Ss1.1-Lym2-sn06_F02.f.5.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGAGGAGACACCGCCGCAGTTGCCGCCACCTCCGGGATTTCTGGCTCTTTTCTCTTCGCC TTAAATTCGGGTGTCTTTTATGAATAATCAAAAGCAGCAAAAGCCAACGCTATCAGGCCA GCGTTTTAAAACCAGAAAAAGAGATGAAAAAGAGAGGTTTGACCCTACTCAGTTTCAAGA CTGTATTATTCAAGGCTTAACTGAAACTGGTACTGATTTGGAAGCAGTAGCAAAGTTTCT TGATGCTTCTGGAGCAAAACTTGATTACCGCCGATATGCAGAAACACTCTTTGACATTCT GGTGGCCGGCGGAATGCTGGCCCCAGGTGGTACACTGGCAGACGACATGATGCGGACAGA TGTCTGTGTGTTTGCAGCACAAGAAGACCTAGAGACCATGCAAGCATTTGCTCAGGTTTT TAACAAGTTAATCAGGCGCTACAAATACCTGGAGAAAGGTTTTGAAGATGAAGTGAAAAA GCTGCTGCTGTTCTTAAAGGGTTTTTCAGAGTCGGAGAGGAACAAGCTGGCTATGTTGAC TGGTGTTCTTCTGGCTAATGGAACACTTAATGCATCCATTCTTAATAGCCTTTATAATGA GAACTTGGTTAAAGAAGGGGTTTCAGCAGCTTTTGCTGTAAAGCTCTTTAAATCATGGAT AAATGAAAAAGATATCAATGCAGTAGCTGCAAGTCTTCGGAAAGTGAGCATGGATAACAG ACTGATGGAACTTTTTCCTGCCAATAAACAAAGCGTTGAACACTTCACGAAGTATTTTAC TGAGGCAGGCTTGAAAGAACTTTCGGAATATGTTCGGAATCAGCAAACCATAGGAGCTCG TAAGGAACTCCAGAAAGAACTTCAAGAACAGATGTCCCGTGGTGATCCATTTAAGGATAT AATTTTGTATGTCAAGGAGGAGATGAAAAAAAACAACATCCCAGAACCCGTTGTCATCGG AATTGTGTGGTCCAGTGTAATGAGCACTGTGGAATGGAACAAAAAAGAGGAGCTTGTAGC AGAGCAAGCCATTAAGCACTTGAAGCAATACAGCCCTCTACTTGCTGCCTTTACAACTCA AGGTCAGTCTGAGCTGACTCTGTTACTGAAGATTCAAGAGTATTGCTATGACAACATTCA TTTCATGAAAGCCTTCCAGAAAATAGTGGTGCTTTTTTATAAAGCTGAAGTCCTGAGTGA AGAACCCATTCTGAAGTGGTATAAAGATGCACATGTCGCAAAGGGGAAAAGTGTCTTCCT TGAGCAAATGAAAAAGTTTGTAGAGTGGCTCAAAAATGCTGAAGAAGAATCTGAGTCTGA AGCTGAAGAAGGTGACTGAATTTTGAAACCACACCCTCAGTAAAGCAAACAGGAGTTGTA GATAAAATGTCATGTCTCATGTGTCCTGGTTCTTACATCTTCCTACCTCCCTATATCAAG CATGATATAAGGGCTTTCATGGCAAATTTTATTTTAACTGTTTCTATGGTTACTGGAAAT GTTGGATTTAGTTTCTAAAACCATGTTTTAAGTAGCTACAGGAGCTATAGATTTGAATCT AATGTTGCATTAGTCTTTTCAGTTATCTTCTACCTCCTGTATTTTCTACTGATAATAATG TAATTTAAGGACTTCCACAATGAACAGTTCACTTTATTCCCTGGGTTTTCTATATGAACA GTTTTCAAGATATGATTTGGTTAAAAATAATTTGTTATAAAAATTCTGTTTGCAAATTAA ACTGTAAAAGTATCCAAAAGTCTCAGAAGGCAGTGATTTGTGTGATAATTTGGTATGCCC GAAGCCCTGCTTATCAATGAAAATCTCATATACAGTTGAATTCATTACCATGAATCTTGA GTATTTGGACCATTGCTTGCATGTTAATATTTTCTCGCGTTTTTAATCCTAGATGTACTT GAGCTCAATTGTCTGCTCTCTGATTTTCTTTCCTTAAAATGGAGAACAAACTTGAAAGTG AAGTCTTGAGGGAATTGTATGTGGCATAGGTGGTGGGAAAAAAAAGTTGAGCTTTTTCCC ATTGAGAAACTTCTGCATTCAGTTTATATCTTTACAGACAAAATAAATGAGTATTTTGGA GTTCCCATCGTGGCTCATCAGAAATGAATCTGACTAGCATCCATGAGGATGCAGGTTCAA TCTCCGGCCTCACTCAGTGGTGTATTAAGGATCTGGCATTGCCACGAGCTGTGGTGTAGG TCGCAGATGTGGCTCGGATCTGGTGTTGCTGTGGCTGTGGTGTAGGCTGGCAGCTACAGC TCCTATTAGACCGCTAGCCGGGGAACCTCCAAATGCCTCGGGTGTGGCCCTAAAAAGACA AAAGACAAAAAAAACAACAACAAAAAAAGAGGTCCTTTTTCATTCAATCATTTTCAAATA TGTCTTAGAAAAGTCGCATCATATTAAGTATTTTACACTTCTCACGCACTTAGATTGGTA AGAAAGGACTCATAGTGCAGGTAAAGTAAATGTACTAAACCCAGAAAATTGTTGAAAGAA AAGTGGTGGACATGTTCTATTTGAAACGCTAAATATAGCTCCTATTTCCTCTTGGCTTAA AATAATGCAAAGAAGTGCAGTGATAATGTATTCTTACTTGATCATACTGGACCAGCTTCA TTCTCTTCACAGATTCACTTATGACTCAAGCATCTGACTATTAACTTTGTTGCCAGTTTT TAAAAGTTGCCAGAAGCCAAATCTCTCTTCTGTACAGTTGATCGATTTATTTTAATGGCT GCCTTTGAATTTCCGTCTTTCTTTTCTTGTTGGTTCTCATCTATATATGTAGTCATTAGA AAAGAAAGTGTGGCCACGCTTTTTGGTGGAAAGACTTAGTTTTAAATGTGAACGTTTTGA AAATTTTTTTGATTGGTGAAAGAAATGAAACTGGAATAATGCAACTAGAGACTAATTGAT ATTGCCCCTATCAAAGGTGCCATTCTTATGAGCCAAGAATTTGGTGTTTAAAAGTTCATC