Ss1.1-Lym1-jns75_F08.f.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTCATGGATTTGAGATCTTATGCTCCAAATGTAGCCCACATTTTTCTGACTCCAAGAAAT CTCTTGTTACTACTTCACCGCTCTGGGCTGGCTTCCTTGAAAGCCTAAAAAAGAATGATT ACTTTAAGGGATTGATAGAAGGTTCTGCTCAGTACCAGGAAAGGCTAGAAATGGCGAAGA ACTACTTCCAGCTCTCCATAAACCAGCCAGAAAGCTCTCTTGCTGTGAGTCCAGGTGAAG AAATCTTAACATTATTACACACAGTATCATATGATATGGAAGAGCTTAAGAAAGAAGCAG CTAATCTTCCCCCAGAAGATGATGACCAGTGGTTAGATCTCTCACCAGATCAGCTGGACC AGCTGCTGCAGGAAGCTGCTGGCAAAAAAGAACCAGAGCCTGTTTCCAAGGGGCGAGAGG AGAACTATGACTTAACTCAGGTCTCAGAGAGCATGAAAGCTTTCATATCCAAAGTCTCAA GCCACAAAGGAGCAGAGCTGCCTCGAGAACCTTCTGAGGCTCCAATCACCTTTGATGCAG ATTTGTTTCTTAATTATTTTGATAAGATTTTAGGGTCAAAGCCCCATGAGTCAGACTCTG ATGATCCAGACGAAGAAGACTCTGAATGTTTAGATAGTGATGATGACTTGGAAATCGAAA CACAGGAGCCTGGGGAGGAAGCATCTGTAAAAGGAACTCTTGATGATCTCAAGTCATATA TGGCCCAGATGGACCAGGAACTGGCACATACCAGCATTGGCAAAAGTTTTACCACCCAGA AGCAAATGGAACCTCTATCCCGGACTACCAGTAACAATTCAGACGAGGAAGATTCTGGTG CAGGAGGATCTGTTATGACACCAGTGGATGTAGACCTGAACCTCGTTTCAAATATATTGG AGTCCTACAGTTCCCAAGCTGGACTCGCAGGCCCTGCCTCCAACCTTTTACAGAGCATGG GAGTTCAGCTGCCTGACAATGCTGATCACAGACCCACAAGTAAGCCAACGAAAGATTAGC CACCAAACAGCCTCTCTTTTATCTTCTTAAATAAATACTGAGTCTGAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTCATGGATTTGAGATCTTATGCTCCAAATGTAGCCCACATTTTTCTGACTCCAAGAAAT CTCTTGTTACTACTTCACCGCTCTGGGCTGGCTTCCTTGAAAGCCTAAAAAAGAATGATT ACTTTAAGGGATTGATAGAAGGTTCTGCTCAGTACCAGGAAAGGCTAGAAATGGCGAAGA ACTACTTCCAGCTCTCCATAAACCAGCCAGAAAGCTCTCTTGCTGTGAGTCCAGGTGAAG AAATCTTAACATTATTACACACAGTATCATATGATATGGAAGAGCTTAAGAAAGAAGCAG CTAATCTTCCCCCAGAAGATGATGACCAGTGGTTAGATCTCTCACCAGATCAGCTGGACC AGCTGCTGCAGGAAGCTGCTGGCAAAAAAGAACCAGAGCCTGTTTCCAAGGGGCGAGAGG AGAACTATGACTTAACTCAGGTCTCAGAGAGCATGAAAGCTTTCATATCCAAAGTCTCAA GCCACAAAGGAGCAGAGCTGCCTCGAGAACCTTCTGAGGCTCCAATCACCTTTGATGCAG ATTTGTTTCTTAATTATTTTGATAAGATTTTAGGGTCAAAGCCCCATGAGTCAGACTCTG ATGATCCAGACGAAGAAGACTCTGAATGTTTAGATAGTGATGATGACTTGGAAATCGAAA CACAGGAGCCTGGGGAGGAAGCATCTGTAAAAGGAACTCTTGATGATCTCAAGTCATATA TGGCCCAGATGGACCAGGAACTGGCACATACCAGCATTGGCAAAAGTTTTACCACCCAGA AGCAAATGGAACCTCTATCCCGGACTACCAGTAACAATTCAGACGAGGAAGATTCTGGTG CAGGAGGATCTGTTATGACACCAGTGGATGTAGACCTGAACCTCGTTTCAAATATATTGG AGTCCTACAGTTCCCAAGCTGGACTCGCAGGCCCTGCCTCCAACCTTTTACAGAGCATGG GAGTTCAGCTGCCTGACAATGCTGATCACAGACCCACAAGTAAGCCAACGAAAGATTAGC CACCAAACAGCCTCTCTTTTATCTTCTTAAATAAATACTGAGTCTGAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 1-129, gnl|bosTau2|chr28 (22448882-22448757) | |
| 1-129, gnl|canFam2|chr4 (26940258-26940427) | |
| 1-129, gnl|dasNov1|scaffold_60307 (3327-3496) | |
| 1-129, gnl|echTel1|scaffold_304049 (8599-8769) | |
