Non-Coding RNA Search

Ss1.1-Lym1-jns86_D06.f.5

Sequence:


               
               ATGCTGACCAAGACATGGCGCTCCAGCGCCACCGGCGATGACCGGTTTGCTGACCGGCTG
CTGAAGGACTTCACGGACTTCTGCATCAACCGTGACAACCGGCTGGTGGCCTTCTGGACA
AGCTGCCTGGAGAAGATGCATGCCAGTGCTCCATGACGTTGAGGTCGGGAACAGGCTTGC
TGCTGCCCCTCAGTGGGGTCAGTCAAGCTCTGGGCAGTGAGGGTGCCTTTGCTGCGTTGC
TGCAGCTCGTCCCCTGCCATTGCCCACCCATGACTGGAGAGAGCCACCAGCACGCCGGGA
GGGCGACGGTACTGGGGAAGGGGGCGGGGAGCCCCCATGAGTGTCCTCGAGACGGGGTGG
CTCCTAGGAGCATCCCTTCCTCCACCGACTGTTCATCCGTCTGTGGGCTCTTCAGAGTGG
AATCTGCCACTTCTCCCCGACAAGAAGCACGTACAGGATGTATGATAATTTTGTGAAATA
ATGTACCATAGGCTCACACAGACTGTATATACCTGTACAGATCAGAAGCAGGAATAAAGT
GCCACGTGCCGCTTCTCTGTCCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGCTGACCAAGACATGGCGCTCCAGCGCCACCGGCGATGACCGGTTTGCTGACCGGCTG
CTGAAGGACTTCACGGACTTCTGCATCAACCGTGACAACCGGCTGGTGGCCTTCTGGACA
AGCTGCCTGGAGAAGATGCATGCCAGTGCTCCATGACGTTGAGGTCGGGAACAGGCTTGC
TGCTGCCCCTCAGTGGGGTCAGTCAAGCTCTGGGCAGTGAGGGTGCCTTTGCTGCGTTGC
TGCAGCTCGTCCCCTGCCATTGCCCACCCATGACTGGAGAGAGCCACCAGCACGCCGGGA
GGGCGACGGTACTGGGGAAGGGGGCGGGGAGCCCCCATGAGTGTCCTCGAGACGGGGTGG
CTCCTAGGAGCATCCCTTCCTCCACCGACTGTTCATCCGTCTGTGGGCTCTTCAGAGTGG
AATCTGCCACTTCTCCCCGACAAGAAGCACGTACAGGATGTATGATAATTTTGTGAAATA
ATGTACCATAGGCTCACACAGACTGTATATACCTGTACAGATCAGAAGCAGGAATAAAGT
GCCACGTGCCGCTTCTCTGTCCCC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-193, gnl|bosTau2|chr17 (43352033-43352226)
               

               
               1-193, gnl|Hg17|chr22 (30626882-30627087)
               

               
               1-193, gnl|Mm7|chr5 (32053822-32054036)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-193, gnl|bosTau2|chr17 (43352033-43352226)
               

               
               1-193, gnl|Hg17|chr22 (30626882-30627087)
               

               
               1-193, gnl|Mm7|chr5 (32053822-32054036)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fbs (0.175346)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.175346)

	1-193, gnl\|bosTau2\|chr17 (43352033-43352226)
	1-193, gnl\|Hg17\|chr22 (30626882-30627087)
	1-193, gnl\|Mm7\|chr5 (32053822-32054036)