TTGAGGAAATAACATGTAATAAAGTTTGAAGTAAAGATACAATAACCTTATGAAGAAGAG CATTATAACTGATCATATTGTGAATGGACTGAAATTGTTAAATGAATAACTTGATAAAGC TCTCATGCACAGGCAAAATGTATTCAGTTGGTTTCTACATAGTGATCTGCTTTTACTTTG TAATTTGTAGTCCTCAAAAGGCTTTTTTTTTTTTTTAAATAAAGTCCATCCTTACGCTTA GGTTTATGTAGGTCAGTCCTTTTTAATTTTTTATTTTTTTGTAAATTCCATATTAACACC TAGTGGTAATTGTATATTCTGTGTTCCTATGTCTCTACTGTGTAAGCATTAAATAATTGT TCTTTTCGTCCTTAATGACTCTCAAACTGGAAACACCTACATGGAATTCTGATGTAGCGG CAACCACATGAACATTTCTACAACCAAATCATCGCATGTTACTGCAGTACAGTGTACCCT GTTTATTATATACTGTGTATAGTGAAAGAGTGTGTAGTCTTCCAGAACTACATTATGATC TTTGATGATAGAGTTTTTACCTTCATAATGACAAAGCAGTGTTTAACTTACTACAATATT ATATAATATGGATAAGTCACCTGTGACAGTATAGTGTAAAGAAAGGGAATGCTTTCTAAA AAGACTTAGCAGATTTTCATTTTGAATTTTAAGTGGCGATTTTAAAATTCAGCTGCCAGT GCCAACCTCTGGCCTCAGATATGTAATTCTTAATATAGATGTTAAAATTGTACTTGTAAT TATGATCAGATAAATGTTAATTGATTTTCCTAACTTGGTGTCGGTTTCTAAGGATAAGTC TCCTTTTAGATGCCATAATTAAATATGTGTTTAGAGCTGATCATAAGTTTCTTAATTATT CTGGGAGCATTGTCCTAAAGACATTTTTTATTATGTTCTTAATGAAATTGCCAAATGCCA ACAGGATATTCTGACAGCGTAATAATGGTGGGGAGAAGAAATGCATGTGACTGAGAGATT TACTTCTGATTCAGTGTTTCTTAGATCTTTTCTCATCAACCTGACCCTTGAAACCTTTAA AACTTTTTTTTAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGAGGAGACACCGCCGCAGTTGCCGCCACCTCCGGGATTTCTGGCTCTTTTCTCTTCGCC TTAAATTCGGGTGTCTTTTATGAATAATCAAAAGCAGCAAAAGCCAACGCTATCAGGCCA GCGTTTTAAAACCAGAAAAAGAGATGAAAAAGAGAGGTTTGACCCTACTCAGTTTCAAGA CTGTATTATTCAAGGCTTAACTGAAACTGGTACTGATTTGGAAGCAGTAGCAAAGTTTCT TGATGCTTCTGGAGCAAAACTTGATTACCGCCGATATGCAGAAACACTCTTTGACATTCT GGTGGCCGGCGGAATGCTGGCCCCAGGTGGTACACTGGCAGACGACATGATGCGGACAGA TGTCTGTGTGTTTGCAGCACAAGAAGACCTAGAGACCATGCAAGCATTTGCTCAGGTTTT TAACAAGTTAATCAGGCGCTACAAATACCTGGAGAAAGGTTTTGAAGATGAAGTGAAAAA GCTGCTGCTGTTCTTAAAGGGTTTTTCAGAGTCGGAGAGGAACAAGCTGGCTATGTTGAC TGGTGTTCTTCTGGCTAATGGAACACTTAATGCATCCATTCTTAATAGCCTTTATAATGA GAACTTGGTTAAAGAAGGGGTTTCAGCAGCTTTTGCTGTAAAGCTCTTTAAATCATGGAT AAATGAAAAAGATATCAATGCAGTAGCTGCAAGTCTTCGGAAAGTGAGCATGGATAACAG ACTGATGGAACTTTTTCCTGCCAATAAACAAAGCGTTGAACACTTCACGAAGTATTTTAC TGAGGCAGGCTTGAAAGAACTTTCGGAATATGTTCGGAATCAGCAAACCATAGGAGCTCG TAAGGAACTCCAGAAAGAACTTCAAGAACAGATGTCCCGTGGTGATCCATTTAAGGATAT AATTTTGTATGTCAAGGAGGAGATGAAAAAAAACAACATCCCAGAACCCGTTGTCATCGG AATTGTGTGGTCCAGTGTAATGAGCACTGTGGAATGGAACAAAAAAGAGGAGCTTGTAGC AGAGCAAGCCATTAAGCACTTGAAGCAATACAGCCCTCTACTTGCTGCCTTTACAACTCA AGGTCAGTCTGAGCTGACTCTGTTACTGAAGATTCAAGAGTATTGCTATGACAACATTCA TTTCATGAAAGCCTTCCAGAAAATAGTGGTGCTTTTTTATAAAGCTGAAGTCCTGAGTGA AGAACCCATTCTGAAGTGGTATAAAGATGCACATGTCGCAAAGGGGAAAAGTGTCTTCCT TGAGCAAATGAAAAAGTTTGTAGAGTGGCTCAAAAATGCTGAAGAAGAATCTGAGTCTGA AGCTGAAGAAGGTGACTGAATTTTGAAACCACACCCTCAGTAAAGCAAACAGGAGTTGTA GATAAAATGTCATGTCTCATGTGTCCTGGTTCTTACATCTTCCTACCTCCCTATATCAAG CATGATATAAGGGCTTTCATGGCAAATTTTATTTTAACTGTTTCTATGGTTACTGGAAAT GTTGGATTTAGTTTCTAAAACCATGTTTTAAGTAGCTACAGGAGCTATAGATTTGAATCT AATGTTGCATTAGTCTTTTCAGTTATCTTCTACCTCCTGTATTTTCTACTGATAATAATG TAATTTAAGGACTTCCACAATGAACAGTTCACTTTATTCCCTGGGTTTTCTATATGAACA GTTTTCAAGATATGATTTGGTTAAAAATAATTTGTTATAAAAATTCTGTTTGCAAATTAA ACTGTAAAAGTATCCAAAAGTCTCAGAAGGCAGTGATTTGTGTGATAATTTGGTATGCCC GAAGCCCTGCTTATCAATGAAAATCTCATATACAGTTGAATTCATTACCATGAATCTTGA GTATTTGGACCATTGCTTGCATGTTAATATTTTCTCGCGTTTTTAATCCTAGATGTACTT GAGCTCAATTGTCTGCTCTCTGATTTTCTTTCCTTAAAATGGAGAACAAACTTGAAAGTG