Ss1.1-LyN1-MLN01G080103.5.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCGGCCGCTGAGGTGCTGGCGGACCGGCCGGCTGGGGACCCGGGCTGCAGGGACGAGAGG CGCGTTCGGCGTCCGCACTCCCGCGTCCTCGCCTCAGTTGTCTAAACTTCGGGCTCCAGT CCNCCCGCCCTCCGCTCCCGGAGTCAACAACTTCTTTTTTTCCCTCCACCCCTGCCCCCG CCCTCCGTCAGCCCCGGGAGCTCGCCGCGCGGCGGGGACCAGGACTCGCCGGCCCTTAGA TGTGGCCGTGAGTCGGCGGGCGGCGAGGAGAAGCTCGGCGGCGCCCGGGAGCGGGAGGGC GGTGCGGCCGGAGGAACGGGGCGGAGGGGCGCGAGCGCTCGGCGCCTCTCCCCCGCCTCC TCCTCCTGCCGCTGCCCGTTCCGTGCAAGCAGCAGCCGGAGCTGCCAAGCGCCAGGGCCG CGGAGATGTCGTCGTCGTCGCCGCCGCCGGCGGCGGCTGCCAGCGCCGCCATCTCGGCCT CGGAGAAAGTGGACGGCTTCACCCGGAAATCGGTGCGCAAGGCGCAGAGGCAGAAGCGCT CTCAGGGCTCGTCGCAGTTCCGCAGCCAGGGCAGCCAGCCGGAGCTGCACCCCTTGCCCC AGCTCAAAGATGCCACTTCAAATGAACAACAAGAACTTTTCTGTCAGAAGTTGCAGCAGT GTTGCATACTGTTTGATTTCATGGACTCTGTTTCAGACTTGAAGAGCAAAGAAATTAAAA GAGCAACATTGAATGAACTGGTTGAGTATGTTTCAACTAATCGTGGTGTAATTGTTGAAT CAGCGTATTCTGATATAGTAAAAATGATCAGTGCTAACATCTTCCGAACTCTTCCTCCAA GTGATAATCCAGATTTTGATCCAGAAGAGGATGAGCCCACACTCGAGGCCTCTTGGCCTC ACATACAATTGGTGTATGAATTCTTCTTAAGATTTTTGGAGAGCCCTGATTTCCAGCCTA GCATTGCCAAGCGATACATTGATCAGAAATTTGTACAACAGCTCCTGGAGCTTTTTGATA GTGAAGATCCCAGAGAACGTGACTTCCTGAAGACGGTTCTGCATCGAATTTATGGGAAAT TTCTTGGATTAAGAGCATTCATCAGAAAACAAATTAACAACATTTTTCTCAGGTTTATAT ATGAAACAGAGCATTTCAATGGTGTTGCTGAGCTCCTTGAAATATTAGGAAGTATTATCA ATGGCTTTGCATTGCCACTGAAAGCAGAACATAAACAATTTCTAATGAAGGTTCTTATTC CTATGCATACTGCGAAAGGATTAGCTTTGTTTCATGCTCAGCTAGCCTACTGTGTTGTAC AGTTCCTGGAGAAAGATACAACACTAACAGAACCAGTGATCAGAGGATTGCTGAAATTTT GGCCAAAAACATGCAGTCAGAAAGAGGTGATGTTTTTAGGAGAAATTGAAGAAATCTTAG ATGTCATTGAACCAACACAATTCAAAAAAATTGAAGAGCCCCTTTTTAAGCAGATATCCA AGTGTGTATCCAGTTCTCATTTTCAGGTTGCAGAAAGGGCATTGTACTTCTGGAATAATG AATATATTCTTAGTTTGATTGAGGAGAACATTGATAAAATTCTGCCAATTATGTTTGGCA GTTTGTATAAAATCTCCAAAGAACACTGGAATCCGACCATTGTGGCGCTGGTGTACAACG TGCTGAAAACCCTCATGGAGATGAACGGCAAGCTTTTCGATGACCTTACGAGCTCATACA AGGCTGAAAGACAAAGGGAGAAAAAGAAGGAATTGGAACGTGAAGAATTATGGAAAAAAT TAGAGGAGCTAAAGCTAAAGAAAGCTCTAGAAAAGCAGAACAGTGCTTACAACATGCACA GTATCCTCAGCAATACAAGCGATGAATAAAAAAAGCCTGTCACCTCTGCTGGATAGGCGG TTTTGTACACTTTTTTGAAATGTGTAAAAATTATGAAACAAACCTCATCAGTATAATATA ATTAAAAAGCCAATTTTTTTTTTTTGGCAACTGTAAATGAAAAAAAAAAAATATATGGAC TAAACATAGCCCTGGGCTATATCATAGCCACAGTATATTGTAACCTTTGTCTAATCATTG ATTTGTGTCACTTCTGCAGTTTCACAGAAATGAATGAACTTTATCATCTACGATATGAGT GAACTAATTATGGGCGTGGTGAGAATCATGACTTGAATTCTGTTTGGGGTTGTGTTGCAC ATAGAGTAGTCTGCTCTGTATATTTTTCCCTTTTCTAATGTGCTTTTCACGTCGCTGCAG ACCTTAGTTACATCCTAGGAAAAAGATGTCCTCAAACAAAACCGAGGCGTAGCTCTGACA ACCTTCCCTCCATCGCGCCCAGACACAGGAGGGAGGCAGTGACCTGCCCTAAGCCTGCCT TTGTTAGAGAGATTACTGTACTCTGGAATTGGAGCAAAACCTTCAATTTCCAGGCTCTTT AAAGCACAAATTATGAAGAAAAGCTGGGAAAGTAAACCAGACTCCTCCGCCGGCTCCTCG TGAACATCCCCCTTCCCCGGCACCTCCCGGAGTGACGAGCACAGATCAGCGGCGGCGGCG CGGTGAACGCTGGCCCGCCTCTCACTCATTCCTCCTCTTCCCCCGAAAGGCTGAAGGCAG GGCCCTTCCAGTCCTCACAGCCTGCCCGCCTCCAGTCCCTCCGGGCGGTGAGGCGGCACG CTCCTTGGCACCGCCTGGCTTTATGGACAGGAATCGCAGTAGGCTTCCTCTGTAGGGTTC