Ss1.1-LyN1-MLN01G060032.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATTCTCCCTAGCAACTGAGGGACCGCGGCGGCGCCGGCCTCCCGGGAGCCACGCTCCAGA ATGGCAGAAGACGATCCATATTTGGGAGGGCACGATCAAATGTTTCATTTGGATCCTTTG AATCATACAATATTTAATCCAGAATTATTTCAACCGGAGATGCCACTGCCAACAGCAGAT GGCCCATACCTTCAAATATTAGAGCAACCTAAACAGAGAGGATTTCGTTTCCGTTATGTG TGTGAAGGCCCCTCCCATGGTGGACTCCCTGGCGCATCTAGTGAAAAGAACAAGAAGTCC TACCCTCAGGTCAAAATCTGCAACTATGTTGGACCTGCAAAGGTTATTGTTCAGTTGGTC ACAAATGGAAAAAACATCCACCTGCATGCACACAGCCTGGTGCGAAAACACTGTGAGGAT GGGATCTGCACTGTCACTGCTGGACCCAAGGACATGGTGGTCGGGTAAGTGAGGGTACGT GTTGTTGCAGAAGGGAGGAGCAGAAAGAACATGGCACCTGGAGACTCGGACTGAACAGGC CCTGTTCATGAGAGGTCTTTCCAAGGTCCTCAGAGAGCCTCAGAATATGAAAATTTTTGC TCTCACTTGGACTCCAAAGAAGAAGGTGCCTACTTGTCCGGCTTTCTCCGAGACAGCCCA CTTTATGCCTGTGATCCTGGCCTCATTATTTGTAGCACTCTCTTTCACTCAGAAGTGGCC CAGTTTGGATGATAAATTATATGGTCACTTGACCTTTGAGGCATTTGTGGCAATTTCAGC ATTATTTTCCTTCTGGAAATAAAGATAAGAACAAATCAGAAGAAAACTAGCCATAGCAGA AATCAGCACTTTATAGATGGTTTCATACCCTTGTTGATTCCTTTAATGAACTCTTGACTA TAGATATATAATGTGAATATATATGTGAGCATGAGGTGGACAGATAAATATTGTGTTAGT TCTCTATTGCTTAGAAGGTGTGCATAGGAGCTCCCTGGTGGAACAGCACGTTAAGGATCT ------------------------------------------------------------ ------------GAAAAACAAAAGAAAACAAAAAAAGTTTGTATAGAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATTCTCCCTAGCAACTGAGGGACCGCGGCGGCGCCGGCCTCCCGGGAGCCACGCTCCAGA ATGGCAGAAGACGATCCATATTTGGGAGGGCACGATCAAATGTTTCATTTGGATCCTTTG AATCATACAATATTTAATCCAGAATTATTTCAACCGGAGATGCCACTGCCAACAGCAGAT GGCCCATACCTTCAAATATTAGAGCAACCTAAACAGAGAGGATTTCGTTTCCGTTATGTG TGTGAAGGCCCCTCCCATGGTGGACTCCCTGGCGCATCTAGTGAAAAGAACAAGAAGTCC TACCCTCAGGTCAAAATCTGCAACTATGTTGGACCTGCAAAGGTTATTGTTCAGTTGGTC ACAAATGGAAAAAACATCCACCTGCATGCACACAGCCTGGTGCGAAAACACTGTGAGGAT GGGATCTGCACTGTCACTGCTGGACCCAAGGACATGGTGGTCGGGTAAGTGAGGGTACGT GTTGTTGCAGAAGGGAGGAGCAGAAAGAACATGGCACCTGGAGACTCGGACTGAACAGGC CCTGTTCATGAGAGGTCTTTCCAAGGTCCTCAGAGAGCCTCAGAATATGAAAATTTTTGC TCTCACTTGGACTCCAAAGAAGAAGGTGCCTACTTGTCCGGCTTTCTCCGAGACAGCCCA CTTTATGCCTGTGATCCTGGCCTCATTATTTGTAGCACTCTCTTTCACTCAGAAGTGGCC CAGTTTGGATGATAAATTATATGGTCACTTGACCTTTGAGGCATTTGTGGCAATTTCAGC ATTATTTTCCTTCTGGAAATAAAGATAAGAACAAATCAGAAGAAAACTAGCCATAGCAGA AATCAGCACTTTATAGATGGTTTCATACCCTTGTTGATTCCTTTAATGAACTCTTGACTA TAGATATATAATGTGAATATATATGTGAGCATGAGGTGGACAGATAAATATTGTGTTAGT TCTCTATTGCTTAGAAGGTGTGCATAGGAGCTCCCTGGTGGAACAGCACGTTAAGGATCT ------------------------------------------------------------ ------------GAAAAACAAAAGAAAACAAAAAAAGTTTGTATAGAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 207-315, gnl|bosTau2|chr6 (7285613-7285505) | |
