Non-Coding RNA Search

Ss1.1-Lym1-jns92_B02.f.5

Sequence:


               
               TCAGGTTCACACGGGAGGCGGCACGGGACTGTGAGGTGCTGGGGCAGCGCATCCCCGCGG
GCACAGTGCTGGAGGTGGCCGTGGGCGCCCTGCACCATGACCCCAAGCACTGGCCACACC
CCGAGACCTTCGACCCTGAGAGGTTCACGGCTGAGGCCCAGCGGCTCCAGCAGCCCTTCA
CGTACCTGCCGTTTGGGGCGGGCCCCCGGAGCTGTCTCGGGGTGCAGCTGGGGCTCCTGG
AGATCAAGCTGACACTGCTCCACATTCTGCGCAAGTTCCGCTTTGAAGCCTGTCCTGAGA
CTCAGGTGCCACTGCAGCTAGAATCCAAGTCGGCCCTGAGTCCAAAAAATGGCGTCTACA
TCAGGATTGTCCCTCGCTGACCCAGTCAAGTGTTTCAACACCAACCCTCCCTCGAGAAAA
CCCTCCTGAGGAAATTTGGATATTTGGAAAAATATCACCAAAGTGACTGAAAGGATGCCT
GGCATGCATAAAAGTAGAAAAGAAGCTATTTCCGTAATATTCCTACATGCTTAATAACCC
TTCCCTGCCCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCAGGTTCACACGGGAGGCGGCACGGGACTGTGAGGTGCTGGGGCAGCGCATCCCCGCGG
GCACAGTGCTGGAGGTGGCCGTGGGCGCCCTGCACCATGACCCCAAGCACTGGCCACACC
CCGAGACCTTCGACCCTGAGAGGTTCACGGCTGAGGCCCAGCGGCTCCAGCAGCCCTTCA
CGTACCTGCCGTTTGGGGCGGGCCCCCGGAGCTGTCTCGGGGTGCAGCTGGGGCTCCTGG
AGATCAAGCTGACACTGCTCCACATTCTGCGCAAGTTCCGCTTTGAAGCCTGTCCTGAGA
CTCAGGTGCCACTGCAGCTAGAATCCAAGTCGGCCCTGAGTCCAAAAAATGGCGTCTACA
TCAGGATTGTCCCTCGCTGACCCAGTCAAGTGTTTCAACACCAACCCTCCCTCGAGAAAA
CCCTCCTGAGGAAATTTGGATATTTGGAAAAATATCACCAAAGTGACTGAAAGGATGCCT
GGCATGCATAAAAGTAGAAAAGAAGCTATTTCCGTAATATTCCTACATGCTTAATAACCC
TTCCCTGCCCTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               112-308, gnl|bosTau2|chr4 (57121143-57121337)
               

               
               112-308, gnl|Hg17|chr7 (139170626-139170820)
               

               
               112-308, gnl|Mm7|chr6 (39014587-39014783)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               112-308, gnl|bosTau2|chr4 (57121143-57121337)
               

               
               112-308, gnl|Hg17|chr7 (139170626-139170820)
               

               
               112-308, gnl|Mm7|chr6 (39014587-39014783)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eje (0.0988338)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eje (0.0988338)

	112-308, gnl\|bosTau2\|chr4 (57121143-57121337)
	112-308, gnl\|Hg17\|chr7 (139170626-139170820)
	112-308, gnl\|Mm7\|chr6 (39014587-39014783)