TGGACAAGCTGACTAGAGAGAGGTCGTGTATGTTTTTATTTGGTCAAGTATTTCTCACAT TTTGTTATCAGAGTACCATTCCAATCTCTTAACTTGCAGTCGTGCGGAAAACTTTTGTAA TGAGAGATCGTCATTGGGGGATTGAGCAGCATTTAATAAAGTCTATGTTTGTATTTTGCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCGGCCGCTGAGGTGCTGGCGGACCGGCCGGCTGGGGACCCGGGCTGCAGGGACGAGAGG CGCGTTCGGCGTCCGCACTCCCGCGTCCTCGCCTCAGTTGTCTAAACTTCGGGCTCCAGT CCNCCCGCCCTCCGCTCCCGGAGTCAACAACTTCTTTTTTTCCCTCCACCCCTGCCCCCG CCCTCCGTCAGCCCCGGGAGCTCGCCGCGCGGCGGGGACCAGGACTCGCCGGCCCTTAGA TGTGGCCGTGAGTCGGCGGGCGGCGAGGAGAAGCTCGGCGGCGCCCGGGAGCGGGAGGGC GGTGCGGCCGGAGGAACGGGGCGGAGGGGCGCGAGCGCTCGGCGCCTCTCCCCCGCCTCC TCCTCCTGCCGCTGCCCGTTCCGTGCAAGCAGCAGCCGGAGCTGCCAAGCGCCAGGGCCG CGGAGATGTCGTCGTCGTCGCCGCCGCCGGCGGCGGCTGCCAGCGCCGCCATCTCGGCCT CGGAGAAAGTGGACGGCTTCACCCGGAAATCGGTGCGCAAGGCGCAGAGGCAGAAGCGCT CTCAGGGCTCGTCGCAGTTCCGCAGCCAGGGCAGCCAGCCGGAGCTGCACCCCTTGCCCC AGCTCAAAGATGCCACTTCAAATGAACAACAAGAACTTTTCTGTCAGAAGTTGCAGCAGT GTTGCATACTGTTTGATTTCATGGACTCTGTTTCAGACTTGAAGAGCAAAGAAATTAAAA GAGCAACATTGAATGAACTGGTTGAGTATGTTTCAACTAATCGTGGTGTAATTGTTGAAT CAGCGTATTCTGATATAGTAAAAATGATCAGTGCTAACATCTTCCGAACTCTTCCTCCAA GTGATAATCCAGATTTTGATCCAGAAGAGGATGAGCCCACACTCGAGGCCTCTTGGCCTC ACATACAATTGGTGTATGAATTCTTCTTAAGATTTTTGGAGAGCCCTGATTTCCAGCCTA GCATTGCCAAGCGATACATTGATCAGAAATTTGTACAACAGCTCCTGGAGCTTTTTGATA GTGAAGATCCCAGAGAACGTGACTTCCTGAAGACGGTTCTGCATCGAATTTATGGGAAAT TTCTTGGATTAAGAGCATTCATCAGAAAACAAATTAACAACATTTTTCTCAGGTTTATAT ATGAAACAGAGCATTTCAATGGTGTTGCTGAGCTCCTTGAAATATTAGGAAGTATTATCA ATGGCTTTGCATTGCCACTGAAAGCAGAACATAAACAATTTCTAATGAAGGTTCTTATTC CTATGCATACTGCGAAAGGATTAGCTTTGTTTCATGCTCAGCTAGCCTACTGTGTTGTAC AGTTCCTGGAGAAAGATACAACACTAACAGAACCAGTGATCAGAGGATTGCTGAAATTTT GGCCAAAAACATGCAGTCAGAAAGAGGTGATGTTTTTAGGAGAAATTGAAGAAATCTTAG ATGTCATTGAACCAACACAATTCAAAAAAATTGAAGAGCCCCTTTTTAAGCAGATATCCA AGTGTGTATCCAGTTCTCATTTTCAGGTTGCAGAAAGGGCATTGTACTTCTGGAATAATG AATATATTCTTAGTTTGATTGAGGAGAACATTGATAAAATTCTGCCAATTATGTTTGGCA GTTTGTATAAAATCTCCAAAGAACACTGGAATCCGACCATTGTGGCGCTGGTGTACAACG TGCTGAAAACCCTCATGGAGATGAACGGCAAGCTTTTCGATGACCTTACGAGCTCATACA AGGCTGAAAGACAAAGGGAGAAAAAGAAGGAATTGGAACGTGAAGAATTATGGAAAAAAT TAGAGGAGCTAAAGCTAAAGAAAGCTCTAGAAAAGCAGAACAGTGCTTACAACATGCACA GTATCCTCAGCAATACAAGCGATGAATAAAAAAAGCCTGTCACCTCTGCTGGATAGGCGG TTTTGTACACTTTTTTGAAATGTGTAAAAATTATGAAACAAACCTCATCAGTATAATATA ATTAAAAAGCCAATTTTTTTTTTTTGGCAACTGTAAATGAAAAAAAAAAAATATATGGAC TAAACATAGCCCTGGGCTATATCATAGCCACAGTATATTGTAACCTTTGTCTAATCATTG ATTTGTGTCACTTCTGCAGTTTCACAGAAATGAATGAACTTTATCATCTACGATATGAGT GAACTAATTATGGGCGTGGTGAGAATCATGACTTGAATTCTGTTTGGGGTTGTGTTGCAC ATAGAGTAGTCTGCTCTGTATATTTTTCCCTTTTCTAATGTGCTTTTCACGTCGCTGCAG ACCTTAGTTACATCCTAGGAAAAAGATGTCCTCAAACAAAACCGAGGCGTAGCTCTGACA ACCTTCCCTCCATCGCGCCCAGACACAGGAGGGAGGCAGTGACCTGCCCTAAGCCTGCCT TTGTTAGAGAGATTACTGTACTCTGGAATTGGAGCAAAACCTTCAATTTCCAGGCTCTTT AAAGCACAAATTATGAAGAAAAGCTGGGAAAGTAAACCAGACTCCTCCGCCGGCTCCTCG TGAACATCCCCCTTCCCCGGCACCTCCCGGAGTGACGAGCACAGATCAGCGGCGGCGGCG CGGTGAACGCTGGCCCGCCTCTCACTCATTCCTCCTCTTCCCCCGAAAGGCTGAAGGCAG GGCCCTTCCAGTCCTCACAGCCTGCCCGCCTCCAGTCCCTCCGGGCGGTGAGGCGGCACG CTCCTTGGCACCGCCTGGCTTTATGGACAGGAATCGCAGTAGGCTTCCTCTGTAGGGTTC TGGACAAGCTGACTAGAGAGAGGTCGTGTATGTTTTTATTTGGTCAAGTATTTCTCACAT TTTGTTATCAGAGTACCATTCCAATCTCTTAACTTGCAGTCGTGCGGAAAACTTTTGTAA TGAGAGATCGTCATTGGGGGATTGAGCAGCATTTAATAAAGTCTATGTTTGTATTTTGCC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 6 entry(ies) | More info |
