Non-Coding RNA Search

Ss1.1-Lym1-jns54_A10.f.5

Sequence:


               
               TTTTTTTTTTAT------------------------------------------------
------------------------------------ATCTGTGACCTATGCTGTGGCTTA
TGGCAATGCCAGATCCTTAACCCACCTCCAGGGGTGTCATCTCCCTGGAATGGTGACAAG
CTGCTGTCCAGGCTCCAGGAAGCCCAGGAATGCTCTGGTCACCCGAGGACCCTTCCTGAG
CCTGCCCTGAGACCAGAAGGGAGCACAACTGTTCCATGACCTGTGTCACCTAAGTCTGTC
TGAAGACTTGGCAGGTCTGATCCTGCCACTGCTCCTGCAGTCTCGGGATTCGCTGCCGGT
TCCCTGTGACTGTGTACCGCTCGTCTGAGGAAGGTTGAAGGTGCTCTTCTCGTGAGACCA
CCTGCGCTTGTTTCTGCAGGGCACTGGGTTACCTCCGTCCTGGGACCCATCAGGGATCAA
ACCTGCGTCACAGCAGTGGCAGGGAGACCTTTAACCCGCTAAGCCACCAAAGAACTCCCC
ATCTTACTTCTTAGAGCTTTGCGACTCTACCACCTGAAGCTTCTGGAAGATTTCAGGAGG
CAAAAATGGAGACAGCTTCCCCCCCTCGTCTGAGTACACCCGGCGGTGTCGGCTGGTAGG
AGAGGGGACAGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTAT------------------------------------------------
------------------------------------ATCTGTGACCTATGCTGTGGCTTA
TGGCAATGCCAGATCCTTAACCCACCTCCAGGGGTGTCATCTCCCTGGAATGGTGACAAG
CTGCTGTCCAGGCTCCAGGAAGCCCAGGAATGCTCTGGTCACCCGAGGACCCTTCCTGAG
CCTGCCCTGAGACCAGAAGGGAGCACAACTGTTCCATGACCTGTGTCACCTAAGTCTGTC
TGAAGACTTGGCAGGTCTGATCCTGCCACTGCTCCTGCAGTCTCGGGATTCGCTGCCGGT
TCCCTGTGACTGTGTACCGCTCGTCTGAGGAAGGTTGAAGGTGCTCTTCTCGTGAGACCA
CCTGCGCTTGTTTCTGCAGGGCACTGGGTTACCTCCGTCCTGGGACCCATCAGGGATCAA
ACCTGCGTCACAGCAGTGGCAGGGAGACCTTTAACCCGCTAAGCCACCAAAGAACTCCCC
ATCTTACTTCTTAGAGCTTTGCGACTCTACCACCTGAAGCTTCTGGAAGATTTCAGGAGG
CAAAAATGGAGACAGCTTCCCCCCCTCGTCTGAGTACACCCGGCGGTGTCGGCTGGTAGG
AGAGGGGACAGG

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               174-588, gnl|bosTau2|chr18 (15479149-15479560)
               

               
               174-588, gnl|Mm7|chr8 (121891490-121891872)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               174-588, gnl|bosTau2|chr18 (15479149-15479560)
               

               
               174-588, gnl|Mm7|chr8 (121891490-121891872)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	174-588, gnl\|bosTau2\|chr18 (15479149-15479560)
	174-588, gnl\|Mm7\|chr8 (121891490-121891872)