Non-Coding RNA Search

Ss1.1-LyN2-AR047F06LN05QF06S.5

Sequence:


               
               CCCCGTGTCCGCGGGCTTGGGGTGGTCCCGGGGGGGCAGAGCCGGGCCTCGGTAGCCTGG
CCAGAAACCCCGAGTGGAGGGGCTCGTCTCCCACGAGGAGACGGAGGCCAACGCAGCCGT
TCTCCCTCCGTGCGGCACGGGCCGCAGCTGCCGGGGGCCCGGCTTCACGGAGTCTCATCC
GCTCACAGCAGCGCCCAGGCGACGCCGTGAGTGGCCTGCATGGGGCTCTGCGTCCGGGGC
TTCCGGGGCAGGTGCCCTGGTTTTCTTCTCGGCCCCTCTCACCCCGGCCTCCTCTGTCCG
TCCCGTCCATGCGCTCAGGACCCCCTGTTCAGATTCTTTGAGAGAGAGGTGAAGATGGGC
GCCAGGCTGCTGCAGGACGTGCGCCAGGACCTGGCTGACGTGGTGCAGGTGTGCGAGGGC
AAGAAGAAGCAGACCAACTACCTGCGGACGCTCATCAACGAGCTGGTGAAAGGTGCGCGC
TCGCTGCCGCGGGGTCGGGTCCCGGCGGGGCGGGCTCGGGCTCCCCAAGAACTCGTTCTC
TCCCTCCGCTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCCGTGTCCGCGGGCTTGGGGTGGTCCCGGGGGGGCAGAGCCGGGCCTCGGTAGCCTGG
CCAGAAACCCCGAGTGGAGGGGCTCGTCTCCCACGAGGAGACGGAGGCCAACGCAGCCGT
TCTCCCTCCGTGCGGCACGGGCCGCAGCTGCCGGGGGCCCGGCTTCACGGAGTCTCATCC
GCTCACAGCAGCGCCCAGGCGACGCCGTGAGTGGCCTGCATGGGGCTCTGCGTCCGGGGC
TTCCGGGGCAGGTGCCCTGGTTTTCTTCTCGGCCCCTCTCACCCCGGCCTCCTCTGTCCG
TCCCGTCCATGCGCTCAGGACCCCCTGTTCAGATTCTTTGAGAGAGAGGTGAAGATGGGC
GCCAGGCTGCTGCAGGACGTGCGCCAGGACCTGGCTGACGTGGTGCAGGTGTGCGAGGGC
AAGAAGAAGCAGACCAACTACCTGCGGACGCTCATCAACGAGCTGGTGAAAGGTGCGCGC
TCGCTGCCGCGGGGTCGGGTCCCGGCGGGGCGGGCTCGGGCTCCCCAAGAACTCGTTCTC
TCCCTCCGCTGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               273-493, gnl|bosTau2|chr21 (46531061-46531277)
               

               
               273-493, gnl|Hg17|chr14 (101584574-101584787)
               

               
               273-493, gnl|Mm7|chr12 (108183316-108183520)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               273-493, gnl|bosTau2|chr21 (46531061-46531277)
               

               
               273-493, gnl|Hg17|chr14 (101584574-101584787)
               

               
               273-493, gnl|Mm7|chr12 (108183316-108183520)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	273-493, gnl\|bosTau2\|chr21 (46531061-46531277)
	273-493, gnl\|Hg17\|chr14 (101584574-101584787)
	273-493, gnl\|Mm7\|chr12 (108183316-108183520)