| Predicted RNA structure(s): 6 entry(ies) | Help | Less info |
| Predicted RNA structure(s): 6 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| Aligned organism(s): 138 entry(ies) | More info |
| Aligned organism(s): 138 entry(ies) | Help | Less info |
| 806-908, gnl|bosTau2|chr16 (53273047-53272945) | |
| 806-908, gnl|canFam2|chr7 (13494246-13494369) | |
| 806-908, gnl|canFam2|chr8 (41014828-41014964) | |
| 806-908, gnl|danRer3|chr20 (23578033-23577915) | |
| 806-908, gnl|danRer3|chr20 (23577915-23578032) | |
| 806-908, gnl|dasNov1|scaffold_5109 (76127-75993) | |
| 806-908, gnl|dasNov1|scaffold_79732 (2787-2680) | |
| 806-908, gnl|echTel1|scaffold_262862 (2997-2863) | |
| 806-908, gnl|echTel1|scaffold_314755 (113613-113736) | |
| 806-908, gnl|fr1|chrUn (84999402-84999535) | |
| 806-908, gnl|fr1|chrUn (80652724-80652595) | |
| 806-908, gnl|galGal2|chr3 (18309148-18309026) | |
| 806-908, gnl|hg17|chr1 (208895216-208895340) | |
| 806-908, gnl|Hg17|chr1 (208895233-208895335) | |
| 806-908, gnl|hg17|chr14 (62958446-62958580) | |
| 806-908, gnl|loxAfr1|scaffold_44742 (353-230) | |
| 806-908, gnl|loxAfr1|scaffold_62445 (35529-35395) | |
| 806-908, gnl|mm7|chr1 (190922266-190922144) | |
| 806-908, gnl|Mm7|chr1 (190922249-190922147) | |
| 806-908, gnl|mm7|chr12 (73451851-73451987) | |
| 806-908, gnl|monDom2|scaffold_13 (16221544-16221667) | |
| 806-908, gnl|monDom2|scaffold_8 (76947076-76947210) | |
| 806-908, gnl|oryCun1|scaffold_175195 (52113-52246) | |
| 806-908, gnl|oryCun1|scaffold_204785 (110915-110792) | |
| 806-908, gnl|panTro1|chr1 (192532178-192532302) | |
| 806-908, gnl|panTro1|chr15 (62518261-62518395) | |
| 806-908, gnl|rheMac2|chr1 (158073900-158073776) | |
| 806-908, gnl|rheMac2|chr7 (126413958-126414092) | |
| 806-908, gnl|rn3|chr13 (107618625-107618504) | |
| 806-908, gnl|rn3|chr6 (98095603-98095738) | |
| 806-908, gnl|tetNig1|chr10 (12721137-12721256) | |
| 806-908, gnl|tetNig1|chr14 (4219148-4219268) | |
| 806-908, gnl|xenTro1|scaffold_1474 (50455-50321) | |
| 806-908, gnl|xenTro1|scaffold_68 (1435708-1435612) | |
| 994-1134, gnl|bosTau2|chr10 (49209638-49209498) | |
| 994-1134, gnl|canFam2|chr8 (40992898-40993053) | |
| 994-1134, gnl|canFam2|chr8 (40992907-40993034) | |
| 994-1134, gnl|danRer3|chr13 (40355889-40355761) | |
| 994-1134, gnl|danRer3|chr20 (23580383-23580231) | |
| 994-1134, gnl|dasNov1|scaffold_220489 (1020-865) | |
| 994-1134, gnl|dasNov1|scaffold_220489 (1012-884) | |
