Non-Coding RNA Search

Ss1.1-Lym1-jns49_F03.f.5

Sequence:


               
               TTTGGCATTGCCACAGTTGTGTCACAGGTTGCAGCTGTGGCTTAGGTTCGATCCCTGGCC
TAGGAATTTCCATATGCTGTGAGTATGGCAAAAAAAAAAAAAAAAAAAGAGTGCCTGGCA
AAAAAGATCAAGTAGCGCTAGAATTTCCTACCCTATTGTCCAAGCTGCTTTCTCCCAGAA
AGGGGCTAGCAATGGTGACATGATTTAGCTGGTGCCATGCCCGGAGATGATCCACTGAGC
CCTTATGCCCCAGCACTGGCACTGACCTCTGTTAGCCACCTCTCCATCCATATTCATCTC
TGCCAGTGCTCACAATAACACCTGGTGACATGCCTAAATATGGGTGCTCACTCCTTGATA
GCTAAACCATGGAGTCCCAGTAAACTATGCCCAACCCCCGCGTGCCCCTTTCTTGTCCTA
CTTGTTTCTGTCTCAGTAGGACATTGCAAAAACAGAACACTCTAAGGCTCCAGATTCCTG
CGTGGATGAGGGTCCTGCAAGCAGTGGGGAGGAGAGGCCTAGGAGAACCCCGCTGGGCTC
TGGAATCCTCTCCCTTGTACTAATAAAGCTATTTCATCCTCCCAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTGGCATTGCCACAGTTGTGTCACAGGTTGCAGCTGTGGCTTAGGTTCGATCCCTGGCC
TAGGAATTTCCATATGCTGTGAGTATGGCAAAAAAAAAAAAAAAAAAAGAGTGCCTGGCA
AAAAAGATCAAGTAGCGCTAGAATTTCCTACCCTATTGTCCAAGCTGCTTTCTCCCAGAA
AGGGGCTAGCAATGGTGACATGATTTAGCTGGTGCCATGCCCGGAGATGATCCACTGAGC
CCTTATGCCCCAGCACTGGCACTGACCTCTGTTAGCCACCTCTCCATCCATATTCATCTC
TGCCAGTGCTCACAATAACACCTGGTGACATGCCTAAATATGGGTGCTCACTCCTTGATA
GCTAAACCATGGAGTCCCAGTAAACTATGCCCAACCCCCGCGTGCCCCTTTCTTGTCCTA
CTTGTTTCTGTCTCAGTAGGACATTGCAAAAACAGAACACTCTAAGGCTCCAGATTCCTG
CGTGGATGAGGGTCCTGCAAGCAGTGGGGAGGAGAGGCCTAGGAGAACCCCGCTGGGCTC
TGGAATCCTCTCCCTTGTACTAATAAAGCTATTTCATCCTCCCAAAAAAAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               107-326, gnl|bosTau2|chr7 (9522665-9522446)
               

               
               107-326, gnl|Hg17|chr19 (10257608-10257843)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               107-326, gnl|bosTau2|chr7 (9522665-9522446)
               

               
               107-326, gnl|Hg17|chr19 (10257608-10257843)

Expressed library(ies): 7 entry(ies)

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Expressed library(ies): 7 entry(ies)

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               nlu (0.191681)
               

               
               csp (0.161186)
               

               
               cag (0.151194)
               

               
               cov (0.132153)
               

               
               ese (0.126502)
               

               
               eep (0.122564)
               

               
               clu (0.119646)

Expressed library(ies): 7 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nlu (0.191681)
               

               
               csp (0.161186)
               

               
               cag (0.151194)
               

               
               cov (0.132153)
               

               
               ese (0.126502)
               

               
               eep (0.122564)
               

               
               clu (0.119646)

	107-326, gnl\|bosTau2\|chr7 (9522665-9522446)
	107-326, gnl\|Hg17\|chr19 (10257608-10257843)

	nlu (0.191681)
	csp (0.161186)
	cag (0.151194)
	cov (0.132153)
	ese (0.126502)
	eep (0.122564)
	clu (0.119646)