Non-Coding RNA Search

Ss1.1-Lym1-jns63_A11.f.5

Sequence:


               
               CTTATAAATTTATTTTCATACCAAAAAAAAAATAACATTCAAAGGCAATGTTTTTATTGT
ATAATATAAAATGACTTCCCTAAATTAAAAATGGAATTTTTTTGCTGTAAGCCATGGTTA
TCTTTTCCATTAAAAATTTTTTACAATTTGCAGCACTTGTAGAAAAAAAAACACCTGTTC
AATAATTATATAAATACTCCTGACAGATCCCAGTAGCCCATTATGTATCCTTTTGGCAAT
GTCAGCTTTCTAAAGTCAATTAGCTTCTAAATTTGAAAGGCACCTGGTGGCCAGCATTCT
GCTTAGTATTCAAGGCATCCTTTTTAATTTTTTTGCACAGACTTGACAAGTCTGAAAAAT
CTATTAAGTTAAGGAGAATGAAGAAATATAACACAGTTCATATTAGCAAACATTTTTTTT
TTCCTGTAGCTGCAAGTTTTTCCCAGGGGATTTACAAAGTGCACCAGTTAAATACGTCTG
TACATTTAAAACATTAAATATGTCAATAGCAAGACATTTTTTAAATATTTTGAATCAAAT
ACTATAGCACAAATATAATTTACAATACTTTGCACAGAAAACATTACATCTGAAATATAA
CTTTAGATATTCTATAAAAATACATATTATTTTTCTCTCCTCATTAGAAAAAGTATTTAT
TTGCAGGTTCCAGCATGATGTAACAACTCAAAAGAATTTAACCCTTCAGATGGTCATCAG
TCTGCAATTAGATGACACCTTCTCCACTTCAGCCACATGGGGGTGGCACATCGCCACAGG
CTAGAGCCAGAGAATTAACCCCTCCCATAGGCCCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTATAAATTTATTTTCATACCAAAAAAAAAATAACATTCAAAGGCAATGTTTTTATTGT
ATAATATAAAATGACTTCCCTAAATTAAAAATGGAATTTTTTTGCTGTAAGCCATGGTTA
TCTTTTCCATTAAAAATTTTTTACAATTTGCAGCACTTGTAGAAAAAAAAACACCTGTTC
AATAATTATATAAATACTCCTGACAGATCCCAGTAGCCCATTATGTATCCTTTTGGCAAT
GTCAGCTTTCTAAAGTCAATTAGCTTCTAAATTTGAAAGGCACCTGGTGGCCAGCATTCT
GCTTAGTATTCAAGGCATCCTTTTTAATTTTTTTGCACAGACTTGACAAGTCTGAAAAAT
CTATTAAGTTAAGGAGAATGAAGAAATATAACACAGTTCATATTAGCAAACATTTTTTTT
TTCCTGTAGCTGCAAGTTTTTCCCAGGGGATTTACAAAGTGCACCAGTTAAATACGTCTG
TACATTTAAAACATTAAATATGTCAATAGCAAGACATTTTTTAAATATTTTGAATCAAAT
ACTATAGCACAAATATAATTTACAATACTTTGCACAGAAAACATTACATCTGAAATATAA
CTTTAGATATTCTATAAAAATACATATTATTTTTCTCTCCTCATTAGAAAAAGTATTTAT
TTGCAGGTTCCAGCATGATGTAACAACTCAAAAGAATTTAACCCTTCAGATGGTCATCAG
TCTGCAATTAGATGACACCTTCTCCACTTCAGCCACATGGGGGTGGCACATCGCCACAGG
CTAGAGCCAGAGAATTAACCCCTCCCATAGGCCCAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-816, gnl|bosTau2|chr12 (4153441-4152635)
               

               
               3-816, gnl|Hg17|chr13 (42080138-42079340)
               

               
               3-816, gnl|Mm7|chr14 (72957808-72958647)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-816, gnl|bosTau2|chr12 (4153441-4152635)
               

               
               3-816, gnl|Hg17|chr13 (42080138-42079340)
               

               
               3-816, gnl|Mm7|chr14 (72957808-72958647)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               med (0.116252)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               med (0.116252)

	3-816, gnl\|bosTau2\|chr12 (4153441-4152635)
	3-816, gnl\|Hg17\|chr13 (42080138-42079340)
	3-816, gnl\|Mm7\|chr14 (72957808-72958647)