Ss1.1-Lym2-sn08_B01.f.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTCTCCTTCCTTTCACGTTGGGTAGCTCCGAGACCTGTTTAAAAAAATGGAACCTCGTTC CTGTGACACTTTTGTGGCATTACCTCCAACAACAGTTGATAATAGGATTATTTTTGGAAA AAATTCTGATAGACCTTGTGATGAAGTACAAGAAGTAGTTTATTTTCCTGCAGCAGTTCA TGACAACCTGAAAGAACATCTTAAGTGTACTTACATAGAAATTGATCAAGTTCCTGAAAC ATATGCTGTTGTTCTTAGTCGTCCAGCTTGGTTATGGGGAGCAGAAATGGGAGCCAATGA GCATGGAGTTTGCATTGGGAATGAAGCTGTATGGGGAAGAGAAGAAGTTTGTGATGAAGA GGCACTACTGGGCATGGACCTTGTCAGACTTGGCCTTGAAAGAGCTGATACAGCTGAAAA AGCCCTCAATGTCATTGTTGATTTATTAGAAAAATATGGCCAGGGTGGAAATTGTTCAGA GGGTAGGATGGTATTTAGCTATCACAACAGTTTCCTGATAGCTGATAGGAATGAAGCCTG GATTCTGGAGACTGCAGGGAAGTACTGGGCAGCAGAAAAAGTACAAGAGGGAGTTCGTAA TATTTCTAATCAGCTTTCTATAACAACCAAGATTGATCGGGAGCACCCAGACATGAGAAA CTATGCTAAGCAGAAAGGCTGGTGGGATGGTAAAAAAGAGTTTGATTTTGCTGCAACATA CTCTTATCTCGACACAGCCAAGATGATGACTTCATCAGGCAGATATTGTGAAGGCTACAA GCTTCTGAATAAACATAAAGGAGGACATCTGGAAAAATCCTGAAGTACTTGGAAATTGTA CAACATACTTTAAATCTATGGGTCAAAAAAGAAGTCTCAAGGAAATGAGAAGATATTTTA AGTGGAGTAAAATGAAAATCAGTGTACCAAAATTTATGAGATGCAGCAAAAGTTGTGCTT ACAGGGAATTTTGTAGCATCACCTGCTTGTATTAGACAATAAGAAAGGACTCAACAATGT AAACTTTCACCTTAATAAATTTTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTCTCCTTCCTTTCACGTTGGGTAGCTCCGAGACCTGTTTAAAAAAATGGAACCTCGTTC CTGTGACACTTTTGTGGCATTACCTCCAACAACAGTTGATAATAGGATTATTTTTGGAAA AAATTCTGATAGACCTTGTGATGAAGTACAAGAAGTAGTTTATTTTCCTGCAGCAGTTCA TGACAACCTGAAAGAACATCTTAAGTGTACTTACATAGAAATTGATCAAGTTCCTGAAAC ATATGCTGTTGTTCTTAGTCGTCCAGCTTGGTTATGGGGAGCAGAAATGGGAGCCAATGA GCATGGAGTTTGCATTGGGAATGAAGCTGTATGGGGAAGAGAAGAAGTTTGTGATGAAGA GGCACTACTGGGCATGGACCTTGTCAGACTTGGCCTTGAAAGAGCTGATACAGCTGAAAA AGCCCTCAATGTCATTGTTGATTTATTAGAAAAATATGGCCAGGGTGGAAATTGTTCAGA GGGTAGGATGGTATTTAGCTATCACAACAGTTTCCTGATAGCTGATAGGAATGAAGCCTG GATTCTGGAGACTGCAGGGAAGTACTGGGCAGCAGAAAAAGTACAAGAGGGAGTTCGTAA TATTTCTAATCAGCTTTCTATAACAACCAAGATTGATCGGGAGCACCCAGACATGAGAAA CTATGCTAAGCAGAAAGGCTGGTGGGATGGTAAAAAAGAGTTTGATTTTGCTGCAACATA CTCTTATCTCGACACAGCCAAGATGATGACTTCATCAGGCAGATATTGTGAAGGCTACAA GCTTCTGAATAAACATAAAGGAGGACATCTGGAAAAATCCTGAAGTACTTGGAAATTGTA CAACATACTTTAAATCTATGGGTCAAAAAAGAAGTCTCAAGGAAATGAGAAGATATTTTA AGTGGAGTAAAATGAAAATCAGTGTACCAAAATTTATGAGATGCAGCAAAAGTTGTGCTT ACAGGGAATTTTGTAGCATCACCTGCTTGTATTAGACAATAAGAAAGGACTCAACAATGT AAACTTTCACCTTAATAAATTTTT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
| 41-205, gnl|bosTau2|chr2 (14429893-14430057) | |
| 41-205, gnl|Hg17|chr2 (175088515-175088677) | |
| 41-205, gnl|Mm7|chr2 (73159144-73159308) | |
| 386-623, gnl|bosTau2|chr2 (14433591-14433828) | |
| 386-623, gnl|canFam2|chr36 (21485578-21485809) | |
| 386-623, gnl|danRer3|chr21 (32983592-32983372) | |