| 994-1134, gnl|echTel1|scaffold_302231 (12989-12834) | |
| 994-1134, gnl|echTel1|scaffold_314336 (226992-227119) | |
| 994-1134, gnl|fr1|chrUn (165787959-165787820) | |
| 994-1134, gnl|fr1|chrUn (165787951-165787823) | |
| 994-1134, gnl|galGal2|chr5 (50132172-50132017) | |
| 994-1134, gnl|galGal2|chr5 (50132164-50132036) | |
| 994-1134, gnl|hg17|chr14 (62933052-62933207) | |
| 994-1134, gnl|Hg17|chr14 (62933195-62933055) | |
| 994-1134, gnl|hg17|chr7 (56147301-56147429) | |
| 994-1134, gnl|loxAfr1|scaffold_15269 (3155-3000) | |
| 994-1134, gnl|loxAfr1|scaffold_15269 (3147-3019) | |
| 994-1134, gnl|mm7|chr12 (73428184-73428343) | |
| 994-1134, gnl|mm7|chr12 (73428192-73428320) | |
| 994-1134, gnl|Mm7|chr12 (73428327-73428187) | |
| 994-1134, gnl|monDom2|scaffold_8 (76930750-76930908) | |
| 994-1134, gnl|monDom2|scaffold_8 (76930758-76930886) | |
| 994-1134, gnl|oryCun1|scaffold_175195 (21129-21284) | |
| 994-1134, gnl|oryCun1|scaffold_175195 (21137-21265) | |
| 994-1134, gnl|panTro1|chr15 (62491548-62491703) | |
| 994-1134, gnl|panTro1|chr6 (57844316-57844444) | |
| 994-1134, gnl|rheMac2|chr7 (126386881-126387034) | |
| 994-1134, gnl|rheMac2|chr7 (126386889-126387017) | |
| 994-1134, gnl|rn3|chr6 (98072235-98072394) | |
| 994-1134, gnl|rn3|chr6 (98072243-98072371) | |
| 994-1134, gnl|tetNig1|chr10 (12720056-12720195) | |
| 994-1134, gnl|tetNig1|chr10 (12720064-12720192) | |
| 994-1134, gnl|xenTro1|scaffold_1474 (60417-60265) | |
| 994-1134, gnl|xenTro1|scaffold_1474 (60409-60281) | |
| 1191-1304, gnl|bosTau2|chr16 (53251366-53251253) | |
| 1191-1304, gnl|canFam2|chr7 (13514101-13514249) | |
| 1191-1304, gnl|danRer3|chr20 (23581627-23581757) | |
| 1191-1304, gnl|dasNov1|scaffold_92287 (5799-5934) | |
| 1191-1304, gnl|echTel1|scaffold_314755 (132769-132909) | |
| 1191-1304, gnl|fr1|chrUn (80649858-80649716) | |
| 1191-1304, gnl|galGal2|chr3 (18301886-18301739) | |
| 1191-1304, gnl|hg17|chr1 (208910105-208910253) | |
| 1191-1304, gnl|Hg17|chr1 (208910124-208910237) | |
| 1191-1304, gnl|loxAfr1|scaffold_21586 (44135-43990) | |
| 1191-1304, gnl|mm7|chr1 (190910524-190910376) | |
| 1191-1304, gnl|Mm7|chr1 (190910503-190910390) | |
| 1191-1304, gnl|monDom2|scaffold_13 (16234366-16234508) | |
| 1191-1304, gnl|oryCun1|scaffold_109221 (10721-10571) | |
| 1191-1304, gnl|panTro1|chr1 (192547085-192547233) | |
| 1191-1304, gnl|rheMac2|chr1 (158056426-158056278) | |
| 1191-1304, gnl|rn3|chr13 (107607658-107607510) | |
| 1191-1304, gnl|tetNig1|chr14 (4221657-4221795) | |
| 1191-1304, gnl|xenTro1|scaffold_68 (1422111-1421965) | |
| 1517-1655, gnl|bosTau2|chr16 (53243852-53243714) | |
| 1517-1655, gnl|canFam2|chr7 (13522443-13522603) | |
| 1517-1655, gnl|danRer3|chr20 (23583522-23583672) | |
| 1517-1655, gnl|dasNov1|scaffold_11712 (23199-23041) | |
| 1517-1655, gnl|echTel1|scaffold_314755 (137648-137808) | |
| 1517-1655, gnl|fr1|chrUn (80648849-80648684) | |
