Ss1.1-Lym1-jns34_G06.f.5.5
|
CGTGTACAGAGGTTCCGGCGGGTGGCTCCTCTCCGGCTTGAAACCTTAGAGCGGCTTCTT
CTCGTCTGCGGCTTCTGACCTGCGAGCAAAGGAAAAAGCAACGAGATGACAGACCGCTAC
ACCATCCACAGCCAGTTAGAGCATCTGCAGTCCAAATACATCGGCACCGGCCACGCCGAC
ACCACCAAATGGGAGTGGCTGGTGAACCAGCACCGCGACTCCTATTGCTCCTACATGGGC
CACTTCGACCTTCTCAACTACTTCGCCATTGCCGAGAATGAGAGCAAAGCGCGAGTCCGC
TTCAACTTGATGGAGAAGATGCTGCAGCCTTGCGGCCCGCCCGCCGACAAACCGGAGGAG
AACTGAGACCTCACCGTCTCACCGCTAGGTCCTTACCCGGGGCGTTCCGTCCGACCTGCC
TTCCTGTGGAACAAAGAGTTGGGAGACCCGTCATAACCCCTGAGAAACTGAACAGTGGAG
AGATCCTAAAGTCTGCAGACGTTAGAGGAGATATGGCTGGAGTGAGATGGGATTAAGAGG
CTCGTTTTTGGCTAGTTGACTGTCTTCGTTGCTTTTTCTATAAAGTTTAGAAATGTTTCG
TCTGCAGACGTTAGAGGAGATATGGCTGGAGTGAGATGGGATTAAGAGGCTCGTTTTTGG
CTAGTTGACTGTCTTCGTTGCTTTTTCTATAAAGTTTAGAAATGTTTC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CGTGTACAGAGGTTCCGGCGGGTGGCTCCTCTCCGGCTTGAAACCTTAGAGCGGCTTCTT
CTCGTCTGCGGCTTCTGACCTGCGAGCAAAGGAAAAAGCAACGAGATGACAGACCGCTAC
ACCATCCACAGCCAGTTAGAGCATCTGCAGTCCAAATACATCGGCACCGGCCACGCCGAC
ACCACCAAATGGGAGTGGCTGGTGAACCAGCACCGCGACTCCTATTGCTCCTACATGGGC
CACTTCGACCTTCTCAACTACTTCGCCATTGCCGAGAATGAGAGCAAAGCGCGAGTCCGC
TTCAACTTGATGGAGAAGATGCTGCAGCCTTGCGGCCCGCCCGCCGACAAACCGGAGGAG
AACTGAGACCTCACCGTCTCACCGCTAGGTCCTTACCCGGGGCGTTCCGTCCGACCTGCC
TTCCTGTGGAACAAAGAGTTGGGAGACCCGTCATAACCCCTGAGAAACTGAACAGTGGAG
AGATCCTAAAGTCTGCAGACGTTAGAGGAGATATGGCTGGAGTGAGATGGGATTAAGAGG
CTCGTTTTTGGCTAGTTGACTGTCTTCGTTGCTTTTTCTATAAAGTTTAGAAATGTTTCG
TCTGCAGACGTTAGAGGAGATATGGCTGGAGTGAGATGGGATTAAGAGGCTCGTTTTTGG
CTAGTTGACTGTCTTCGTTGCTTTTTCTATAAAGTTTAGAAATGTTTC
|
|
gi|58760344|gb|AAW82082.1| |
Protein identifier
|
gi|58760344|gb|AAW82082.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
32-386, gnl|bosTau2|chr9 (50746519-50746165) |
|
32-386, gnl|Hg17|chr6 (144458412-144458047) |
|
32-386, gnl|Mm7|chr10 (12708877-12709241) |
| |
|
415-598, gnl|bosTau2|chr9 (50746014-50745848) |
|
415-598, gnl|canFam2|chr1 (38600782-38601179) |
|
415-598, gnl|echTel1|scaffold_256535 (15196-15568) |
|
415-598, gnl|hg17|chr6 (144457649-144458049) |
|
415-598, gnl|Hg17|chr6 (144457890-144457716) |
|
415-598, gnl|mm7|chr10 (12709606-12709245) |
|
415-598, gnl|Mm7|chr10 (12709346-12709537) |
|
415-598, gnl|monDom2|scaffold_0 (63432567-63432211) |
|
415-598, gnl|oryCun1|scaffold_212148 (89976-89588) |
|
415-598, gnl|panTro1|chr5 (147378139-147378539) |
|
415-598, gnl|rheMac2|chr4 (119587813-119587413) |
|
415-598, gnl|rn3|chr1 (7747426-7747059) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