AAGTCTTGAGGGAATTGTATGTGGCATAGGTGGTGGGAAAAAAAAGTTGAGCTTTTTCCC ATTGAGAAACTTCTGCATTCAGTTTATATCTTTACAGACAAAATAAATGAGTATTTTGGA GTTCCCATCGTGGCTCATCAGAAATGAATCTGACTAGCATCCATGAGGATGCAGGTTCAA TCTCCGGCCTCACTCAGTGGTGTATTAAGGATCTGGCATTGCCACGAGCTGTGGTGTAGG TCGCAGATGTGGCTCGGATCTGGTGTTGCTGTGGCTGTGGTGTAGGCTGGCAGCTACAGC TCCTATTAGACCGCTAGCCGGGGAACCTCCAAATGCCTCGGGTGTGGCCCTAAAAAGACA AAAGACAAAAAAAACAACAACAAAAAAAGAGGTCCTTTTTCATTCAATCATTTTCAAATA TGTCTTAGAAAAGTCGCATCATATTAAGTATTTTACACTTCTCACGCACTTAGATTGGTA AGAAAGGACTCATAGTGCAGGTAAAGTAAATGTACTAAACCCAGAAAATTGTTGAAAGAA AAGTGGTGGACATGTTCTATTTGAAACGCTAAATATAGCTCCTATTTCCTCTTGGCTTAA AATAATGCAAAGAAGTGCAGTGATAATGTATTCTTACTTGATCATACTGGACCAGCTTCA TTCTCTTCACAGATTCACTTATGACTCAAGCATCTGACTATTAACTTTGTTGCCAGTTTT TAAAAGTTGCCAGAAGCCAAATCTCTCTTCTGTACAGTTGATCGATTTATTTTAATGGCT GCCTTTGAATTTCCGTCTTTCTTTTCTTGTTGGTTCTCATCTATATATGTAGTCATTAGA AAAGAAAGTGTGGCCACGCTTTTTGGTGGAAAGACTTAGTTTTAAATGTGAACGTTTTGA AAATTTTTTTGATTGGTGAAAGAAATGAAACTGGAATAATGCAACTAGAGACTAATTGAT ATTGCCCCTATCAAAGGTGCCATTCTTATGAGCCAAGAATTTGGTGTTTAAAAGTTCATC TTGAGGAAATAACATGTAATAAAGTTTGAAGTAAAGATACAATAACCTTATGAAGAAGAG CATTATAACTGATCATATTGTGAATGGACTGAAATTGTTAAATGAATAACTTGATAAAGC TCTCATGCACAGGCAAAATGTATTCAGTTGGTTTCTACATAGTGATCTGCTTTTACTTTG TAATTTGTAGTCCTCAAAAGGCTTTTTTTTTTTTTTAAATAAAGTCCATCCTTACGCTTA GGTTTATGTAGGTCAGTCCTTTTTAATTTTTTATTTTTTTGTAAATTCCATATTAACACC TAGTGGTAATTGTATATTCTGTGTTCCTATGTCTCTACTGTGTAAGCATTAAATAATTGT TCTTTTCGTCCTTAATGACTCTCAAACTGGAAACACCTACATGGAATTCTGATGTAGCGG CAACCACATGAACATTTCTACAACCAAATCATCGCATGTTACTGCAGTACAGTGTACCCT GTTTATTATATACTGTGTATAGTGAAAGAGTGTGTAGTCTTCCAGAACTACATTATGATC TTTGATGATAGAGTTTTTACCTTCATAATGACAAAGCAGTGTTTAACTTACTACAATATT ATATAATATGGATAAGTCACCTGTGACAGTATAGTGTAAAGAAAGGGAATGCTTTCTAAA AAGACTTAGCAGATTTTCATTTTGAATTTTAAGTGGCGATTTTAAAATTCAGCTGCCAGT GCCAACCTCTGGCCTCAGATATGTAATTCTTAATATAGATGTTAAAATTGTACTTGTAAT TATGATCAGATAAATGTTAATTGATTTTCCTAACTTGGTGTCGGTTTCTAAGGATAAGTC TCCTTTTAGATGCCATAATTAAATATGTGTTTAGAGCTGATCATAAGTTTCTTAATTATT CTGGGAGCATTGTCCTAAAGACATTTTTTATTATGTTCTTAATGAAATTGCCAAATGCCA ACAGGATATTCTGACAGCGTAATAATGGTGGGGAGAAGAAATGCATGTGACTGAGAGATT TACTTCTGATTCAGTGTTTCTTAGATCTTTTCTCATCAACCTGACCCTTGAAACCTTTAA AACTTTTTTTTAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 785-1621, + strand, RNAz p=0.860721 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 785-1621, + strand, RNAz p=0.860721 |
| Aligned organism(s): 130 entry(ies) | More info |
| Aligned organism(s): 130 entry(ies) | Help | Less info |
| 142-320, gnl|bosTau2|chr2 (51005954-51005776) | |
| 142-320, gnl|canFam2|chr37 (13008555-13008379) | |
| 142-320, gnl|canFam2|chr37 (13008377-13008577) | |
| 142-320, gnl|danRer3|chr22 (13098675-13098499) | |
| 142-320, gnl|danRer3|chr22 (13098497-13098696) | |
| 142-320, gnl|dasNov1|scaffold_27330 (6853-6677) | |
| 142-320, gnl|dasNov1|scaffold_27330 (6675-6874) | |
| 142-320, gnl|echTel1|scaffold_278816 (39869-39678) | |
| 142-320, gnl|echTel1|scaffold_292620 (13310-13134) | |
| 142-320, gnl|fr1|chrUn (161959731-161959555) | |
| 142-320, gnl|fr1|chrUn (88931764-88931970) | |
| 142-320, gnl|galGal2|chr7 (12185343-12185167) | |
| 142-320, gnl|galGal2|chr7 (12185165-12185352) | |
