Non-Coding RNA Search

Ss1.1-LyN2-AR046C09LN05OC09S.5

Sequence:


               
               GCGGCTCGGCGTGGCTGGGCTGGGTTCGGCGGCGTCCCCATGGCCGCGGCCGGCTGGCGG
GACGGCTCTGGCCAAGAGAAGTACCGGCTCGTGGTGGTCGGTGGAGGCGGCGTGGGCAAG
TCGGCGCTCACCATCCAGTTCATCCAGTCCTATTTTGTAACGGATTATGATCCAACCATC
GAGGATTCCTACACAAAGCAGTGTGTGATAGATGACCGGGCAGCCCGGCTAGATATTCTG
GATACAGCAGGACAAGAGGAGTTTGGAGCTATGCGAGAACAGTATATGAGAACTGGCGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGCTCGGCGTGGCTGGGCTGGGTTCGGCGGCGTCCCCATGGCCGCGGCCGGCTGGCGG
GACGGCTCTGGCCAAGAGAAGTACCGGCTCGTGGTGGTCGGTGGAGGCGGCGTGGGCAAG
TCGGCGCTCACCATCCAGTTCATCCAGTCCTATTTTGTAACGGATTATGATCCAACCATC
GAGGATTCCTACACAAAGCAGTGTGTGATAGATGACCGGGCAGCCCGGCTAGATATTCTG
GATACAGCAGGACAAGAGGAGTTTGGAGCTATGCGAGAACAGTATATGAGAACTGGCGAG

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|54400368|ref|NP_001005931.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|54400368|ref|NP_001005931.1|

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-147, gnl|bosTau2|chr15 (22571304-22571450)
               

               
               1-147, gnl|Hg17|chr11 (14337031-14336885)
               

               
               1-147, gnl|Mm7|chr7 (110033625-110033490)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-147, gnl|bosTau2|chr15 (22571304-22571450)
               

               
               1-147, gnl|Hg17|chr11 (14337031-14336885)
               

               
               1-147, gnl|Mm7|chr7 (110033625-110033490)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

Help | Less info


               
               nco (0.161734)
               

               
               csp (0.161186)
               

               
               ski (0.146735)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nco (0.161734)
               

               
               csp (0.161186)
               

               
               ski (0.146735)

	1-147, gnl\|bosTau2\|chr15 (22571304-22571450)
	1-147, gnl\|Hg17\|chr11 (14337031-14336885)
	1-147, gnl\|Mm7\|chr7 (110033625-110033490)