Ss1.1-LyN1-MLN01G040079.5
|
AGAGGATCCTGAGACAGCCCGTGGATGTCCCACTGCCTCTGCCCACAGCTACCATGAAGG
TCTCCACCGCTGCCCTTGCTGTCATCCTCGCCATGGCCGCCCTCTGCGCTCCAGCATCAG
CCTCCCCATATGCCTCGGACACCACACCCTGCTGTTTTTCCTACCTCTCCCGCCCGCTGC
CCCGCGCCCACCTCCAGGAATATTTCTACACCAGCAGCAAGTGCTCCATGGCAGCAGTCG
TCTTTATCACCAGAAAGAACCGCCAGGTGTGTGCCAACCCAGAGAAGAAATGGGTGCGGG
AGTACATCAACTCCTTGGAGTTGAGCTAGGATGGAGGAAGCCTTGAGCCTGAACTCGTGC
AAACTTTCCTACTGCTTCTTGCTCTTGTCCCAGCCAGCTTGGGAGGCTCTCCCCTGGCCC
CATGCCCTCCCCCCACCTCCTCCTGGGAGGGCACAGACTCCACCACTTACAGCAGCTGCT
GTAAAACCTCCCAGGGCTCCTGGGGGTCTCCTGCCTTGTGCCCAGAAGATCTCTAGGCTC
CGAACTTTGGACCCTTGGCACAGCCACGACTCTGCAGTCAGCACCTCTGGAGGTGAAGAG
GAGAGGGAGAAGGGGCTCCTACACCCTCCGTGGCCAGAGCACCCACCCTGGCCTCTCACT
GGGAAAGGATGACTGGCAAATGTGAGAAATCAGTTTTCCATTAAAATCCTCAATGCAATT
GCAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AGAGGATCCTGAGACAGCCCGTGGATGTCCCACTGCCTCTGCCCACAGCTACCATGAAGG
TCTCCACCGCTGCCCTTGCTGTCATCCTCGCCATGGCCGCCCTCTGCGCTCCAGCATCAG
CCTCCCCATATGCCTCGGACACCACACCCTGCTGTTTTTCCTACCTCTCCCGCCCGCTGC
CCCGCGCCCACCTCCAGGAATATTTCTACACCAGCAGCAAGTGCTCCATGGCAGCAGTCG
TCTTTATCACCAGAAAGAACCGCCAGGTGTGTGCCAACCCAGAGAAGAAATGGGTGCGGG
AGTACATCAACTCCTTGGAGTTGAGCTAGGATGGAGGAAGCCTTGAGCCTGAACTCGTGC
AAACTTTCCTACTGCTTCTTGCTCTTGTCCCAGCCAGCTTGGGAGGCTCTCCCCTGGCCC
CATGCCCTCCCCCCACCTCCTCCTGGGAGGGCACAGACTCCACCACTTACAGCAGCTGCT
GTAAAACCTCCCAGGGCTCCTGGGGGTCTCCTGCCTTGTGCCCAGAAGATCTCTAGGCTC
CGAACTTTGGACCCTTGGCACAGCCACGACTCTGCAGTCAGCACCTCTGGAGGTGAAGAG
GAGAGGGAGAAGGGGCTCCTACACCCTCCGTGGCCAGAGCACCCACCCTGGCCTCTCACT
GGGAAAGGATGACTGGCAAATGTGAGAAATCAGTTTTCCATTAAAATCCTCAATGCAATT
GCAAAAAAAAAA
|
|
gi|2493669|sp|Q29288|CCL5_PIG |
Protein identifier
|
gi|2493669|sp|Q29288|CCL5_PIG |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
125-241, gnl|bosTau2|chr19 (7887634-7887750) |
|
125-241, gnl|canFam2|chr9 (41139506-41139228) |
|
125-241, gnl|dasNov1|scaffold_14653 (19666-19408) |
|
125-241, gnl|echTel1|scaffold_323027 (13296-13081) |
|
125-241, gnl|hg17|chr17 (31229619-31229870) |
|
125-241, gnl|Hg17|chr17 (31229761-31229645) |
|
125-241, gnl|loxAfr1|scaffold_3121 (4199-3971) |
|
125-241, gnl|mm7|chr11 (83599015-83599276) |
|
125-241, gnl|Mm7|chr11 (83599177-83599061) |
|
125-241, gnl|oryCun1|scaffold_179967 (76009-76284) |
|
125-241, gnl|panTro1|chr19 (34755666-34755917) |
|
125-241, gnl|rheMac2|chr16 (31151588-31151839) |
|
125-241, gnl|rn3|chr10 (71623321-71623582) |
| |
|
242-725, gnl|bosTau2|chr19 (7892263-7892752) |
|
242-725, gnl|Hg17|chr17 (31223581-31222608) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
125-241, gnl|bosTau2|chr19 (7887634-7887750) |
|
125-241, gnl|canFam2|chr9 (41139506-41139228) |
|
125-241, gnl|dasNov1|scaffold_14653 (19666-19408) |
|
125-241, gnl|echTel1|scaffold_323027 (13296-13081) |
|
125-241, gnl|hg17|chr17 (31229619-31229870) |
|
125-241, gnl|Hg17|chr17 (31229761-31229645) |
|
125-241, gnl|loxAfr1|scaffold_3121 (4199-3971) |
|
125-241, gnl|mm7|chr11 (83599015-83599276) |
|
125-241, gnl|Mm7|chr11 (83599177-83599061) |
|
125-241, gnl|oryCun1|scaffold_179967 (76009-76284) |
|
125-241, gnl|panTro1|chr19 (34755666-34755917) |
|
125-241, gnl|rheMac2|chr16 (31151588-31151839) |
|
125-241, gnl|rn3|chr10 (71623321-71623582) |
| |
|
242-725, gnl|bosTau2|chr19 (7892263-7892752) |
|
242-725, gnl|Hg17|chr17 (31223581-31222608) |
|
ill (1.22915) |
|
jej (0.395687) |
|
duo (0.345602) |
|
nlu (0.191681) |
|
csp (0.161186) |
|
lnt (0.142308) |
|
pla (0.133672) |
|
ute (0.132784) |
|
ill (1.22915) |
|
jej (0.395687) |
|
duo (0.345602) |
|
nlu (0.191681) |
|
csp (0.161186) |
|
lnt (0.142308) |
|
pla (0.133672) |
|
ute (0.132784) |
