Non-Coding RNA Search

Ss1.1-Lym1-jns97_C07.f.5

Sequence:


               
               CTTTTTCAGGCC------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------CTGCCACAACAGGAACTCCTGATAACTATCTTTAGT
GTTGTGTTTGGATTGCTTTTTCTTATTTGTGTGTGTATCTATTGTAGATTTTTGGTTTGG
GGTTACCATGAGGTGATTTGTGTGTGTGTATATTGTAGTTTTTGGTTTGATAGAGAAATC
TATATATGTCAAGATTGTTTTTAGTTGTTGGTCTCTTAAGTGCAAGTGCATCTCCAGTAT
CCTGCATTTGTACCCACTTCTTCTCACAATTTCTGATTTTGGTAGCATATTTGTGTGTGG
ATGACTTCCTACCTTTACTATATGTATGCCTTTACCCCTGTGAACCTTGTCATTTATAAT
GTTTTTGTTTCTAGTTGTGGCCTTTCACCTAGAGAAGTTCCTTTAGTATTTGTTGTAAAC
CTGGTTTAATGGTGCTGAATTCTCTTAGCTTTTGCTTGTCTGTAAAGCTTTTGATTTCTC
TTTCAGATCTGAATGAGAGTCATACTGTGTAATCTTGGTTGGAGGTTTTTTCCTTTCATC
ACTTTAAGAAGATCATGCCACTCCTTTTAGGCCTGCAGTTTGTGCTAAAAAAAAATCAGC
TGATAACCTTATCTGGGTTCCCTGTATGTTATTTGTTTTTTTTACCCTACCTGCTTTCAA
ATATTTTCTCTTTACTTTTGGTCAATTTGATTAATATGTACCCTGGGTATTGCCCTTTTG
GGTTTGTTTTATGTGGTACTCATTATGCTTCCTGGATTTGAGGGAGTGATTCCTTTCTCA
TGTTAGGAATGTTTTTGGCTATTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTTTTCAGGCC------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------CTGCCACAACAGGAACTCCTGATAACTATCTTTAGT
GTTGTGTTTGGATTGCTTTTTCTTATTTGTGTGTGTATCTATTGTAGATTTTTGGTTTGG
GGTTACCATGAGGTGATTTGTGTGTGTGTATATTGTAGTTTTTGGTTTGATAGAGAAATC
TATATATGTCAAGATTGTTTTTAGTTGTTGGTCTCTTAAGTGCAAGTGCATCTCCAGTAT
CCTGCATTTGTACCCACTTCTTCTCACAATTTCTGATTTTGGTAGCATATTTGTGTGTGG
ATGACTTCCTACCTTTACTATATGTATGCCTTTACCCCTGTGAACCTTGTCATTTATAAT
GTTTTTGTTTCTAGTTGTGGCCTTTCACCTAGAGAAGTTCCTTTAGTATTTGTTGTAAAC
CTGGTTTAATGGTGCTGAATTCTCTTAGCTTTTGCTTGTCTGTAAAGCTTTTGATTTCTC
TTTCAGATCTGAATGAGAGTCATACTGTGTAATCTTGGTTGGAGGTTTTTTCCTTTCATC
ACTTTAAGAAGATCATGCCACTCCTTTTAGGCCTGCAGTTTGTGCTAAAAAAAAATCAGC
TGATAACCTTATCTGGGTTCCCTGTATGTTATTTGTTTTTTTTACCCTACCTGCTTTCAA
ATATTTTCTCTTTACTTTTGGTCAATTTGATTAATATGTACCCTGGGTATTGCCCTTTTG
GGTTTGTTTTATGTGGTACTCATTATGCTTCCTGGATTTGAGGGAGTGATTCCTTTCTCA
TGTTAGGAATGTTTTTGGCTATTG

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               37-791, gnl|bosTau2|chr1 (72137276-72136519)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               37-791, gnl|bosTau2|chr1 (72137276-72136519)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cbr (0.127975)
               

               
               cty (0.10408)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbr (0.127975)
               

               
               cty (0.10408)