| 142-320, gnl|hg17|chr2 (201505569-201505771) | |
| 142-320, gnl|Hg17|chr2 (201505568-201505746) | |
| 142-320, gnl|hg17|chr3 (173627337-173627515) | |
| 142-320, gnl|loxAfr1|scaffold_1178 (133126-132950) | |
| 142-320, gnl|loxAfr1|scaffold_1178 (132948-133151) | |
| 142-320, gnl|mm7|chr1 (58648764-58648965) | |
| 142-320, gnl|Mm7|chr1 (58648763-58648941) | |
| 142-320, gnl|mm7|chr11 (105882800-105882624) | |
| 142-320, gnl|monDom2|scaffold_39 (14096611-14096436) | |
| 142-320, gnl|monDom2|scaffold_64 (9040639-9040834) | |
| 142-320, gnl|oryCun1|scaffold_185748 (5883-5709) | |
| 142-320, gnl|oryCun1|scaffold_185748 (5707-5882) | |
| 142-320, gnl|panTro1|chr13 (91485259-91485461) | |
| 142-320, gnl|panTro1|chr2 (177157602-177157780) | |
| 142-320, gnl|rheMac2|chr12 (64569152-64569354) | |
| 142-320, gnl|rheMac2|chr2 (114603086-114602908) | |
| 142-320, gnl|rn3|chr8 (128574942-128574766) | |
| 142-320, gnl|rn3|chr9 (57205228-57205430) | |
| 142-320, gnl|tetNig1|chr3 (356859-356683) | |
| 142-320, gnl|tetNig1|chr3 (356681-356868) | |
| 142-320, gnl|xenTro1|scaffold_203 (277022-276846) | |
| 142-320, gnl|xenTro1|scaffold_203 (276844-277028) | |
| 480-618, gnl|bosTau2|chr2 (51002612-51002474) | |
| 480-618, gnl|canFam2|chr37 (13012280-13012176) | |
| 480-618, gnl|canFam2|chr37 (13012137-13012291) | |
| 480-618, gnl|danRer3|chr22 (13099544-13099441) | |
| 480-618, gnl|danRer3|chr22 (13099404-13099552) | |
| 480-618, gnl|dasNov1|scaffold_27330 (10187-10083) | |
| 480-618, gnl|dasNov1|scaffold_27330 (10044-10198) | |
| 480-618, gnl|echTel1|scaffold_277931 (89541-89645) | |
| 480-618, gnl|echTel1|scaffold_277931 (89682-89536) | |
| 480-618, gnl|fr1|chrUn (161960705-161960602) | |
| 480-618, gnl|fr1|chrUn (88932719-88932865) | |
| 480-618, gnl|galGal2|chr7 (12188401-12188295) | |
| 480-618, gnl|galGal2|chr7 (12188258-12188404) | |
| 480-618, gnl|hg17|chr2 (201507329-201507483) | |
| 480-618, gnl|Hg17|chr2 (201507333-201507471) | |
| 480-618, gnl|hg17|chr3 (117848156-117848262) | |
| 480-618, gnl|loxAfr1|scaffold_1178 (136613-136511) | |
| 480-618, gnl|loxAfr1|scaffold_1178 (136471-136626) | |
| 480-618, gnl|mm7|chr1 (58651790-58651944) | |
| 480-618, gnl|Mm7|chr1 (58651794-58651932) | |
| 480-618, gnl|mm7|chr13 (8008494-8008393) | |
| 480-618, gnl|monDom2|scaffold_39 (14096885-14096780) | |
| 480-618, gnl|monDom2|scaffold_64 (9044302-9044448) | |
| 480-618, gnl|oryCun1|scaffold_53458 (3142-3036) | |
| 480-618, gnl|oryCun1|scaffold_53458 (2999-3153) | |
| 480-618, gnl|panTro1|chr13 (91487648-91487544) | |
| 480-618, gnl|panTro1|chr13 (91487505-91487659) | |
| 480-618, gnl|rheMac2|chr12 (64571044-64570940) | |
| 480-618, gnl|rheMac2|chr12 (64570901-64571055) | |
| 480-618, gnl|rn3|chr8 (128575239-128575135) | |
| 480-618, gnl|rn3|chr9 (57208529-57208683) | |
| 480-618, gnl|tetNig1|chr3 (357481-357378) | |
| 480-618, gnl|tetNig1|chr3 (357341-357487) | |
| 480-618, gnl|xenTro1|scaffold_203 (278895-278789) | |
| 480-618, gnl|xenTro1|scaffold_203 (278752-278906) | |
| 727-902, gnl|bosTau2|chr2 (51001635-51001460) | |
| 727-902, gnl|canFam2|chr37 (13013373-13013267) | |
| 727-902, gnl|danRer3|chr22 (13103515-13103409) | |
