Ss1.1-Lym1-jns38_D06.f.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTATATTAGAAATTGCAGCCATAGTATCATTGGGCCTTTCTTTTTACCAACCTCCAGAAG GGGATAATGCACTTTGTGGAGAAGTCTCTGTCGGGGAGGAAGAAGGTGAAGGTGAAACTG GTTGGATTGAAGGTGCTGCGATCCTGCTGTCGGTGGTGTGCGTGGTCTTGGTCACCGCCT TCAATGACTGGAGTAAGGAGAAGCAGTTCCGAGGCTTGCAGAGTCGAATTGAGCAGGAGC AGAAGTTCACGGTCATCAGGGGCGGGCAGGTCATTCAGATCCCTGTGGCCGACATTACTG TTGGCGATATCGCTCAGGTGAAGTACGGTGATCTTCTCCCGGCGGATGGAATCCTCATTC AAGGCAATGATCTTAAAATTGATGAGAGCTCGTTGACTGGGGAATCCGATCATGTTAAGA AGTCTTTAGATAAGGACCCCTTACTCTTATCAGGTACTCATGTAATGGAAGGCTCTGGAA GAATGGTAGTTACTGCAGTGGGTATAAATTCTCAAACTGGAATCATCTTTACCTTACTTG GAGCTGGAGGTGAAGAGGAAGAGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTATATTAGAAATTGCAGCCATAGTATCATTGGGCCTTTCTTTTTACCAACCTCCAGAAG GGGATAATGCACTTTGTGGAGAAGTCTCTGTCGGGGAGGAAGAAGGTGAAGGTGAAACTG GTTGGATTGAAGGTGCTGCGATCCTGCTGTCGGTGGTGTGCGTGGTCTTGGTCACCGCCT TCAATGACTGGAGTAAGGAGAAGCAGTTCCGAGGCTTGCAGAGTCGAATTGAGCAGGAGC AGAAGTTCACGGTCATCAGGGGCGGGCAGGTCATTCAGATCCCTGTGGCCGACATTACTG TTGGCGATATCGCTCAGGTGAAGTACGGTGATCTTCTCCCGGCGGATGGAATCCTCATTC AAGGCAATGATCTTAAAATTGATGAGAGCTCGTTGACTGGGGAATCCGATCATGTTAAGA AGTCTTTAGATAAGGACCCCTTACTCTTATCAGGTACTCATGTAATGGAAGGCTCTGGAA GAATGGTAGTTACTGCAGTGGGTATAAATTCTCAAACTGGAATCATCTTTACCTTACTTG GAGCTGGAGGTGAAGAGGAAGAGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 96-331, gnl|bosTau2|chr16 (2854562-2854797) | |
| 96-331, gnl|canFam2|chr38 (3380287-3380552) | |
| 96-331, gnl|danRer3|chr11 (21174677-21174939) | |
| 96-331, gnl|dasNov1|scaffold_137946 (3344-3604) | |
| 96-331, gnl|echTel1|scaffold_272922 (10267-10003) | |
| 96-331, gnl|fr1|chrUn (75935373-75935108) | |
| 96-331, gnl|galGal2|chr26 (3689162-3689422) | |
| 96-331, gnl|hg17|chr1 (200400248-200400513) | |
| 96-331, gnl|Hg17|chr1 (200400271-200400506) | |
| 96-331, gnl|loxAfr1|scaffold_3228 (67293-67036) | |
| 96-331, gnl|mm7|chr1 (133629204-133628939) | |
| 96-331, gnl|Mm7|chr1 (133629179-133628944) | |
| 96-331, gnl|monDom2|scaffold_13 (3936751-3937016) | |
| 96-331, gnl|oryCun1|scaffold_186382 (12149-11884) | |
| 96-331, gnl|panTro1|chr1 (183333903-183334168) | |
| 96-331, gnl|rheMac2|chr1 (166723277-166723012) | |
| 96-331, gnl|rn3|chr13 (46697654-46697389) | |
| 96-331, gnl|tetNig1|chrUn_random (12126261-12126001) | |
| 96-331, gnl|xenTro1|scaffold_19 (759836-759579) | |
| 440-564, gnl|bosTau2|chr16 (2855835-2855961) | |
| 440-564, gnl|Hg17|chr1 (200401570-200401696) | |
| 440-564, gnl|Mm7|chr1 (133627918-133627787) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 96-331, gnl|bosTau2|chr16 (2854562-2854797) | |
| 96-331, gnl|canFam2|chr38 (3380287-3380552) | |
| 96-331, gnl|danRer3|chr11 (21174677-21174939) | |
| 96-331, gnl|dasNov1|scaffold_137946 (3344-3604) | |
| 96-331, gnl|echTel1|scaffold_272922 (10267-10003) | |
| 96-331, gnl|fr1|chrUn (75935373-75935108) | |
| 96-331, gnl|galGal2|chr26 (3689162-3689422) | |
| 96-331, gnl|hg17|chr1 (200400248-200400513) | |
| 96-331, gnl|Hg17|chr1 (200400271-200400506) | |
| 96-331, gnl|loxAfr1|scaffold_3228 (67293-67036) | |
| 96-331, gnl|mm7|chr1 (133629204-133628939) | |
| 96-331, gnl|Mm7|chr1 (133629179-133628944) | |
| 96-331, gnl|monDom2|scaffold_13 (3936751-3937016) | |
| 96-331, gnl|oryCun1|scaffold_186382 (12149-11884) | |
| 96-331, gnl|panTro1|chr1 (183333903-183334168) | |
| 96-331, gnl|rheMac2|chr1 (166723277-166723012) | |
| 96-331, gnl|rn3|chr13 (46697654-46697389) | |
| 96-331, gnl|tetNig1|chrUn_random (12126261-12126001) | |
| 96-331, gnl|xenTro1|scaffold_19 (759836-759579) | |
| 440-564, gnl|bosTau2|chr16 (2855835-2855961) | |
| 440-564, gnl|Hg17|chr1 (200401570-200401696) | |
| 440-564, gnl|Mm7|chr1 (133627918-133627787) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cki (0.495704) | |
| cje (0.165235) | |
| eep (0.122564) |