| 386-623, gnl|dasNov1|scaffold_6400 (6237-6005) | |
| 386-623, gnl|echTel1|scaffold_279297 (85998-86230) | |
| 386-623, gnl|fr1|chrUn (265059861-265060069) | |
| 386-623, gnl|galGal2|chrUn (153026950-153026720) | |
| 386-623, gnl|hg17|chr2 (175091202-175091432) | |
| 386-623, gnl|loxAfr1|scaffold_39528 (8271-8036) | |
| 386-623, gnl|mm7|chr2 (73162995-73163223) | |
| 386-623, gnl|monDom2|scaffold_2 (73975072-73975297) | |
| 386-623, gnl|panTro1|chr13 (64728585-64728793) | |
| 386-623, gnl|rheMac2|chr12 (38024188-38024418) | |
| 386-623, gnl|rn3|chr3 (55720785-55721013) | |
| 386-623, gnl|tetNig1|chr2 (11250464-11250256) | |
| 386-623, gnl|xenTro1|scaffold_65 (702592-702367) | |
| 795-1042, gnl|bosTau2|chr18 (6061699-6061446) | |
| 796-1040, gnl|bosTau2|chr15 (48284360-48284611) | |
| 796-1040, gnl|canFam2|chr18 (46059795-46059166) | |
| 796-1040, gnl|hg17|chr11 (46426413-46427091) | |
| 796-1040, gnl|Hg17|chr11 (46426419-46426681) | |
| 796-1040, gnl|panTro1|chr9 (46937273-46937951) | |
| 796-1040, gnl|rheMac2|chr14 (25676591-25675924) | |
| 801-1039, gnl|bosTau2|chr10 (9945188-9944950) |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 41-205, gnl|bosTau2|chr2 (14429893-14430057) | |
| 41-205, gnl|Hg17|chr2 (175088515-175088677) | |
| 41-205, gnl|Mm7|chr2 (73159144-73159308) | |
| 386-623, gnl|bosTau2|chr2 (14433591-14433828) | |
| 386-623, gnl|canFam2|chr36 (21485578-21485809) | |
| 386-623, gnl|danRer3|chr21 (32983592-32983372) | |
| 386-623, gnl|dasNov1|scaffold_6400 (6237-6005) | |
| 386-623, gnl|echTel1|scaffold_279297 (85998-86230) | |
| 386-623, gnl|fr1|chrUn (265059861-265060069) | |
| 386-623, gnl|galGal2|chrUn (153026950-153026720) | |
| 386-623, gnl|hg17|chr2 (175091202-175091432) | |
| 386-623, gnl|loxAfr1|scaffold_39528 (8271-8036) | |
| 386-623, gnl|mm7|chr2 (73162995-73163223) | |
| 386-623, gnl|monDom2|scaffold_2 (73975072-73975297) | |
| 386-623, gnl|panTro1|chr13 (64728585-64728793) | |
| 386-623, gnl|rheMac2|chr12 (38024188-38024418) | |
| 386-623, gnl|rn3|chr3 (55720785-55721013) | |
| 386-623, gnl|tetNig1|chr2 (11250464-11250256) | |
| 386-623, gnl|xenTro1|scaffold_65 (702592-702367) | |
| 795-1042, gnl|bosTau2|chr18 (6061699-6061446) | |
| 796-1040, gnl|bosTau2|chr15 (48284360-48284611) | |
| 796-1040, gnl|canFam2|chr18 (46059795-46059166) | |
| 796-1040, gnl|hg17|chr11 (46426413-46427091) | |
| 796-1040, gnl|Hg17|chr11 (46426419-46426681) | |
| 796-1040, gnl|panTro1|chr9 (46937273-46937951) | |
| 796-1040, gnl|rheMac2|chr14 (25676591-25675924) | |
| 801-1039, gnl|bosTau2|chr10 (9945188-9944950) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| sug (0.127291) |