| 727-902, gnl|dasNov1|scaffold_27330 (11101-10995) | |
| 727-902, gnl|echTel1|scaffold_277931 (88482-88588) | |
| 727-902, gnl|fr1|chrUn (161961673-161961567) | |
| 727-902, gnl|galGal2|chr7 (12189362-12189256) | |
| 727-902, gnl|Hg17|chr2 (201508451-201508626) | |
| 727-902, gnl|hg17|chr3 (117847876-117847982) | |
| 727-902, gnl|loxAfr1|scaffold_1178 (137969-137871) | |
| 727-902, gnl|Mm7|chr1 (58652429-58652604) | |
| 727-902, gnl|mm7|chr13 (8008760-8008666) | |
| 727-902, gnl|monDom2|scaffold_39 (14097165-14097059) | |
| 727-902, gnl|oryCun1|scaffold_102119 (3802-3696) | |
| 727-902, gnl|panTro1|chr13 (91488802-91488696) | |
| 727-902, gnl|rheMac2|chr12 (64572177-64572071) | |
| 727-902, gnl|rn3|chr8 (128575518-128575413) | |
| 727-902, gnl|tetNig1|chr3 (357939-357833) | |
| 727-902, gnl|xenTro1|scaffold_203 (280006-279900) | |
| 1043-1189, gnl|bosTau2|chr2 (51000387-51000241) | |
| 1043-1189, gnl|canFam2|chr37 (13014964-13014826) | |
| 1043-1189, gnl|canFam2|chr37 (13014824-13014971) | |
| 1043-1189, gnl|danRer3|chr22 (13104039-13103901) | |
| 1043-1189, gnl|danRer3|chr22 (13103899-13104043) | |
| 1043-1189, gnl|dasNov1|scaffold_27330 (12734-12596) | |
| 1043-1189, gnl|dasNov1|scaffold_27330 (12594-12741) | |
| 1043-1189, gnl|echTel1|scaffold_277931 (86980-87118) | |
| 1043-1189, gnl|echTel1|scaffold_277931 (87120-86973) | |
| 1043-1189, gnl|fr1|chrUn (161962688-161962550) | |
| 1043-1189, gnl|fr1|chrUn (161962548-161962695) | |
| 1043-1189, gnl|galGal2|chr7 (12190337-12190199) | |
| 1043-1189, gnl|galGal2|chr7 (12190197-12190341) | |
| 1043-1189, gnl|hg17|chr2 (201510210-201510357) | |
| 1043-1189, gnl|Hg17|chr2 (201510208-201510359) | |
| 1043-1189, gnl|hg17|chr3 (117847590-117847728) | |
| 1043-1189, gnl|loxAfr1|scaffold_1178 (139233-139095) | |
| 1043-1189, gnl|loxAfr1|scaffold_1178 (139093-139240) | |
| 1043-1189, gnl|mm7|chr1 (58654703-58654850) | |
| 1043-1189, gnl|Mm7|chr1 (58654701-58654847) | |
| 1043-1189, gnl|mm7|chr13 (8009050-8008912) | |
| 1043-1189, gnl|monDom2|scaffold_39 (14097451-14097313) | |
| 1043-1189, gnl|monDom2|scaffold_64 (9046398-9046545) | |
| 1043-1189, gnl|oryCun1|scaffold_102119 (4088-3950) | |
| 1043-1189, gnl|oryCun1|scaffold_212053 (199973-200120) | |
| 1043-1189, gnl|panTro1|chr13 (91490544-91490406) | |
| 1043-1189, gnl|panTro1|chr13 (91490404-91490551) | |
| 1043-1189, gnl|rheMac2|chr12 (64573895-64573757) | |
| 1043-1189, gnl|rheMac2|chr12 (64573755-64573902) | |
| 1043-1189, gnl|rn3|chr8 (128575803-128575665) | |
| 1043-1189, gnl|rn3|chr9 (57210862-57211009) | |
| 1043-1189, gnl|tetNig1|chr3 (358359-358221) | |
| 1043-1189, gnl|tetNig1|chr3 (358219-358361) | |
| 1043-1189, gnl|xenTro1|scaffold_203 (281497-281359) | |
| 1043-1189, gnl|xenTro1|scaffold_203 (281357-281501) | |
| 1306-2095, gnl|bosTau2|chr2 (50998503-50997702) | |
| 1306-2095, gnl|Hg17|chr2 (201512374-201513187) | |
| 1306-2095, gnl|Mm7|chr1 (58656122-58656872) | |
| 2377-4086, gnl|bosTau2|chr2 (50997700-50996006) | |
| 2377-4086, gnl|Hg17|chr2 (201513189-201514904) | |
| 2377-4086, gnl|Mm7|chr1 (58656874-58658407) |
| Aligned organism(s): 130 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 142-320, gnl|bosTau2|chr2 (51005954-51005776) | |
