284) |
|
ebs (0.236602) |
|
ece (0.229305) |
|
nms (0.213858) |
|
mas (0.210305) |
|
ill (0.175593) |
|
ton (0.1755) |
|
eye (0.170503) |
|
cli (0.152812) |
|
cst (0.140036) |
|
ssp (0.13552) |
|
nmm (0.132802) |
|
med (0.116252) |
|
jca (0.11396) |
|
eje (0.0988338) |
|
elu (0.770713) |
|
pla (0.401016) |
|
fcc (0.39557) |
|
nlu (0.383362) |
|
fbs (0.350693) |
|
nje (0.33184) |
|
hyp (0.285673) |
|
cga (0.279096) |
|
eep (0.245128) |
|
cly (0.241284) |
|
ebs (0.236602) |
|
ece (0.229305) |
|
nms (0.213858) |
|
mas (0.210305) |
|
ill (0.175593) |
|
ton (0.1755) |
|
eye (0.170503) |
|
cli (0.152812) |
|
cst (0.140036) |
|
ssp (0.13552) |
|
nmm (0.132802) |
|
med (0.116252) |
|
jca (0.11396) |
|
eje (0.0988338) |