| 207-315, gnl|canFam2|chr32 (26884702-26884820) | |
| 207-315, gnl|danRer3|chr13 (26324678-26324796) | |
| 207-315, gnl|dasNov1|scaffold_53980 (3774-3892) | |
| 207-315, gnl|echTel1|scaffold_316526 (144290-144395) | |
| 207-315, gnl|fr1|chrUn (139258446-139258553) | |
| 207-315, gnl|hg17|chr4 (103816181-103816299) | |
| 207-315, gnl|Hg17|chr4 (103816188-103816296) | |
| 207-315, gnl|loxAfr1|scaffold_188 (180740-180622) | |
| 207-315, gnl|mm7|chr3 (135449960-135449843) | |
| 207-315, gnl|Mm7|chr3 (135449952-135449844) | |
| 207-315, gnl|monDom2|scaffold_37 (9174672-9174554) | |
| 207-315, gnl|oryCun1|scaffold_132098 (3988-4106) | |
| 207-315, gnl|panTro1|chr3_random (4396994-4397112) | |
| 207-315, gnl|rheMac2|chr5 (95510191-95510309) | |
| 207-315, gnl|rn3|chr2 (233161932-233161815) | |
| 207-315, gnl|tetNig1|chr17 (7690702-7690805) | |
| 316-596, gnl|bosTau2|chr6 (7254623-7254343) | |
| 316-596, gnl|Hg17|chr4 (103845335-103845618) | |
| 316-596, gnl|Mm7|chr3 (135421087-135420840) | |
| 821-927, gnl|bosTau2|chr6 (7254341-7254237) | |
| 821-927, gnl|Hg17|chr4 (103845836-103845937) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 207-315, gnl|bosTau2|chr6 (7285613-7285505) | |
| 207-315, gnl|canFam2|chr32 (26884702-26884820) | |
| 207-315, gnl|danRer3|chr13 (26324678-26324796) | |
| 207-315, gnl|dasNov1|scaffold_53980 (3774-3892) | |
| 207-315, gnl|echTel1|scaffold_316526 (144290-144395) | |
| 207-315, gnl|fr1|chrUn (139258446-139258553) | |
| 207-315, gnl|hg17|chr4 (103816181-103816299) | |
| 207-315, gnl|Hg17|chr4 (103816188-103816296) | |
| 207-315, gnl|loxAfr1|scaffold_188 (180740-180622) | |
| 207-315, gnl|mm7|chr3 (135449960-135449843) | |
| 207-315, gnl|Mm7|chr3 (135449952-135449844) | |
| 207-315, gnl|monDom2|scaffold_37 (9174672-9174554) | |
| 207-315, gnl|oryCun1|scaffold_132098 (3988-4106) | |
| 207-315, gnl|panTro1|chr3_random (4396994-4397112) | |
| 207-315, gnl|rheMac2|chr5 (95510191-95510309) | |
| 207-315, gnl|rn3|chr2 (233161932-233161815) | |
| 207-315, gnl|tetNig1|chr17 (7690702-7690805) | |
| 316-596, gnl|bosTau2|chr6 (7254623-7254343) | |
| 316-596, gnl|Hg17|chr4 (103845335-103845618) | |
| 316-596, gnl|Mm7|chr3 (135421087-135420840) | |
| 821-927, gnl|bosTau2|chr6 (7254341-7254237) | |
| 821-927, gnl|Hg17|chr4 (103845836-103845937) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.122564) |