Non-Coding RNA Search

Ss1.1-LyN1-MLN01G020011.5

Sequence:


               
               GCGGTTAAGTTTTTGAACCCCTGTCGTCAGCCAAGAGCATCATGTGGTCTTTTTCCTGAC
CTCCTGCTAAAGCAGGTGTCTCTTTTCCATGTGACCTCTGTGCAGGAATACATAGTAAGA
TGAACTTTGTTTGGAGACAGGTTTCTGTGGGTCTCTTGTGTTTCTTCACGTCTCGTGGAC
AGAAAAGCATGGTACCGTTCTGTTGGGGATTGTCTCCTCAAGGATGATTGTTTAGTGAAC
AGCCTTGGAAGAAGAAGTGTCTCTCCTCTGGGGCAAAGGGCAGGTTTCTTTACTGTCCAG
CGTCATAAAAATAACAGCTCCATCCAGTGTGCAAAGATTGGGCAGGTTTGTTTGCATCCC
ATTATAAAGAATCGGGGTTTCCTGACCTCAGACTTCTCCTCTCTTCCTGGAGCCCACTAT
GTGTCATGTACTTCCTGGACCCTCTCATGTGACTCCAGGGGAAACAGGGGCCCCAAGGAA
GCTGAGCAAGAAATGATAATACCCTGGCTACTATTATTGCTGAAAATACTGACGTGTACT
CTGTTGCTGACCCAGGGAGCTTTTTTCTTCTGCCAGCATCCTAGAAACCCTGGCATGCTG
ACTTGTCAGCTTGTAAGTAGGGTAAAATCGCAAGACCCTTCACATTCTTGACAGAGTTGC
GTTTGAACATAATGATTTTGAAATAAGGTGCATAGATGAAATTTTGCATCTGGTGAAATT
GGCAGCTGCATATATATGAGTTCTGACCCACAAGAAGGGGTGGGGGGTCGGGGGGGGTAC
TAAAGATATAAGATGTAACTATAAGATTTTCTTGCTAAACAGGCTTTACCTGTTACCCCA
TTTGGGACTTGCCTTAAAACCATTCATCTCACTGCTATGAAATGTTAGACATCAATGGAT
TATGCATTTTGATTTTGAGAGTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGTTAAGTTTTTGAACCCCTGTCGTCAGCCAAGAGCATCATGTGGTCTTTTTCCTGAC
CTCCTGCTAAAGCAGGTGTCTCTTTTCCATGTGACCTCTGTGCAGGAATACATAGTAAGA
TGAACTTTGTTTGGAGACAGGTTTCTGTGGGTCTCTTGTGTTTCTTCACGTCTCGTGGAC
AGAAAAGCATGGTACCGTTCTGTTGGGGATTGTCTCCTCAAGGATGATTGTTTAGTGAAC
AGCCTTGGAAGAAGAAGTGTCTCTCCTCTGGGGCAAAGGGCAGGTTTCTTTACTGTCCAG
CGTCATAAAAATAACAGCTCCATCCAGTGTGCAAAGATTGGGCAGGTTTGTTTGCATCCC
ATTATAAAGAATCGGGGTTTCCTGACCTCAGACTTCTCCTCTCTTCCTGGAGCCCACTAT
GTGTCATGTACTTCCTGGACCCTCTCATGTGACTCCAGGGGAAACAGGGGCCCCAAGGAA
GCTGAGCAAGAAATGATAATACCCTGGCTACTATTATTGCTGAAAATACTGACGTGTACT
CTGTTGCTGACCCAGGGAGCTTTTTTCTTCTGCCAGCATCCTAGAAACCCTGGCATGCTG
ACTTGTCAGCTTGTAAGTAGGGTAAAATCGCAAGACCCTTCACATTCTTGACAGAGTTGC
GTTTGAACATAATGATTTTGAAATAAGGTGCATAGATGAAATTTTGCATCTGGTGAAATT
GGCAGCTGCATATATATGAGTTCTGACCCACAAGAAGGGGTGGGGGGTCGGGGGGGGTAC
TAAAGATATAAGATGTAACTATAAGATTTTCTTGCTAAACAGGCTTTACCTGTTACCCCA
TTTGGGACTTGCCTTAAAACCATTCATCTCACTGCTATGAAATGTTAGACATCAATGGAT
TATGCATTTTGATTTTGAGAGTTT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               6-924, gnl|bosTau2|chr4 (53350055-53349177)
               


               
               120-655, gnl|bosTau2|chr5 (66832306-66832831)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-924, gnl|bosTau2|chr4 (53350055-53349177)
               


               
               120-655, gnl|bosTau2|chr5 (66832306-66832831)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               che (0.136314)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               che (0.136314)

	6-924, gnl\|bosTau2\|chr4 (53350055-53349177)

	120-655, gnl\|bosTau2\|chr5 (66832306-66832831)