| 1517-1655, gnl|galGal2|chr3 (18295992-18295850) | |
| 1517-1655, gnl|hg17|chr1 (208918885-208919047) | |
| 1517-1655, gnl|Hg17|chr1 (208918883-208919022) | |
| 1517-1655, gnl|loxAfr1|scaffold_15530 (3379-3517) | |
| 1517-1655, gnl|mm7|chr1 (190908175-190908024) | |
| 1517-1655, gnl|Mm7|chr1 (190908173-190908036) | |
| 1517-1655, gnl|monDom2|scaffold_13 (16240552-16240710) | |
| 1517-1655, gnl|oryCun1|scaffold_109221 (7839-7677) | |
| 1517-1655, gnl|panTro1|chr1 (192555858-192556020) | |
| 1517-1655, gnl|rheMac2|chr1 (158047217-158047055) | |
| 1517-1655, gnl|rn3|chr13 (107605483-107605333) | |
| 1517-1655, gnl|tetNig1|chr14 (4223209-4223362) | |
| 1517-1655, gnl|xenTro1|scaffold_68 (1413406-1413258) | |
| 1755-2554, gnl|bosTau2|chr16 (53240842-53240051) | |
| 1755-2554, gnl|Hg17|chr1 (208922373-208923343) | |
| 1755-2554, gnl|Mm7|chr1 (190906617-190905720) | |
| 2687-2940, gnl|bosTau2|chr16 (53240054-53239799) | |
| 2687-2940, gnl|canFam2|chr7 (13525950-13526242) | |
| 2687-2940, gnl|canFam2|chr7 (13526211-13526019) | |
| 2687-2940, gnl|dasNov1|scaffold_11712 (20150-19851) | |
| 2687-2940, gnl|dasNov1|scaffold_11712 (19898-20082) | |
| 2687-2940, gnl|echTel1|scaffold_314755 (141247-141545) | |
| 2687-2940, gnl|echTel1|scaffold_314755 (141515-141315) | |
| 2687-2940, gnl|galGal2|chr3 (18291808-18291521) | |
| 2687-2940, gnl|galGal2|chr3 (18291562-18291743) | |
| 2687-2940, gnl|hg17|chr1 (208923328-208923631) | |
| 2687-2940, gnl|Hg17|chr1 (208923340-208923597) | |
| 2687-2940, gnl|hg17|chr18 (37228444-37228648) | |
| 2687-2940, gnl|loxAfr1|scaffold_204304 (341-42) | |
| 2687-2940, gnl|loxAfr1|scaffold_204304 (71-273) | |
| 2687-2940, gnl|mm7|chr1 (190905738-190905465) | |
| 2687-2940, gnl|Mm7|chr1 (190905722-190905484) | |
| 2687-2940, gnl|mm7|chrUn_random (8519801-8519981) | |
| 2687-2940, gnl|monDom2|scaffold_13 (16249132-16249429) | |
| 2687-2940, gnl|monDom2|scaffold_13 (16249400-16249202) | |
| 2687-2940, gnl|oryCun1|scaffold_109221 (3942-3641) | |
| 2687-2940, gnl|oryCun1|scaffold_109221 (3670-3873) | |
| 2687-2940, gnl|panTro1|chr1 (192560302-192560605) | |
| 2687-2940, gnl|panTro1|chr17 (33407827-33408031) | |
| 2687-2940, gnl|rheMac2|chr1 (158043050-158042747) | |
| 2687-2940, gnl|rheMac2|chr1 (158042777-158042976) | |
| 2687-2940, gnl|rn3|chr13 (107603117-107602847) | |
| 2687-2940, gnl|rn3|chr13 (107602864-107603051) | |
| 2687-2940, gnl|xenTro1|scaffold_68 (1404350-1404044) |
| Aligned organism(s): 138 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 806-908, gnl|bosTau2|chr16 (53273047-53272945) | |
| 806-908, gnl|canFam2|chr7 (13494246-13494369) | |
| 806-908, gnl|canFam2|chr8 (41014828-41014964) | |
| 806-908, gnl|danRer3|chr20 (23578033-23577915) | |
| 806-908, gnl|danRer3|chr20 (23577915-23578032) | |
| 806-908, gnl|dasNov1|scaffold_5109 (76127-75993) | |
| 806-908, gnl|dasNov1|scaffold_79732 (2787-2680) | |