32-386, gnl|bosTau2|chr9 (50746519-50746165) |
|
32-386, gnl|Hg17|chr6 (144458412-144458047) |
|
32-386, gnl|Mm7|chr10 (12708877-12709241) |
| |
|
415-598, gnl|bosTau2|chr9 (50746014-50745848) |
|
415-598, gnl|canFam2|chr1 (38600782-38601179) |
|
415-598, gnl|echTel1|scaffold_256535 (15196-15568) |
|
415-598, gnl|hg17|chr6 (144457649-144458049) |
|
415-598, gnl|Hg17|chr6 (144457890-144457716) |
|
415-598, gnl|mm7|chr10 (12709606-12709245) |
|
415-598, gnl|Mm7|chr10 (12709346-12709537) |
|
415-598, gnl|monDom2|scaffold_0 (63432567-63432211) |
|
415-598, gnl|oryCun1|scaffold_212148 (89976-89588) |
|
415-598, gnl|panTro1|chr5 (147378139-147378539) |
|
415-598, gnl|rheMac2|chr4 (119587813-119587413) |
|
415-598, gnl|rn3|chr1 (7747426-7747059) |
|
cki (2.80899) |
|
cut (1.52931) |
|
cje (1.48711) |
|
che (0.954198) |
|
pla (0.66836) |
|
sme (0.610874) |
|
cmu (0.55918) |
|
sin (0.524843) |
|
jej (0.494609) |
|
cag (0.453583) |
|
cst (0.420109) |
|
col (0.390016) |
|
fbs (0.350693) |
|
csp (0.322373) |
|
cte (0.29274) |
|
hyp (0.285673) |
|
pty (0.285429) |
|
cga (0.279096) |
|
ssp (0.271039) |
|
bla (0.248694) |
|
eep (0.245128) |
|
cbe (0.239234) |
|
hea (0.204499) |
|
sto (0.179824) |
|
fty (0.17584) |
|
ill (0.175593) |
|
ton (0.1755) |
|
mcp (0.170648) |
|
fhi (0.169578) |
|
nco (0.161734) |
|
csk (0.140746) |
|
ste (0.135208) |
|
cov (0.132153) |
|
kid (0.129735) |
|
thg (0.126791) |
|
ese (0.126502) |
|
cly (0.120642) |
|
eru (0.120048) |
|
pgl (0.118483) |
|
ebs (0.118301) |
|
ecc (0.115035) |
|
jca (0.11396) |
|
ldo (0.0970026) |
|
cki (2.80899) |
|
cut (1.52931) |
|
cje (1.48711) |
|
che (0.954198) |
|
pla (0.66836) |
|
sme (0.610874) |
|
cmu (0.55918) |
|
sin (0.524843) |
|
jej (0.494609) |
|
cag (0.453583) |
|
cst (0.420109) |
|
col (0.390016) |
|
fbs (0.350693) |
|
csp (0.322373) |
|
cte (0.29274) |
|
hyp (0.285673) |
|
pty (0.285429) |
|
cga (0.279096) |
|
ssp (0.271039) |
|
bla (0.248694) |
|
eep (0.245128) |
|
cbe (0.239234) |
|
hea (0.204499) |
|
sto (0.179824) |
|
fty (0.17584) |
|
ill (0.175593) |
|
ton (0.1755) |
|
mcp (0.170648) |
|
fhi (0.169578) |
|
nco (0.161734) |
|
csk (0.140746) |
|
ste (0.135208) |
|
cov (0.132153) |
|
kid (0.129735) |
|
thg (0.126791) |
|
ese (0.126502) |
|
cly (0.120642) |
|
eru (0.120048) |
|
pgl (0.118483) |
|
ebs (0.118301) |
|
ecc (0.115035) |
|
jca (0.11396) |
|
ldo (0.0970026) |
