Non-Coding RNA Search

Ss1.1-MPL-MPL384_12_J18.5

Sequence:


               
               TGTCAGCAAAAATGTTAAGTTTTACTAGGTAAGCAGAAAAAAAATAAATCTCAAATGCAG
TGCTATTTACTCTTTTCAAAACAGTTTTCATTTTAAAGCACATTATATGTTTCTATAGAA
CCTGCATTTATTCTTGCATGCTAAGGATGGTACTTGAATTTGGTGAATTACTATTGACAG
TTTCCACAGAAATCTTGTTTCAGTGGACCAACATTGTGGCATGGCAGCAAATGCCAGCAT
TTTGGGGAATAGCAGCAAATCTACAAGAGACCCTGGTTGTTTTTGTTTTTGTTTTTAATT
TGTTTTTTGTTTGTTTCTTAATCAGCAGGGATGGAAGGGGAATAGGGAAGTTATGAATTA
CTCCTTCCTGTAGTAGCTCTGAAGTGTCACATTCAATATCAATTAAAAAAAAAAACCATG
ATTCTAGTTAAGTGTAGAAGAGAGAAAGAAAAAAGTGTTCACTTTTTTAATACACTGATT
TAGAAATTTGATGTCTTATATCAATAGTTCTGAAGTATTAAATAGCATTCTTTATTTCTG
CCTTTACGTTGACAGTGTTGAAGCAGGGTGAATAACTAGGGCATATATATTTTTTTTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTCAGCAAAAATGTTAAGTTTTACTAGGTAAGCAGAAAAAAAATAAATCTCAAATGCAG
TGCTATTTACTCTTTTCAAAACAGTTTTCATTTTAAAGCACATTATATGTTTCTATAGAA
CCTGCATTTATTCTTGCATGCTAAGGATGGTACTTGAATTTGGTGAATTACTATTGACAG
TTTCCACAGAAATCTTGTTTCAGTGGACCAACATTGTGGCATGGCAGCAAATGCCAGCAT
TTTGGGGAATAGCAGCAAATCTACAAGAGACCCTGGTTGTTTTTGTTTTTGTTTTTAATT
TGTTTTTTGTTTGTTTCTTAATCAGCAGGGATGGAAGGGGAATAGGGAAGTTATGAATTA
CTCCTTCCTGTAGTAGCTCTGAAGTGTCACATTCAATATCAATTAAAAAAAAAAACCATG
ATTCTAGTTAAGTGTAGAAGAGAGAAAGAAAAAAGTGTTCACTTTTTTAATACACTGATT
TAGAAATTTGATGTCTTATATCAATAGTTCTGAAGTATTAAATAGCATTCTTTATTTCTG
CCTTTACGTTGACAGTGTTGAAGCAGGGTGAATAACTAGGGCATATATATTTTTTTTTTT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               Q9H2I4_HUMAN

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               Q9H2I4_HUMAN

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-598, gnl|bosTau2|chr1 (60320990-60320395)
               

               
               1-598, gnl|Hg17|chr3 (178222446-178221868)
               

               
               1-598, gnl|Mm7|chr3 (21953374-21953916)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-598, gnl|bosTau2|chr1 (60320990-60320395)
               

               
               1-598, gnl|Hg17|chr3 (178222446-178221868)
               

               
               1-598, gnl|Mm7|chr3 (21953374-21953916)

Expressed library(ies): 4 entry(ies)

More info

Expressed library(ies): 4 entry(ies)

Help | Less info


               
               elu (0.385356)
               

               
               gul (0.177588)
               

               
               spl (0.143184)
               

               
               sug (0.127291)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               elu (0.385356)
               

               
               gul (0.177588)
               

               
               spl (0.143184)
               

               
               sug (0.127291)

	1-598, gnl\|bosTau2\|chr1 (60320990-60320395)
	1-598, gnl\|Hg17\|chr3 (178222446-178221868)
	1-598, gnl\|Mm7\|chr3 (21953374-21953916)