| 806-908, gnl|echTel1|scaffold_262862 (2997-2863) | |
| 806-908, gnl|echTel1|scaffold_314755 (113613-113736) | |
| 806-908, gnl|fr1|chrUn (84999402-84999535) | |
| 806-908, gnl|fr1|chrUn (80652724-80652595) | |
| 806-908, gnl|galGal2|chr3 (18309148-18309026) | |
| 806-908, gnl|hg17|chr1 (208895216-208895340) | |
| 806-908, gnl|Hg17|chr1 (208895233-208895335) | |
| 806-908, gnl|hg17|chr14 (62958446-62958580) | |
| 806-908, gnl|loxAfr1|scaffold_44742 (353-230) | |
| 806-908, gnl|loxAfr1|scaffold_62445 (35529-35395) | |
| 806-908, gnl|mm7|chr1 (190922266-190922144) | |
| 806-908, gnl|Mm7|chr1 (190922249-190922147) | |
| 806-908, gnl|mm7|chr12 (73451851-73451987) | |
| 806-908, gnl|monDom2|scaffold_13 (16221544-16221667) | |
| 806-908, gnl|monDom2|scaffold_8 (76947076-76947210) | |
| 806-908, gnl|oryCun1|scaffold_175195 (52113-52246) | |
| 806-908, gnl|oryCun1|scaffold_204785 (110915-110792) | |
| 806-908, gnl|panTro1|chr1 (192532178-192532302) | |
| 806-908, gnl|panTro1|chr15 (62518261-62518395) | |
| 806-908, gnl|rheMac2|chr1 (158073900-158073776) | |
| 806-908, gnl|rheMac2|chr7 (126413958-126414092) | |
| 806-908, gnl|rn3|chr13 (107618625-107618504) | |
| 806-908, gnl|rn3|chr6 (98095603-98095738) | |
| 806-908, gnl|tetNig1|chr10 (12721137-12721256) | |
| 806-908, gnl|tetNig1|chr14 (4219148-4219268) | |
| 806-908, gnl|xenTro1|scaffold_1474 (50455-50321) | |
| 806-908, gnl|xenTro1|scaffold_68 (1435708-1435612) | |
| 994-1134, gnl|bosTau2|chr10 (49209638-49209498) | |
| 994-1134, gnl|canFam2|chr8 (40992898-40993053) | |
| 994-1134, gnl|canFam2|chr8 (40992907-40993034) | |
| 994-1134, gnl|danRer3|chr13 (40355889-40355761) | |
| 994-1134, gnl|danRer3|chr20 (23580383-23580231) | |
| 994-1134, gnl|dasNov1|scaffold_220489 (1020-865) | |
| 994-1134, gnl|dasNov1|scaffold_220489 (1012-884) | |
| 994-1134, gnl|echTel1|scaffold_302231 (12989-12834) | |
| 994-1134, gnl|echTel1|scaffold_314336 (226992-227119) | |
| 994-1134, gnl|fr1|chrUn (165787959-165787820) | |
| 994-1134, gnl|fr1|chrUn (165787951-165787823) | |
| 994-1134, gnl|galGal2|chr5 (50132172-50132017) | |
| 994-1134, gnl|galGal2|chr5 (50132164-50132036) | |
| 994-1134, gnl|hg17|chr14 (62933052-62933207) | |
| 994-1134, gnl|Hg17|chr14 (62933195-62933055) | |
| 994-1134, gnl|hg17|chr7 (56147301-56147429) | |
| 994-1134, gnl|loxAfr1|scaffold_15269 (3155-3000) | |
| 994-1134, gnl|loxAfr1|scaffold_15269 (3147-3019) | |
| 994-1134, gnl|mm7|chr12 (73428184-73428343) | |
| 994-1134, gnl|mm7|chr12 (73428192-73428320) | |
| 994-1134, gnl|Mm7|chr12 (73428327-73428187) | |
| 994-1134, gnl|monDom2|scaffold_8 (76930750-76930908) | |
| 994-1134, gnl|monDom2|scaffold_8 (76930758-76930886) | |
| 994-1134, gnl|oryCun1|scaffold_175195 (21129-21284) | |
| 994-1134, gnl|oryCun1|scaffold_175195 (21137-21265) | |
| 994-1134, gnl|panTro1|chr15 (62491548-62491703) | |
| 994-1134, gnl|panTro1|chr6 (57844316-57844444) | |
