Non-Coding RNA Search

Ss1.1-LyN2-AR048B09LN05RB09S.5

Sequence:


               
               AGGATATTACTTATGTGTTTTATAGTCTTTAACTGTTTCATGTGATTTTTGTGTCATTAC
TATTTATCAAAATACTATTTTTGCACTGAAAACTGTAATTTGTATATAGTTCAGAAATTG
AGCGTGAGCTCAAGATGTAATGGAGCCTTCTTAGGGGATACCAAAGTTGGCAACTTTCTT
CGCTTTACAATTTGTAAATGTTTTTAATCAAATAATCATGGGATCATCATTCTAGAGGCT
TCCAACTTATTAATGATGTATTTGATGATGTATTTGAGTCAATTCACAACTTGTTTATTT
GCCAAGGTTTGTTCATAGCACTGTGTATAGTAGAAAAGGAAAACATGCGCACACACACAC
ACACACACACACACACACACACACACACACACACGGTTGTGGTTCTCAGTACCAAGCTAT
AGGACCTTGTTATAGATCAAACAGTATTATAAACAGATCTCTTTTACTCGATGAGTCCAA
ACTAACCTCCATTGAAATCTCTGCAATAATCTTTTTAGTCAACGCCAGGTTATATGCATC
AAGAACCTGAATAAACCATGCTCTTGCATTAATTCTTGTTCACACATTTCATATGCACAT
CATGTTTTCCCCAAATGTAACAACCACATATGATAAAAACAAATGAGAATGTTCTTTAGG
ACCGTTTGATGTACCTTTTAGCTGGTTCCTTCTTAGCTGTGAAGAGCATTTATTATCTCA
AATAGTGGCTCCATTGCGCACATATTTGTAACTGTATTTGCCTGTGTGTATGCGTCTACC
TCTTTTAGCGTGGAAGTATTTTAATCTTTGATTTTGCAAACATCAAATTAGCTGCCAGAT
TATTTTTCCCTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGATATTACTTATGTGTTTTATAGTCTTTAACTGTTTCATGTGATTTTTGTGTCATTAC
TATTTATCAAAATACTATTTTTGCACTGAAAACTGTAATTTGTATATAGTTCAGAAATTG
AGCGTGAGCTCAAGATGTAATGGAGCCTTCTTAGGGGATACCAAAGTTGGCAACTTTCTT
CGCTTTACAATTTGTAAATGTTTTTAATCAAATAATCATGGGATCATCATTCTAGAGGCT
TCCAACTTATTAATGATGTATTTGATGATGTATTTGAGTCAATTCACAACTTGTTTATTT
GCCAAGGTTTGTTCATAGCACTGTGTATAGTAGAAAAGGAAAACATGCGCACACACACAC
ACACACACACACACACACACACACACACACACACGGTTGTGGTTCTCAGTACCAAGCTAT
AGGACCTTGTTATAGATCAAACAGTATTATAAACAGATCTCTTTTACTCGATGAGTCCAA
ACTAACCTCCATTGAAATCTCTGCAATAATCTTTTTAGTCAACGCCAGGTTATATGCATC
AAGAACCTGAATAAACCATGCTCTTGCATTAATTCTTGTTCACACATTTCATATGCACAT
CATGTTTTCCCCAAATGTAACAACCACATATGATAAAAACAAATGAGAATGTTCTTTAGG
ACCGTTTGATGTACCTTTTAGCTGGTTCCTTCTTAGCTGTGAAGAGCATTTATTATCTCA
AATAGTGGCTCCATTGCGCACATATTTGTAACTGTATTTGCCTGTGTGTATGCGTCTACC
TCTTTTAGCGTGGAAGTATTTTAATCTTTGATTTTGCAAACATCAAATTAGCTGCCAGAT
TATTTTTCCCTA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-366, gnl|bosTau2|chr22 (23608394-23608744)
               

               
               1-366, gnl|Hg17|chr3 (69109330-69108503)
               

               
               1-366, gnl|Mm7|chr6 (97199893-97199592)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-366, gnl|bosTau2|chr22 (23608394-23608744)
               

               
               1-366, gnl|Hg17|chr3 (69109330-69108503)
               

               
               1-366, gnl|Mm7|chr6 (97199893-97199592)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               tes (0.207814)
               

               
               kid (0.129735)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)
               

               
               kid (0.129735)

	1-366, gnl\|bosTau2\|chr22 (23608394-23608744)
	1-366, gnl\|Hg17\|chr3 (69109330-69108503)
	1-366, gnl\|Mm7\|chr6 (97199893-97199592)