Ss1.1-Lym1-jns33_B09.f.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCATTGCCATCAGTGACATCTCGGGCACCATTGTTTCCTGTGCGGGAGCCCACTTGTCCC TGTGGAATGTCAATGGACAACCCCTGGCCAGCATTACCACAGCCTGGGGCCCAGAAGGAG CCATAACCTGCTGCTGCGTGATGGAGGGGCCAGCATGGGACACAAACCATGTGATCGTCA CTGGGAGTCAAGATGGCATGGTCCGGATCTGGAAGACTGAGGATGTGAAGATGTCTGTTC CCAGGCAGGCAGCACCAGAGGAGCCCTGGGCTCTCCCTCCAAGCCCCAGAGGTCATAGGT GGGAGAAGAATCTTGCCCTTTGCAGAGAGCTGGATGTCAGCGTCGCTCTGACGGGGAAGC CCAACAAGACCAACTCTGCAGTGACAGCTCTGGCCGTGTCCAGAAACCAGACCAAACTCC TGGTTGGTGATGAAAAGGGAAGAATATTCTGCTGGTCAGCAGAGGGGTAGGAAGCACTGG CTGAGCAGCCGTGTGCCCTGAGGGGCAGCAGCAGACGGAAGGCACGTGGACGCTGACCTT GGCGCACAAAGGAAACCTGCAGAGACTTCCTTTGGCGAAGTCCCCAAGGAGGGGGCCGCT GGCTGCCAGAGCGCCACCTCCCGCGCCCCTGCAGGGCTATGGCCTCCGGCCTTGCCCTGT ACAAGGATGCACTTCTATAAAATGGATACGCATGGGCATGGAGGCTGCACAGCAAGCTGG AAGCCATGACCCTCAAGTGCCCATCATCACAAGAGATCACACATGACTCACCTTATTGCA CTGAAAAAAACATTGGGTCGCTTACTAATGGGAGGTACTGTATTGTTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCATTGCCATCAGTGACATCTCGGGCACCATTGTTTCCTGTGCGGGAGCCCACTTGTCCC TGTGGAATGTCAATGGACAACCCCTGGCCAGCATTACCACAGCCTGGGGCCCAGAAGGAG CCATAACCTGCTGCTGCGTGATGGAGGGGCCAGCATGGGACACAAACCATGTGATCGTCA CTGGGAGTCAAGATGGCATGGTCCGGATCTGGAAGACTGAGGATGTGAAGATGTCTGTTC CCAGGCAGGCAGCACCAGAGGAGCCCTGGGCTCTCCCTCCAAGCCCCAGAGGTCATAGGT GGGAGAAGAATCTTGCCCTTTGCAGAGAGCTGGATGTCAGCGTCGCTCTGACGGGGAAGC CCAACAAGACCAACTCTGCAGTGACAGCTCTGGCCGTGTCCAGAAACCAGACCAAACTCC TGGTTGGTGATGAAAAGGGAAGAATATTCTGCTGGTCAGCAGAGGGGTAGGAAGCACTGG CTGAGCAGCCGTGTGCCCTGAGGGGCAGCAGCAGACGGAAGGCACGTGGACGCTGACCTT GGCGCACAAAGGAAACCTGCAGAGACTTCCTTTGGCGAAGTCCCCAAGGAGGGGGCCGCT GGCTGCCAGAGCGCCACCTCCCGCGCCCCTGCAGGGCTATGGCCTCCGGCCTTGCCCTGT ACAAGGATGCACTTCTATAAAATGGATACGCATGGGCATGGAGGCTGCACAGCAAGCTGG AAGCCATGACCCTCAAGTGCCCATCATCACAAGAGATCACACATGACTCACCTTATTGCA CTGAAAAAAACATTGGGTCGCTTACTAATGGGAGGTACTGTATTGTTA |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 23-206, gnl|bosTau2|chr28 (29166013-29165830) | |
| 23-206, gnl|canFam2|chr28 (3891640-3891882) | |
| 23-206, gnl|danRer3|chr13 (32064789-32064601) | |
| 23-206, gnl|dasNov1|scaffold_1533 (38586-38381) | |
| 23-206, gnl|echTel1|scaffold_265736 (827-1053) | |
| 23-206, gnl|fr1|chrUn (16414364-16414576) | |
| 23-206, gnl|galGal2|chr6 (17715739-17715979) | |
| 23-206, gnl|hg17|chr10 (49854820-49855061) | |
| 23-206, gnl|Hg17|chr10 (49854847-49855030) | |
| 23-206, gnl|loxAfr1|scaffold_8980 (30913-30687) | |
| 23-206, gnl|mm7|chr14 (30397927-30397684) | |
| 23-206, gnl|Mm7|chr14 (30397897-30397714) | |
| 23-206, gnl|monDom2|scaffold_14 (20172517-20172732) | |
| 23-206, gnl|panTro1|chr8 (50185985-50186226) | |
| 23-206, gnl|rheMac2|chr9 (47640582-47640341) | |
| 23-206, gnl|rn3|chr16 (8491933-8491690) | |
| 23-206, gnl|tetNig1|chrUn_random (120480742-120480931) | |
| 23-206, gnl|xenTro1|scaffold_404 (163268-163430) | |
| 284-410, gnl|bosTau2|chr28 (29160278-29160151) | |
| 284-410, gnl|Hg17|chr10 (49859410-49859540) | |
| 284-410, gnl|Mm7|chr14 (30392211-30392078) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 23-206, gnl|bosTau2|chr28 (29166013-29165830) | |
| 23-206, gnl|canFam2|chr28 (3891640-3891882) | |
| 23-206, gnl|danRer3|chr13 (32064789-32064601) | |
| 23-206, gnl|dasNov1|scaffold_1533 (38586-38381) | |
| 23-206, gnl|echTel1|scaffold_265736 (827-1053) | |
| 23-206, gnl|fr1|chrUn (16414364-16414576) | |
| 23-206, gnl|galGal2|chr6 (17715739-17715979) | |
| 23-206, gnl|hg17|chr10 (49854820-49855061) | |
| 23-206, gnl|Hg17|chr10 (49854847-49855030) | |
| 23-206, gnl|loxAfr1|scaffold_8980 (30913-30687) | |
| 23-206, gnl|mm7|chr14 (30397927-30397684) | |
| 23-206, gnl|Mm7|chr14 (30397897-30397714) | |
| 23-206, gnl|monDom2|scaffold_14 (20172517-20172732) | |
| 23-206, gnl|panTro1|chr8 (50185985-50186226) | |
| 23-206, gnl|rheMac2|chr9 (47640582-47640341) | |
| 23-206, gnl|rn3|chr16 (8491933-8491690) | |
| 23-206, gnl|tetNig1|chrUn_random (120480742-120480931) | |
| 23-206, gnl|xenTro1|scaffold_404 (163268-163430) | |
| 284-410, gnl|bosTau2|chr28 (29160278-29160151) | |
| 284-410, gnl|Hg17|chr10 (49859410-49859540) | |
| 284-410, gnl|Mm7|chr14 (30392211-30392078) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cly (0.241284) | |
| cag (0.151194) | |
| med (0.116252) |