Non-Coding RNA Search

Ss1.1-LyN2-AR063E06LN05AGD09S.5

Sequence:


               
               GAAAAGCTTGATTTGGGGCCTTTTGCACAAACGCAAAATGCGCATGCATTTCCTGATGCA
CAGACCTGTCTGCCTCCCAGGGACAGCTGGGGAGCTGTGTCAGTTCTGCCCGACTCCACC
CAAGTGACTTTGCAGCGATGTACCCAGCTAATGTCTCTCCACCTCACCCTCCACGAAGGA
ATTACTGTCTGTCCCCAAATACAGTCATTAAAATGAGTGAAGTAACAATCATTAAGTTAT
ATTTTTTGAAAAAAAAAAAGTTCTCAGCATTTAATTATTGACTGTGGCGTGAGAGGATTT
AGGTAAGTTGATAATGCCGACTTTATGTAATTTATTTTTACTAGGCAATTACGGGCTGCA
TTACATCCTGGCAGCAAGGTATTGTGGGGCATCTTATTAAGCATAAAGCCAGTAAACACT
GATGAACAATTTTGCTGAACTAGGCATGCAATTTAGAAAGCAATAATACACAAATCCAAT
TTGGTACACAATGGATACCGCAGCACGTCAGCACATGTAACTATCACAGCCTGCAAATTA
AATTGGGACGGTCCTTTTTGCAAC------------GATTAAATATATTTTCCCCCTCAA
------------CTGACCACAAATATAAATATGTGTGTATGTGTTTGN------------
GGACATACACAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAAAGCTTGATTTGGGGCCTTTTGCACAAACGCAAAATGCGCATGCATTTCCTGATGCA
CAGACCTGTCTGCCTCCCAGGGACAGCTGGGGAGCTGTGTCAGTTCTGCCCGACTCCACC
CAAGTGACTTTGCAGCGATGTACCCAGCTAATGTCTCTCCACCTCACCCTCCACGAAGGA
ATTACTGTCTGTCCCCAAATACAGTCATTAAAATGAGTGAAGTAACAATCATTAAGTTAT
ATTTTTTGAAAAAAAAAAAGTTCTCAGCATTTAATTATTGACTGTGGCGTGAGAGGATTT
AGGTAAGTTGATAATGCCGACTTTATGTAATTTATTTTTACTAGGCAATTACGGGCTGCA
TTACATCCTGGCAGCAAGGTATTGTGGGGCATCTTATTAAGCATAAAGCCAGTAAACACT
GATGAACAATTTTGCTGAACTAGGCATGCAATTTAGAAAGCAATAATACACAAATCCAAT
TTGGTACACAATGGATACCGCAGCACGTCAGCACATGTAACTATCACAGCCTGCAAATTA
AATTGGGACGGTCCTTTTTGCAAC------------GATTAAATATATTTTCCCCCTCAA
------------CTGACCACAAATATAAATATGTGTGTATGTGTTTGN------------
GGACATACACAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-626, gnl|bosTau2|chr28 (29160994-29160349)
               

               
               1-626, gnl|Hg17|chr10 (49858642-49859342)
               

               
               1-626, gnl|Mm7|chr14 (30392972-30392280)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-626, gnl|bosTau2|chr28 (29160994-29160349)
               

               
               1-626, gnl|Hg17|chr10 (49858642-49859342)
               

               
               1-626, gnl|Mm7|chr14 (30392972-30392280)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ill (0.175593)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ill (0.175593)

	1-626, gnl\|bosTau2\|chr28 (29160994-29160349)
	1-626, gnl\|Hg17\|chr10 (49858642-49859342)
	1-626, gnl\|Mm7\|chr14 (30392972-30392280)