| 994-1134, gnl|rheMac2|chr7 (126386881-126387034) | |
| 994-1134, gnl|rheMac2|chr7 (126386889-126387017) | |
| 994-1134, gnl|rn3|chr6 (98072235-98072394) | |
| 994-1134, gnl|rn3|chr6 (98072243-98072371) | |
| 994-1134, gnl|tetNig1|chr10 (12720056-12720195) | |
| 994-1134, gnl|tetNig1|chr10 (12720064-12720192) | |
| 994-1134, gnl|xenTro1|scaffold_1474 (60417-60265) | |
| 994-1134, gnl|xenTro1|scaffold_1474 (60409-60281) | |
| 1191-1304, gnl|bosTau2|chr16 (53251366-53251253) | |
| 1191-1304, gnl|canFam2|chr7 (13514101-13514249) | |
| 1191-1304, gnl|danRer3|chr20 (23581627-23581757) | |
| 1191-1304, gnl|dasNov1|scaffold_92287 (5799-5934) | |
| 1191-1304, gnl|echTel1|scaffold_314755 (132769-132909) | |
| 1191-1304, gnl|fr1|chrUn (80649858-80649716) | |
| 1191-1304, gnl|galGal2|chr3 (18301886-18301739) | |
| 1191-1304, gnl|hg17|chr1 (208910105-208910253) | |
| 1191-1304, gnl|Hg17|chr1 (208910124-208910237) | |
| 1191-1304, gnl|loxAfr1|scaffold_21586 (44135-43990) | |
| 1191-1304, gnl|mm7|chr1 (190910524-190910376) | |
| 1191-1304, gnl|Mm7|chr1 (190910503-190910390) | |
| 1191-1304, gnl|monDom2|scaffold_13 (16234366-16234508) | |
| 1191-1304, gnl|oryCun1|scaffold_109221 (10721-10571) | |
| 1191-1304, gnl|panTro1|chr1 (192547085-192547233) | |
| 1191-1304, gnl|rheMac2|chr1 (158056426-158056278) | |
| 1191-1304, gnl|rn3|chr13 (107607658-107607510) | |
| 1191-1304, gnl|tetNig1|chr14 (4221657-4221795) | |
| 1191-1304, gnl|xenTro1|scaffold_68 (1422111-1421965) | |
| 1517-1655, gnl|bosTau2|chr16 (53243852-53243714) | |
| 1517-1655, gnl|canFam2|chr7 (13522443-13522603) | |
| 1517-1655, gnl|danRer3|chr20 (23583522-23583672) | |
| 1517-1655, gnl|dasNov1|scaffold_11712 (23199-23041) | |
| 1517-1655, gnl|echTel1|scaffold_314755 (137648-137808) | |
| 1517-1655, gnl|fr1|chrUn (80648849-80648684) | |
| 1517-1655, gnl|galGal2|chr3 (18295992-18295850) | |
| 1517-1655, gnl|hg17|chr1 (208918885-208919047) | |
| 1517-1655, gnl|Hg17|chr1 (208918883-208919022) | |
| 1517-1655, gnl|loxAfr1|scaffold_15530 (3379-3517) | |
| 1517-1655, gnl|mm7|chr1 (190908175-190908024) | |
| 1517-1655, gnl|Mm7|chr1 (190908173-190908036) | |
| 1517-1655, gnl|monDom2|scaffold_13 (16240552-16240710) | |
| 1517-1655, gnl|oryCun1|scaffold_109221 (7839-7677) | |
| 1517-1655, gnl|panTro1|chr1 (192555858-192556020) | |
| 1517-1655, gnl|rheMac2|chr1 (158047217-158047055) | |
| 1517-1655, gnl|rn3|chr13 (107605483-107605333) | |
| 1517-1655, gnl|tetNig1|chr14 (4223209-4223362) | |
| 1517-1655, gnl|xenTro1|scaffold_68 (1413406-1413258) | |
| 1755-2554, gnl|bosTau2|chr16 (53240842-53240051) | |
| 1755-2554, gnl|Hg17|chr1 (208922373-208923343) | |
| 1755-2554, gnl|Mm7|chr1 (190906617-190905720) | |
| 2687-2940, gnl|bosTau2|chr16 (53240054-53239799) | |
| 2687-2940, gnl|canFam2|chr7 (13525950-13526242) | |
| 2687-2940, gnl|canFam2|chr7 (13526211-13526019) | |
