Non-Coding RNA Search

Ss1.1-MPL-MPL384_11_A13.5

Sequence:


               
               AAGATTTGGCATTTTCACGTGCTTTGATATTCTCTTCCATGATCCCGCTGTGACTCTGGT
GAAAGATTTCCAGGTGGACACCATACTCTTCCCGACAGCTTGGATGAATGTTTTGCCACA
TTTGACAGCTATTGAATTCCACTCAGCTTGGGCTATGGGCATGAGAGTCAACTTCCTTGC
AGCCAATATACATTTCCCCTTAAGAAAAATGACAGGAAGTGGCATCTATGCACCTGATTC
TCCAAGAGCATTTCATTATGATATGAAGACAAAGGAGGGAAAACTCCTCCTCTCACAATT
GGACTCCCACCCACACCGCCCAGCAGTGAATTGGACTTCTTATGCCAGTGGTTTACCAGC
CCCCTTAGTGGGAAACCAGGAATTTAAAAGCATTGTCTTTTTTGACGAGTTCACCTTCTT
AGAGCTCAAAGGAGTTGCAGGAAATTACACAGTTTGTCAGAAAGATCTCTGCTGTCAGCT
AAGTTACAGGATGCTTGAGATGAGAGAAGACGAAGTTTATGCACTAGGGGCATTCGATGG
ACTACATACTGTGGAAGGGAGCTATTATTTACAGATTTGTACTTTGTTGAAGTGTAAAAC
AATGGACTTACACTCCTGTGGTGACTCGGTGGAAACTGCTTCCACCAGGTTTGAAATGTT
CTCCCTCAGTGGCACTTTTGGAACCCAGTATGTGTTCCCTGAGGTGTTGCTGAGTGACAT
ACAGCTTGCACCTGGAGAATTTCAGGTGTCAAGTGATGGACGCTTGTTCAGCCTGAAGCC
ACCGTCTGGACCTGTCTTGACTGTCACTCTGTTTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGATTTGGCATTTTCACGTGCTTTGATATTCTCTTCCATGATCCCGCTGTGACTCTGGT
GAAAGATTTCCAGGTGGACACCATACTCTTCCCGACAGCTTGGATGAATGTTTTGCCACA
TTTGACAGCTATTGAATTCCACTCAGCTTGGGCTATGGGCATGAGAGTCAACTTCCTTGC
AGCCAATATACATTTCCCCTTAAGAAAAATGACAGGAAGTGGCATCTATGCACCTGATTC
TCCAAGAGCATTTCATTATGATATGAAGACAAAGGAGGGAAAACTCCTCCTCTCACAATT
GGACTCCCACCCACACCGCCCAGCAGTGAATTGGACTTCTTATGCCAGTGGTTTACCAGC
CCCCTTAGTGGGAAACCAGGAATTTAAAAGCATTGTCTTTTTTGACGAGTTCACCTTCTT
AGAGCTCAAAGGAGTTGCAGGAAATTACACAGTTTGTCAGAAAGATCTCTGCTGTCAGCT
AAGTTACAGGATGCTTGAGATGAGAGAAGACGAAGTTTATGCACTAGGGGCATTCGATGG
ACTACATACTGTGGAAGGGAGCTATTATTTACAGATTTGTACTTTGTTGAAGTGTAAAAC
AATGGACTTACACTCCTGTGGTGACTCGGTGGAAACTGCTTCCACCAGGTTTGAAATGTT
CTCCCTCAGTGGCACTTTTGGAACCCAGTATGTGTTCCCTGAGGTGTTGCTGAGTGACAT
ACAGCTTGCACCTGGAGAATTTCAGGTGTCAAGTGATGGACGCTTGTTCAGCCTGAAGCC
ACCGTCTGGACCTGTCTTGACTGTCACTCTGTTTGG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|47523070|ref|NP_999298.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|47523070|ref|NP_999298.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               213-574, gnl|bosTau2|chr9 (40946568-40946204)
               

               
               213-574, gnl|Hg17|chr6 (133055419-133055055)
               

               
               213-574, gnl|Mm7|chr10 (23651509-23651870)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               213-574, gnl|bosTau2|chr9 (40946568-40946204)
               

               
               213-574, gnl|Hg17|chr6 (133055419-133055055)
               

               
               213-574, gnl|Mm7|chr10 (23651509-23651870)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cbl (0.114797)
               

               
               jej (0.0989218)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.114797)
               

               
               jej (0.0989218)

	213-574, gnl\|bosTau2\|chr9 (40946568-40946204)
	213-574, gnl\|Hg17\|chr6 (133055419-133055055)
	213-574, gnl\|Mm7\|chr10 (23651509-23651870)