Ss1.1-LyN1-MLN01G030008.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTGCCGCGCTGCCTGAGACGCGGCGGGCTGCTTGCGTGCCGCGGAGGGGGCTCAGGTGCT CAGCTCGGCCATCCCCAGGGCAGGGCAGTGCCCGGCCCGGCCCAGTCACATCCATCTGGA GGCTCTCCCCGGCCGGCACGACTCGGAGGCTGCCCAGCTCTTTCTTGTCAATTCAGGAGG GGGAATGCCAGCCCCTAGCATGGACTGTGATGCTTCCACTCTGGTTGCCTGCGTGGTGGA TGTGGAGGTCTTTACCAACCAGGAGGTTAAGGAAAAATTTGAGGGCCTATTCCGGACTTA TGACGACTGTGTGACGTTCCAGCTGTTTAAGAGCTTCAGACGTGTCCGAATAAACTTCAG CAATCCCAAATCTGCAGCCCGAGCCAGGATAGAGCTGCATGAAACCCAGTTCAGGGGGAA AAAATTAAAACTCTACTTTGCACAGGTTCAGACTCCAGAGACAGACGGAGACAAACTGCA TTTGGCCCCACCACAGCCTGCCAAACAGTTCCTCATCTCACCCCCCGCCTCTCCTCCCGT CGGCTGGCAGCCCATCAGCGATGCCACGCCGGTCCTTAACTACGACCTCCTCTATGCCGT GGCCAAACTAGGACCAGGAGAGAAGTACGAGCTCCACGCAGGGACGGAGTCCACCCCGAG TGTCGTCGTGCACGTGTGTGACAGTGACATCGAGGAGGAAGAGGATCCAAAGACGTCCCC CAAGCCAAAAATCATCCAGACCCGGCGTCCCGGCCCGCCGCCCTCCGTGTCCAACTGAGC CCCTGGCTCCACCTCGACGATAATATCCGTCTCCTCTTTATCATGCTTCCCCCCTGCCCC CCAACGTTGTTTGTTTGTCAGAAAAAAAAAATAATTGCCTTTAAATCCCTGGGTGTTTGG TTGTTTGAGATTTCCTTCCTTGTAATCAAGCCTCTCGGACAAAAGGGCTAGGAAAAGGTG ACATGTTTCCTGACCATATCATACCCATCCAGTATC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTGCCGCGCTGCCTGAGACGCGGCGGGCTGCTTGCGTGCCGCGGAGGGGGCTCAGGTGCT CAGCTCGGCCATCCCCAGGGCAGGGCAGTGCCCGGCCCGGCCCAGTCACATCCATCTGGA GGCTCTCCCCGGCCGGCACGACTCGGAGGCTGCCCAGCTCTTTCTTGTCAATTCAGGAGG GGGAATGCCAGCCCCTAGCATGGACTGTGATGCTTCCACTCTGGTTGCCTGCGTGGTGGA TGTGGAGGTCTTTACCAACCAGGAGGTTAAGGAAAAATTTGAGGGCCTATTCCGGACTTA TGACGACTGTGTGACGTTCCAGCTGTTTAAGAGCTTCAGACGTGTCCGAATAAACTTCAG CAATCCCAAATCTGCAGCCCGAGCCAGGATAGAGCTGCATGAAACCCAGTTCAGGGGGAA AAAATTAAAACTCTACTTTGCACAGGTTCAGACTCCAGAGACAGACGGAGACAAACTGCA TTTGGCCCCACCACAGCCTGCCAAACAGTTCCTCATCTCACCCCCCGCCTCTCCTCCCGT CGGCTGGCAGCCCATCAGCGATGCCACGCCGGTCCTTAACTACGACCTCCTCTATGCCGT GGCCAAACTAGGACCAGGAGAGAAGTACGAGCTCCACGCAGGGACGGAGTCCACCCCGAG TGTCGTCGTGCACGTGTGTGACAGTGACATCGAGGAGGAAGAGGATCCAAAGACGTCCCC CAAGCCAAAAATCATCCAGACCCGGCGTCCCGGCCCGCCGCCCTCCGTGTCCAACTGAGC CCCTGGCTCCACCTCGACGATAATATCCGTCTCCTCTTTATCATGCTTCCCCCCTGCCCC CCAACGTTGTTTGTTTGTCAGAAAAAAAAAATAATTGCCTTTAAATCCCTGGGTGTTTGG TTGTTTGAGATTTCCTTCCTTGTAATCAAGCCTCTCGGACAAAAGGGCTAGGAAAAGGTG ACATGTTTCCTGACCATATCATACCCATCCAGTATC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 267-447, gnl|bosTau2|chr14 (27648569-27648389) | |
| 267-447, gnl|canFam2|chr31 (32034287-32034491) | |
| 267-447, gnl|danRer3|chr9 (32840180-32839994) | |
| 267-447, gnl|dasNov1|scaffold_103096 (1959-1755) | |
| 267-447, gnl|echTel1|scaffold_324599 (19822-20024) | |