| 2687-2940, gnl|dasNov1|scaffold_11712 (20150-19851) | |
| 2687-2940, gnl|dasNov1|scaffold_11712 (19898-20082) | |
| 2687-2940, gnl|echTel1|scaffold_314755 (141247-141545) | |
| 2687-2940, gnl|echTel1|scaffold_314755 (141515-141315) | |
| 2687-2940, gnl|galGal2|chr3 (18291808-18291521) | |
| 2687-2940, gnl|galGal2|chr3 (18291562-18291743) | |
| 2687-2940, gnl|hg17|chr1 (208923328-208923631) | |
| 2687-2940, gnl|Hg17|chr1 (208923340-208923597) | |
| 2687-2940, gnl|hg17|chr18 (37228444-37228648) | |
| 2687-2940, gnl|loxAfr1|scaffold_204304 (341-42) | |
| 2687-2940, gnl|loxAfr1|scaffold_204304 (71-273) | |
| 2687-2940, gnl|mm7|chr1 (190905738-190905465) | |
| 2687-2940, gnl|Mm7|chr1 (190905722-190905484) | |
| 2687-2940, gnl|mm7|chrUn_random (8519801-8519981) | |
| 2687-2940, gnl|monDom2|scaffold_13 (16249132-16249429) | |
| 2687-2940, gnl|monDom2|scaffold_13 (16249400-16249202) | |
| 2687-2940, gnl|oryCun1|scaffold_109221 (3942-3641) | |
| 2687-2940, gnl|oryCun1|scaffold_109221 (3670-3873) | |
| 2687-2940, gnl|panTro1|chr1 (192560302-192560605) | |
| 2687-2940, gnl|panTro1|chr17 (33407827-33408031) | |
| 2687-2940, gnl|rheMac2|chr1 (158043050-158042747) | |
| 2687-2940, gnl|rheMac2|chr1 (158042777-158042976) | |
| 2687-2940, gnl|rn3|chr13 (107603117-107602847) | |
| 2687-2940, gnl|rn3|chr13 (107602864-107603051) | |
| 2687-2940, gnl|xenTro1|scaffold_68 (1404350-1404044) |
| Expressed library(ies): 31 entry(ies) | More info |
| Expressed library(ies): 31 entry(ies) | Help | Less info |
| sme (0.91631) | |
| cst (0.560146) | |
| pty (0.285429) | |
| cga (0.279096) | |
| hlv (0.278513) | |
| nms (0.213858) | |
| mas (0.210305) | |
| tes (0.207814) | |
| col (0.195008) | |
| cmu (0.186393) | |
| sag (0.182715) | |
| fty (0.17584) | |
| ton (0.1755) | |
| fbs (0.175346) | |
| eye (0.170503) | |
| fhi (0.169578) | |
| cki (0.165235) | |
| csp (0.161186) | |
| isp (0.150376) | |
| fat (0.147427) | |
| ski (0.146735) | |
| lin (0.145603) | |
| lnt (0.142308) | |
| che (0.136314) | |
| ste (0.135208) | |
| pla (0.133672) | |
| nmm (0.132802) | |
| cbl (0.114797) | |
| jca (0.11396) | |
| eje (0.0988338) | |
| ldo (0.0970026) |
| Expressed library(ies): 31 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| sme (0.91631) | |
| cst (0.560146) | |
| pty (0.285429) | |
| cga (0.279096) | |
| hlv (0.278513) | |
| nms (0.213858) | |
| mas (0.210305) | |
| tes (0.207814) | |
| col (0.195008) | |
| cmu (0.186393) | |
| sag (0.182715) | |
| fty (0.17584) | |
| ton (0.1755) | |
| fbs (0.175346) | |
| eye (0.170503) | |
| fhi (0.169578) | |
| cki (0.165235) | |
| csp (0.161186) | |
| isp (0.150376) | |
| fat (0.147427) | |
| ski (0.146735) | |
| lin (0.145603) | |
| lnt (0.142308) | |
| che (0.136314) | |
| ste (0.135208) | |
| pla (0.133672) | |
| nmm (0.132802) | |
| cbl (0.114797) | |
| jca (0.11396) | |
| eje (0.0988338) | |
| ldo (0.0970026) |