| 142-320, gnl|canFam2|chr37 (13008555-13008379) | |
| 142-320, gnl|canFam2|chr37 (13008377-13008577) | |
| 142-320, gnl|danRer3|chr22 (13098675-13098499) | |
| 142-320, gnl|danRer3|chr22 (13098497-13098696) | |
| 142-320, gnl|dasNov1|scaffold_27330 (6853-6677) | |
| 142-320, gnl|dasNov1|scaffold_27330 (6675-6874) | |
| 142-320, gnl|echTel1|scaffold_278816 (39869-39678) | |
| 142-320, gnl|echTel1|scaffold_292620 (13310-13134) | |
| 142-320, gnl|fr1|chrUn (161959731-161959555) | |
| 142-320, gnl|fr1|chrUn (88931764-88931970) | |
| 142-320, gnl|galGal2|chr7 (12185343-12185167) | |
| 142-320, gnl|galGal2|chr7 (12185165-12185352) | |
| 142-320, gnl|hg17|chr2 (201505569-201505771) | |
| 142-320, gnl|Hg17|chr2 (201505568-201505746) | |
| 142-320, gnl|hg17|chr3 (173627337-173627515) | |
| 142-320, gnl|loxAfr1|scaffold_1178 (133126-132950) | |
| 142-320, gnl|loxAfr1|scaffold_1178 (132948-133151) | |
| 142-320, gnl|mm7|chr1 (58648764-58648965) | |
| 142-320, gnl|Mm7|chr1 (58648763-58648941) | |
| 142-320, gnl|mm7|chr11 (105882800-105882624) | |
| 142-320, gnl|monDom2|scaffold_39 (14096611-14096436) | |
| 142-320, gnl|monDom2|scaffold_64 (9040639-9040834) | |
| 142-320, gnl|oryCun1|scaffold_185748 (5883-5709) | |
| 142-320, gnl|oryCun1|scaffold_185748 (5707-5882) | |
| 142-320, gnl|panTro1|chr13 (91485259-91485461) | |
| 142-320, gnl|panTro1|chr2 (177157602-177157780) | |
| 142-320, gnl|rheMac2|chr12 (64569152-64569354) | |
| 142-320, gnl|rheMac2|chr2 (114603086-114602908) | |
| 142-320, gnl|rn3|chr8 (128574942-128574766) | |
| 142-320, gnl|rn3|chr9 (57205228-57205430) | |
| 142-320, gnl|tetNig1|chr3 (356859-356683) | |
| 142-320, gnl|tetNig1|chr3 (356681-356868) | |
| 142-320, gnl|xenTro1|scaffold_203 (277022-276846) | |
| 142-320, gnl|xenTro1|scaffold_203 (276844-277028) | |
| 480-618, gnl|bosTau2|chr2 (51002612-51002474) | |
| 480-618, gnl|canFam2|chr37 (13012280-13012176) | |
| 480-618, gnl|canFam2|chr37 (13012137-13012291) | |
| 480-618, gnl|danRer3|chr22 (13099544-13099441) | |
| 480-618, gnl|danRer3|chr22 (13099404-13099552) | |
| 480-618, gnl|dasNov1|scaffold_27330 (10187-10083) | |
| 480-618, gnl|dasNov1|scaffold_27330 (10044-10198) | |
| 480-618, gnl|echTel1|scaffold_277931 (89541-89645) | |
| 480-618, gnl|echTel1|scaffold_277931 (89682-89536) | |
| 480-618, gnl|fr1|chrUn (161960705-161960602) | |
| 480-618, gnl|fr1|chrUn (88932719-88932865) | |
| 480-618, gnl|galGal2|chr7 (12188401-12188295) | |
| 480-618, gnl|galGal2|chr7 (12188258-12188404) | |
| 480-618, gnl|hg17|chr2 (201507329-201507483) | |
| 480-618, gnl|Hg17|chr2 (201507333-201507471) | |
| 480-618, gnl|hg17|chr3 (117848156-117848262) | |
| 480-618, gnl|loxAfr1|scaffold_1178 (136613-136511) | |
| 480-618, gnl|loxAfr1|scaffold_1178 (136471-136626) | |
| 480-618, gnl|mm7|chr1 (58651790-58651944) | |
| 480-618, gnl|Mm7|chr1 (58651794-58651932) | |
| 480-618, gnl|mm7|chr13 (8008494-8008393) | |
| 480-618, gnl|monDom2|scaffold_39 (14096885-14096780) | |
| 480-618, gnl|monDom2|scaffold_64 (9044302-9044448) | |
| 480-618, gnl|oryCun1|scaffold_53458 (3142-3036) | |
