Ss1.1-LyN1-MLN01H040045.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATTAAAAGGCAGAATGCTGAAATGCAACTAGCTATTGCTAAAGATGAGGCAGAGAAAATT AAAAAGAAGAGAAGCACAGTCTTTGGGACCCTGCATGTTGCACATAGCTCCTCCCTAGAT GAAGTAGATCATAAAATTCTGGAAGCAAAGAAAGCTCTCTCTGAGTTGACAACTTGTTTA CGAGAACGACTTTTTCGCTGGCAGCAGATTGAGAAGATCTGTGGCTTTCAGATAGCCCAT AACTCGGGACTCCCCAGCCTCACCTCTTCCCTCTATTCTGATCACAGCTGGGTGGTGATG CCCAGAGTCTCCATTCCACCCTACCCCATTGCTGGAGGAGTTGATGATTTAGATGAAGAC ACACCCCCAATAGTGTCACAGTTTCCTGGGACCATGGCTAAGCCTGCTGCATCACTGGCC AGAAGCAGCAGCTTGTGTCGCTCCCGCCGCAGCATCGTGCCGTCCTCGCCGCAGTCTCAG CGCGCTCAGCTTCCTCCACACGCTCCCCACCCGTCACACCCTCGGCACCCCCACCACCCC CAGCACACACAGCACTCGTTGCCTTCCCCCGATCCAGATATCCTCTCAGTGTCAAGTTGC CCCGCTCTTTATCGAAATGAAGAGGAGGAGGAGGCCATTTACTTCTCTGCTGAAAAGCAA TGGGAAGTGCCAGACACAGCCTCAGAATGTGACTCCTTGAATTCTTCCATCGGAAGGAAA CAGTCTCCTCCTTCCAGCCTTGAGATCTACCACACGTTGTCGCCTCGAAAAATCTCGAAA GATGAGCTCTCTCTGGAGGATTCCTCCAGAGGAGAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATTAAAAGGCAGAATGCTGAAATGCAACTAGCTATTGCTAAAGATGAGGCAGAGAAAATT AAAAAGAAGAGAAGCACAGTCTTTGGGACCCTGCATGTTGCACATAGCTCCTCCCTAGAT GAAGTAGATCATAAAATTCTGGAAGCAAAGAAAGCTCTCTCTGAGTTGACAACTTGTTTA CGAGAACGACTTTTTCGCTGGCAGCAGATTGAGAAGATCTGTGGCTTTCAGATAGCCCAT AACTCGGGACTCCCCAGCCTCACCTCTTCCCTCTATTCTGATCACAGCTGGGTGGTGATG CCCAGAGTCTCCATTCCACCCTACCCCATTGCTGGAGGAGTTGATGATTTAGATGAAGAC ACACCCCCAATAGTGTCACAGTTTCCTGGGACCATGGCTAAGCCTGCTGCATCACTGGCC AGAAGCAGCAGCTTGTGTCGCTCCCGCCGCAGCATCGTGCCGTCCTCGCCGCAGTCTCAG CGCGCTCAGCTTCCTCCACACGCTCCCCACCCGTCACACCCTCGGCACCCCCACCACCCC CAGCACACACAGCACTCGTTGCCTTCCCCCGATCCAGATATCCTCTCAGTGTCAAGTTGC CCCGCTCTTTATCGAAATGAAGAGGAGGAGGAGGCCATTTACTTCTCTGCTGAAAAGCAA TGGGAAGTGCCAGACACAGCCTCAGAATGTGACTCCTTGAATTCTTCCATCGGAAGGAAA CAGTCTCCTCCTTCCAGCCTTGAGATCTACCACACGTTGTCGCCTCGAAAAATCTCGAAA GATGAGCTCTCTCTGGAGGATTCCTCCAGAGGAGAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 47-154, gnl|bosTau2|chr6 (24736745-24736852) | |
| 47-154, gnl|canFam2|chr3 (86397783-86397649) | |
| 47-154, gnl|danRer3|chr7 (42678915-42679042) | |
| 47-154, gnl|dasNov1|scaffold_133 (157265-157132) | |
| 47-154, gnl|echTel1|scaffold_322351 (125720-125852) | |
| 47-154, gnl|fr1|chrUn (242199557-242199679) | |
| 47-154, gnl|galGal2|chr4 (73342713-73342578) | |
| 47-154, gnl|hg17|chr4 (26686297-26686429) | |
| 47-154, gnl|Hg17|chr4 (26686317-26686424) | |
| 47-154, gnl|loxAfr1|scaffold_18161 (35004-35137) | |
| 47-154, gnl|mm7|chr5 (53483823-53483954) | |
| 47-154, gnl|Mm7|chr5 (53483842-53483949) | |
| 47-154, gnl|monDom2|scaffold_10 (11067544-11067410) | |
| 47-154, gnl|oryCun1|scaffold_201120 (107734-107867) | |
| 47-154, gnl|panTro1|chr3 (27267350-27267482) | |
| 47-154, gnl|rheMac2|chr5 (21777061-21777194) | |
| 47-154, gnl|rn3|chr14 (61643659-61643528) | |
| 47-154, gnl|tetNig1|chr20 (560233-560120) | |
| 47-154, gnl|xenTro1|scaffold_536 (76355-76221) | |
| 381-663, gnl|bosTau2|chr6 (24748721-24749003) | |
| 381-663, gnl|Hg17|chr4 (26695594-26695876) | |
| 381-663, gnl|Mm7|chr5 (53489221-53489500) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 47-154, gnl|bosTau2|chr6 (24736745-24736852) | |
| 47-154, gnl|canFam2|chr3 (86397783-86397649) | |
| 47-154, gnl|danRer3|chr7 (42678915-42679042) | |
| 47-154, gnl|dasNov1|scaffold_133 (157265-157132) | |
| 47-154, gnl|echTel1|scaffold_322351 (125720-125852) | |
| 47-154, gnl|fr1|chrUn (242199557-242199679) | |
| 47-154, gnl|galGal2|chr4 (73342713-73342578) | |
| 47-154, gnl|hg17|chr4 (26686297-26686429) | |
| 47-154, gnl|Hg17|chr4 (26686317-26686424) | |
| 47-154, gnl|loxAfr1|scaffold_18161 (35004-35137) | |
| 47-154, gnl|mm7|chr5 (53483823-53483954) | |
| 47-154, gnl|Mm7|chr5 (53483842-53483949) | |
| 47-154, gnl|monDom2|scaffold_10 (11067544-11067410) | |
| 47-154, gnl|oryCun1|scaffold_201120 (107734-107867) | |
| 47-154, gnl|panTro1|chr3 (27267350-27267482) | |
| 47-154, gnl|rheMac2|chr5 (21777061-21777194) | |
| 47-154, gnl|rn3|chr14 (61643659-61643528) | |
| 47-154, gnl|tetNig1|chr20 (560233-560120) | |
| 47-154, gnl|xenTro1|scaffold_536 (76355-76221) | |
| 381-663, gnl|bosTau2|chr6 (24748721-24749003) | |
| 381-663, gnl|Hg17|chr4 (26695594-26695876) | |
| 381-663, gnl|Mm7|chr5 (53489221-53489500) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.10408) |