Non-Coding RNA Search

Ss1.1-Lym2-sn56_C06.f.5

Sequence:


               
               CTAGTCCCGAAAGGGAATTCAAGCAATGGAAATAGTGGCTCTAACAGCAGCAAAACTGTT
AAAGAAAATGACAAAGAAAAAGGGAAAGAGAAAGAAAAAGAGAAAAAAGAAAAGACTCCA
GCTACTACTCCAGAGGCCAGAGTACTTGGTAAAGATGGTAAAGAAAAACCGAAGGAAGAA
CGACCAAATAAAGATGAAAAAGCAAGAGAAACGAAGGAAAGAACACCTAAGTCTGACAAA
GAGAAAGAAAAATTCAAGAAGGAAGAAAAGGCTAAAGATGAGAAATTCAAGACCACTGTA
CCCAACGTAGAATCAAAGTCGACACAAGAAAAGGAAAGGGAGAAGGAACCATCCAGAGAA
AGAGATATAGCAAAGGAAATGAAATCAAAGGAAAATGTTAAAGGAGGAGAGAAAACACCA
GTTTCTGGGTCCTTGAAGTCACCTGTTCCCCGATCAGATATTGCAGAGCCTGAAAGGGAA
CAGAAACGTCGTAAAATTGATACCCACCCTTCTCCATCACATTCCTCAACAGTAAAGGTT
ACAGCCATACTTCCCAAAGTTCCTCTGGGTTCTGAGAACTATGCCAGCACTCCTCCACCA
TCCATTCATTTTCTACAGGACAATCTCATCGAACTCAAGGAGTCTTCAGCAAAGCTCTAC
ATTAATCATACTCCTCCACCACTGTCCAAGAGTAAGGAGAGAGAAATGGACAAGAAAGAT
TTGGACAAGTCGAGGGAAAGATCCAGAGAAAGAGAAAAAAAAGATGAAAAGGACAGGAAG
GAACGGAAAAGGGATCACTCAAACAATGACCGAGAAGTGCCACCGGACTTAACCAAGAGG
CGGAAAGAGGAAAATGGAACAATGGGGGTTTCAAAACACAAAAGTGAAAGCCCATGTGAG
TCTCCATATCCAAATGAGAAAGAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTAGTCCCGAAAGGGAATTCAAGCAATGGAAATAGTGGCTCTAACAGCAGCAAAACTGTT
AAAGAAAATGACAAAGAAAAAGGGAAAGAGAAAGAAAAAGAGAAAAAAGAAAAGACTCCA
GCTACTACTCCAGAGGCCAGAGTACTTGGTAAAGATGGTAAAGAAAAACCGAAGGAAGAA
CGACCAAATAAAGATGAAAAAGCAAGAGAAACGAAGGAAAGAACACCTAAGTCTGACAAA
GAGAAAGAAAAATTCAAGAAGGAAGAAAAGGCTAAAGATGAGAAATTCAAGACCACTGTA
CCCAACGTAGAATCAAAGTCGACACAAGAAAAGGAAAGGGAGAAGGAACCATCCAGAGAA
AGAGATATAGCAAAGGAAATGAAATCAAAGGAAAATGTTAAAGGAGGAGAGAAAACACCA
GTTTCTGGGTCCTTGAAGTCACCTGTTCCCCGATCAGATATTGCAGAGCCTGAAAGGGAA
CAGAAACGTCGTAAAATTGATACCCACCCTTCTCCATCACATTCCTCAACAGTAAAGGTT
ACAGCCATACTTCCCAAAGTTCCTCTGGGTTCTGAGAACTATGCCAGCACTCCTCCACCA
TCCATTCATTTTCTACAGGACAATCTCATCGAACTCAAGGAGTCTTCAGCAAAGCTCTAC
ATTAATCATACTCCTCCACCACTGTCCAAGAGTAAGGAGAGAGAAATGGACAAGAAAGAT
TTGGACAAGTCGAGGGAAAGATCCAGAGAAAGAGAAAAAAAAGATGAAAAGGACAGGAAG
GAACGGAAAAGGGATCACTCAAACAATGACCGAGAAGTGCCACCGGACTTAACCAAGAGG
CGGAAAGAGGAAAATGGAACAATGGGGGTTTCAAAACACAAAAGTGAAAGCCCATGTGAG
TCTCCATATCCAAATGAGAAAGAC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|26345312|dbj|BAC36307.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|26345312|dbj|BAC36307.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               7-924, gnl|bosTau2|chr1 (72484265-72485173)
               

               
               7-924, gnl|Hg17|chrX (122482184-122472881)
               

               
               7-924, gnl|Mm7|chr5 (103711990-103712820)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-924, gnl|bosTau2|chr1 (72484265-72485173)
               

               
               7-924, gnl|Hg17|chrX (122482184-122472881)
               

               
               7-924, gnl|Mm7|chr5 (103711990-103712820)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               hea (0.204499)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hea (0.204499)

	7-924, gnl\|bosTau2\|chr1 (72484265-72485173)
	7-924, gnl\|Hg17\|chrX (122482184-122472881)
	7-924, gnl\|Mm7\|chr5 (103711990-103712820)