| 480-618, gnl|oryCun1|scaffold_53458 (2999-3153) | |
| 480-618, gnl|panTro1|chr13 (91487648-91487544) | |
| 480-618, gnl|panTro1|chr13 (91487505-91487659) | |
| 480-618, gnl|rheMac2|chr12 (64571044-64570940) | |
| 480-618, gnl|rheMac2|chr12 (64570901-64571055) | |
| 480-618, gnl|rn3|chr8 (128575239-128575135) | |
| 480-618, gnl|rn3|chr9 (57208529-57208683) | |
| 480-618, gnl|tetNig1|chr3 (357481-357378) | |
| 480-618, gnl|tetNig1|chr3 (357341-357487) | |
| 480-618, gnl|xenTro1|scaffold_203 (278895-278789) | |
| 480-618, gnl|xenTro1|scaffold_203 (278752-278906) | |
| 727-902, gnl|bosTau2|chr2 (51001635-51001460) | |
| 727-902, gnl|canFam2|chr37 (13013373-13013267) | |
| 727-902, gnl|danRer3|chr22 (13103515-13103409) | |
| 727-902, gnl|dasNov1|scaffold_27330 (11101-10995) | |
| 727-902, gnl|echTel1|scaffold_277931 (88482-88588) | |
| 727-902, gnl|fr1|chrUn (161961673-161961567) | |
| 727-902, gnl|galGal2|chr7 (12189362-12189256) | |
| 727-902, gnl|Hg17|chr2 (201508451-201508626) | |
| 727-902, gnl|hg17|chr3 (117847876-117847982) | |
| 727-902, gnl|loxAfr1|scaffold_1178 (137969-137871) | |
| 727-902, gnl|Mm7|chr1 (58652429-58652604) | |
| 727-902, gnl|mm7|chr13 (8008760-8008666) | |
| 727-902, gnl|monDom2|scaffold_39 (14097165-14097059) | |
| 727-902, gnl|oryCun1|scaffold_102119 (3802-3696) | |
| 727-902, gnl|panTro1|chr13 (91488802-91488696) | |
| 727-902, gnl|rheMac2|chr12 (64572177-64572071) | |
| 727-902, gnl|rn3|chr8 (128575518-128575413) | |
| 727-902, gnl|tetNig1|chr3 (357939-357833) | |
| 727-902, gnl|xenTro1|scaffold_203 (280006-279900) | |
| 1043-1189, gnl|bosTau2|chr2 (51000387-51000241) | |
| 1043-1189, gnl|canFam2|chr37 (13014964-13014826) | |
| 1043-1189, gnl|canFam2|chr37 (13014824-13014971) | |
| 1043-1189, gnl|danRer3|chr22 (13104039-13103901) | |
| 1043-1189, gnl|danRer3|chr22 (13103899-13104043) | |
| 1043-1189, gnl|dasNov1|scaffold_27330 (12734-12596) | |
| 1043-1189, gnl|dasNov1|scaffold_27330 (12594-12741) | |
| 1043-1189, gnl|echTel1|scaffold_277931 (86980-87118) | |
| 1043-1189, gnl|echTel1|scaffold_277931 (87120-86973) | |
| 1043-1189, gnl|fr1|chrUn (161962688-161962550) | |
| 1043-1189, gnl|fr1|chrUn (161962548-161962695) | |
| 1043-1189, gnl|galGal2|chr7 (12190337-12190199) | |
| 1043-1189, gnl|galGal2|chr7 (12190197-12190341) | |
| 1043-1189, gnl|hg17|chr2 (201510210-201510357) | |
| 1043-1189, gnl|Hg17|chr2 (201510208-201510359) | |
| 1043-1189, gnl|hg17|chr3 (117847590-117847728) | |
| 1043-1189, gnl|loxAfr1|scaffold_1178 (139233-139095) | |
| 1043-1189, gnl|loxAfr1|scaffold_1178 (139093-139240) | |
| 1043-1189, gnl|mm7|chr1 (58654703-58654850) | |
| 1043-1189, gnl|Mm7|chr1 (58654701-58654847) | |
| 1043-1189, gnl|mm7|chr13 (8009050-8008912) | |
| 1043-1189, gnl|monDom2|scaffold_39 (14097451-14097313) | |
| 1043-1189, gnl|monDom2|scaffold_64 (9046398-9046545) | |
| 1043-1189, gnl|oryCun1|scaffold_102119 (4088-3950) | |
| 1043-1189, gnl|oryCun1|scaffold_212053 (199973-200120) | |
| 1043-1189, gnl|panTro1|chr13 (91490544-91490406) | |
| 1043-1189, gnl|panTro1|chr13 (91490404-91490551) | |
| 1043-1189, gnl|rheMac2|chr12 (64573895-64573757) | |
| 1043-1189, gnl|rheMac2|chr12 (64573755-64573902) | |