| 267-447, gnl|fr1|chrUn (55293041-55293245) | |
| 267-447, gnl|galGal2|chr1 (99641399-99641585) | |
| 267-447, gnl|hg17|chr21 (34817682-34817886) | |
| 267-447, gnl|Hg17|chr21 (34817883-34817703) | |
| 267-447, gnl|loxAfr1|scaffold_5407 (6765-6561) | |
| 267-447, gnl|mm7|chr16 (92449859-92450062) | |
| 267-447, gnl|Mm7|chr16 (92450059-92449879) | |
| 267-447, gnl|monDom2|scaffold_29 (13014324-13014135) | |
| 267-447, gnl|oryCun1|scaffold_177485 (51811-51610) | |
| 267-447, gnl|panTro1|chr22 (34810620-34810824) | |
| 267-447, gnl|rheMac2|chr3 (12044349-12044145) | |
| 267-447, gnl|rn3|chr11 (32448678-32448879) | |
| 267-447, gnl|tetNig1|chr10 (6880775-6880962) | |
| 267-447, gnl|xenTro1|scaffold_1078 (87560-87363) | |
| 615-995, gnl|bosTau2|chr23 (18381066-18381446) | |
| 615-995, gnl|Hg17|chr6 (46299000-46298643) | |
| 615-995, gnl|Mm7|chr17 (42159531-42159889) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 267-447, gnl|bosTau2|chr14 (27648569-27648389) | |
| 267-447, gnl|canFam2|chr31 (32034287-32034491) | |
| 267-447, gnl|danRer3|chr9 (32840180-32839994) | |
| 267-447, gnl|dasNov1|scaffold_103096 (1959-1755) | |
| 267-447, gnl|echTel1|scaffold_324599 (19822-20024) | |
| 267-447, gnl|fr1|chrUn (55293041-55293245) | |
| 267-447, gnl|galGal2|chr1 (99641399-99641585) | |
| 267-447, gnl|hg17|chr21 (34817682-34817886) | |
| 267-447, gnl|Hg17|chr21 (34817883-34817703) | |
| 267-447, gnl|loxAfr1|scaffold_5407 (6765-6561) | |
| 267-447, gnl|mm7|chr16 (92449859-92450062) | |
| 267-447, gnl|Mm7|chr16 (92450059-92449879) | |
| 267-447, gnl|monDom2|scaffold_29 (13014324-13014135) | |
| 267-447, gnl|oryCun1|scaffold_177485 (51811-51610) | |
| 267-447, gnl|panTro1|chr22 (34810620-34810824) | |
| 267-447, gnl|rheMac2|chr3 (12044349-12044145) | |
| 267-447, gnl|rn3|chr11 (32448678-32448879) | |
| 267-447, gnl|tetNig1|chr10 (6880775-6880962) | |
| 267-447, gnl|xenTro1|scaffold_1078 (87560-87363) | |
| 615-995, gnl|bosTau2|chr23 (18381066-18381446) | |
| 615-995, gnl|Hg17|chr6 (46299000-46298643) | |
| 615-995, gnl|Mm7|chr17 (42159531-42159889) |
| Expressed library(ies): 7 entry(ies) | More info |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
| fce (0.271592) | |
| mas (0.210305) | |
| hea (0.204499) | |
| hlv (0.139256) | |
| ssp (0.13552) | |
| ecc (0.115035) | |
| jca (0.11396) |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fce (0.271592) | |
| mas (0.210305) | |
| hea (0.204499) | |
| hlv (0.139256) | |
| ssp (0.13552) | |
| ecc (0.115035) | |
| jca (0.11396) |