Ss1.1-LyN2-AR044E09LN05ME09S.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGACCTGATAAAAAATAGGAATGAAGCTGCAGGAATTTTTCACTCAACAGTTTGACACCA GCAAACGAGCTCTGTCTACCTGGGGACCAGTTCCTTATCTTCCACCTAAGACAGTGACTA ATAACCTAGAGAAAAGTTCACAAGAGCAATTGCTCGATGCAGCTCATCATCGACATTGGC CCGGAGTATTGAAGGTGGTATCAGGATGCCACATATCCTTATTTCAGATTCCATTACCAG AAGATGGAATGCAGTTTGGAGGATCAATGAGCTTACATGGAAATCACATGACGCTAGCTT GTTTTCATGGTCCAAATTTCCGTTCAAAATCATGGGCCCTTTTTCACTTAGAAGAACCAA ATATTGCTTTTTGGACCGAAGCCCAGAAGATCTGGGAAGATGGCTCTAGTGATCATTCTA ------------AAACACTGGATT------------ATAACACCATGGTTACAAAACCAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGACCTGATAAAAAATAGGAATGAAGCTGCAGGAATTTTTCACTCAACAGTTTGACACCA GCAAACGAGCTCTGTCTACCTGGGGACCAGTTCCTTATCTTCCACCTAAGACAGTGACTA ATAACCTAGAGAAAAGTTCACAAGAGCAATTGCTCGATGCAGCTCATCATCGACATTGGC CCGGAGTATTGAAGGTGGTATCAGGATGCCACATATCCTTATTTCAGATTCCATTACCAG AAGATGGAATGCAGTTTGGAGGATCAATGAGCTTACATGGAAATCACATGACGCTAGCTT GTTTTCATGGTCCAAATTTCCGTTCAAAATCATGGGCCCTTTTTCACTTAGAAGAACCAA ATATTGCTTTTTGGACCGAAGCCCAGAAGATCTGGGAAGATGGCTCTAGTGATCATTCTA ------------AAACACTGGATT------------ATAACACCATGGTTACAAAACCAT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 151-309, + strand, RNAz p=0.533489 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 151-309, + strand, RNAz p=0.533489 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of AB029032, + |
| Aligned organism(s): 6 entry(ies) | More info |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
| 1-150, gnl|bosTau2|chr17 (20531808-20531660) | |
| 1-150, gnl|Hg17|chr4 (123628686-123628834) | |
| 1-150, gnl|Mm7|chr3 (36852554-36852702) | |
| 151-403, gnl|bosTau2|chr17 (20528774-20528522) | |
| 151-403, gnl|Hg17|chr4 (123631664-123631916) | |
| 151-403, gnl|Mm7|chr3 (36855362-36855614) |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-150, gnl|bosTau2|chr17 (20531808-20531660) | |
| 1-150, gnl|Hg17|chr4 (123628686-123628834) | |
| 1-150, gnl|Mm7|chr3 (36852554-36852702) | |
| 151-403, gnl|bosTau2|chr17 (20528774-20528522) | |
| 151-403, gnl|Hg17|chr4 (123631664-123631916) | |
| 151-403, gnl|Mm7|chr3 (36855362-36855614) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cbl (0.229595) |