| 1043-1189, gnl|rn3|chr8 (128575803-128575665) | |
| 1043-1189, gnl|rn3|chr9 (57210862-57211009) | |
| 1043-1189, gnl|tetNig1|chr3 (358359-358221) | |
| 1043-1189, gnl|tetNig1|chr3 (358219-358361) | |
| 1043-1189, gnl|xenTro1|scaffold_203 (281497-281359) | |
| 1043-1189, gnl|xenTro1|scaffold_203 (281357-281501) | |
| 1306-2095, gnl|bosTau2|chr2 (50998503-50997702) | |
| 1306-2095, gnl|Hg17|chr2 (201512374-201513187) | |
| 1306-2095, gnl|Mm7|chr1 (58656122-58656872) | |
| 2377-4086, gnl|bosTau2|chr2 (50997700-50996006) | |
| 2377-4086, gnl|Hg17|chr2 (201513189-201514904) | |
| 2377-4086, gnl|Mm7|chr1 (58656874-58658407) |
| Expressed library(ies): 56 entry(ies) | More info |
| Expressed library(ies): 56 entry(ies) | Help | Less info |
| fco (1.8865) | |
| ret (1.41607) | |
| mgp (1.38408) | |
| spl (1.28866) | |
| tbr (1.23343) | |
| lin (1.16482) | |
| thg (1.14112) | |
| liv (0.877706) | |
| fcc (0.791139) | |
| kid (0.778412) | |
| fty (0.703359) | |
| bfe (0.599431) | |
| aor (0.585823) | |
| fce (0.543183) | |
| mgm (0.541028) | |
| lyg (0.532411) | |
| rec (0.519211) | |
| nco (0.485201) | |
| fat (0.442282) | |
| ski (0.440205) | |
| lnt (0.426925) | |
| cty (0.41632) | |
| nca (0.410621) | |
| ste (0.405625) | |
| ese (0.379507) | |
| tra (0.369276) | |
| gul (0.355177) | |
| sin (0.349895) | |
| jca (0.34188) | |
| nje (0.33184) | |
| mga (0.32041) | |
| lun (0.300978) | |
| isp (0.300752) | |
| ova (0.258264) | |
| sug (0.254582) | |
| bla (0.248694) | |
| cbe (0.239234) | |
| ecc (0.23007) | |
| mas (0.210305) | |
| tes (0.207814) | |
| eje (0.197668) | |
| col (0.195008) | |
| nep (0.183925) | |
| sag (0.182715) | |
| ton (0.1755) | |
| fbs (0.175346) | |
| mcp (0.170648) | |
| cut (0.169924) | |
| csp (0.161186) | |
| nmm (0.132802) | |
| ute (0.132784) | |
| pgl (0.118483) | |
| med (0.116252) | |
| cbl (0.114797) | |
| spc (0.113366) | |
| ldo (0.0970026) |
| Expressed library(ies): 56 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fco (1.8865) | |
| ret (1.41607) | |
| mgp (1.38408) | |
| spl (1.28866) | |
| tbr (1.23343) | |
| lin (1.16482) | |
| thg (1.14112) | |
| liv (0.877706) | |
| fcc (0.791139) | |
| kid (0.778412) | |
| fty (0.703359) | |
| bfe (0.599431) | |
| aor (0.585823) | |
| fce (0.543183) | |
| mgm (0.541028) | |
| lyg (0.532411) | |
| rec (0.519211) | |
| nco (0.485201) | |
| fat (0.442282) | |
| ski (0.440205) | |
| lnt (0.426925) | |
| cty (0.41632) | |
| nca (0.410621) | |
| ste (0.405625) | |
| ese (0.379507) | |
| tra (0.369276) | |
| gul (0.355177) | |
| sin (0.349895) | |
| jca (0.34188) | |
| nje (0.33184) | |
| mga (0.32041) | |
| lun (0.300978) | |
| isp (0.300752) | |
| ova (0.258264) | |
| sug (0.254582) | |
| bla (0.248694) | |
| cbe (0.239234) | |
| ecc (0.23007) | |
| mas (0.210305) | |
| tes (0.207814) | |
| eje (0.197668) | |
| col (0.195008) | |
| nep (0.183925) | |
| sag (0.182715) | |
| ton (0.1755) | |
| fbs (0.175346) | |
| mcp (0.170648) | |
| cut (0.169924) | |
| csp (0.161186) | |
| nmm (0.132802) | |
| ute (0.132784) | |
| pgl (0.118483) | |
| med (0.116252) | |
| cbl (0.114797) | |
| spc (0.113366) | |
| ldo (0.0970026) |