| 1-129, gnl|fr1|chrUn (57053090-57052932) | |
| 1-129, gnl|galGal2|chr6 (4628084-4628248) | |
| 1-129, gnl|hg17|chr10 (74578014-74578185) | |
| 1-129, gnl|Hg17|chr10 (74578167-74578039) | |
| 1-129, gnl|loxAfr1|scaffold_9714 (44147-44313) | |
| 1-129, gnl|mm7|chr14 (17989861-17990031) | |
| 1-129, gnl|Mm7|chr14 (17990013-17989885) | |
| 1-129, gnl|monDom2|scaffold_14 (1242958-1243119) | |
| 1-129, gnl|panTro1|chr8_random (40038814-40038985) | |
| 1-129, gnl|rheMac2|chr9 (63801820-63801649) | |
| 1-129, gnl|rn3|chr15 (4211483-4211313) | |
| 1-129, gnl|tetNig1|chrUn_random (9702137-9702001) | |
| 1-129, gnl|xenTro1|scaffold_228 (1201175-1201037) | |
| 321-516, gnl|bosTau2|chr28 (22438446-22438252) | |
| 321-516, gnl|Hg17|chr10 (74569260-74569063) | |
| 321-516, gnl|Mm7|chr14 (17985347-17985151) | |
| 768-1068, gnl|bosTau2|chr28 (22433367-22433067) | |
| 768-1068, gnl|Hg17|chr10 (74564596-74564296) | |
| 768-1068, gnl|Mm7|chr14 (17977521-17977251) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-129, gnl|bosTau2|chr28 (22448882-22448757) | |
| 1-129, gnl|canFam2|chr4 (26940258-26940427) | |
| 1-129, gnl|dasNov1|scaffold_60307 (3327-3496) | |
| 1-129, gnl|echTel1|scaffold_304049 (8599-8769) | |
| 1-129, gnl|fr1|chrUn (57053090-57052932) | |
| 1-129, gnl|galGal2|chr6 (4628084-4628248) | |
| 1-129, gnl|hg17|chr10 (74578014-74578185) | |
| 1-129, gnl|Hg17|chr10 (74578167-74578039) | |
| 1-129, gnl|loxAfr1|scaffold_9714 (44147-44313) | |
| 1-129, gnl|mm7|chr14 (17989861-17990031) | |
| 1-129, gnl|Mm7|chr14 (17990013-17989885) | |
| 1-129, gnl|monDom2|scaffold_14 (1242958-1243119) | |
| 1-129, gnl|panTro1|chr8_random (40038814-40038985) | |
| 1-129, gnl|rheMac2|chr9 (63801820-63801649) | |
| 1-129, gnl|rn3|chr15 (4211483-4211313) | |
| 1-129, gnl|tetNig1|chrUn_random (9702137-9702001) | |
| 1-129, gnl|xenTro1|scaffold_228 (1201175-1201037) | |
| 321-516, gnl|bosTau2|chr28 (22438446-22438252) | |
| 321-516, gnl|Hg17|chr10 (74569260-74569063) | |
| 321-516, gnl|Mm7|chr14 (17985347-17985151) | |
| 768-1068, gnl|bosTau2|chr28 (22433367-22433067) | |
| 768-1068, gnl|Hg17|chr10 (74564596-74564296) | |
| 768-1068, gnl|Mm7|chr14 (17977521-17977251) |
| Expressed library(ies): 6 entry(ies) | More info |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
| ste (0.270416) | |
| nms (0.213858) | |
| hea (0.204499) | |
| spl (0.143184) | |
| jej (0.0989218) | |
| eje (0.0988338) |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ste (0.270416) | |
| nms (0.213858) | |
| hea (0.204499) | |
| spl (0.143184) | |
| jej (0.0989218) | |
| eje (0.0988338) |