Non-Coding RNA Search

Ss1.1-MPL-MPL384_4_P03.5

Sequence:


               
               CACCAGCCTGGTATTCGAGCATAGAATTTTAATTTGAGGAACGTTTCTGCAGCCCCTAAA
CACAGACCCATCCTCAGACCAGTCTGAATTTTGAGGTTGAGAATGAAATGCGTGTTCCTT
CTCTGCATTTTCTCAAAAATAGGTATTTTTCAGCCATCTCCTAGTTGAGCCCACCTTTAG
AATGGCATATAAGATCTCCCAGAGTTTTCAGGTGTTCCTTAGAAGCTTCTCAAGCAAGTT
TTGGAAGGCAGACTAATAGCTGTAAAAATATAGACATATATATTATATATAGTTATATAT
ATTTAAAGAGATCTATCTATATATATATACATATAAAATTACTGTACTCTCTGACTCGGG
ACAAAGTATGATTTAAACAGCCCAGCTAGCGTCAGATTTCTAATGCATGAATGTAAATAC
CCTGAGACCTGCCTTCCTAGCGCTGTGTCGCGTGTTCACGGGGAGATAGATGGCTCTTGT
TCCCAGGAGTTCTGTCTCCATGGACAAATAAATGTACATGTCGGGGCCATCCTGGCCCCC
TCCGCGAGCCACCGATGTTGACTTTGTGCTGAGATGTCGCGCAGGGAGCAGGGCTGGCGG
CGGCGGGGGTAGGCTCCATGCCCTTGCGAGGAAGAAAGCACCAGGCCTTTTTTATTTTCA
ATAAAAAATGTACTTATGCCAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACCAGCCTGGTATTCGAGCATAGAATTTTAATTTGAGGAACGTTTCTGCAGCCCCTAAA
CACAGACCCATCCTCAGACCAGTCTGAATTTTGAGGTTGAGAATGAAATGCGTGTTCCTT
CTCTGCATTTTCTCAAAAATAGGTATTTTTCAGCCATCTCCTAGTTGAGCCCACCTTTAG
AATGGCATATAAGATCTCCCAGAGTTTTCAGGTGTTCCTTAGAAGCTTCTCAAGCAAGTT
TTGGAAGGCAGACTAATAGCTGTAAAAATATAGACATATATATTATATATAGTTATATAT
ATTTAAAGAGATCTATCTATATATATATACATATAAAATTACTGTACTCTCTGACTCGGG
ACAAAGTATGATTTAAACAGCCCAGCTAGCGTCAGATTTCTAATGCATGAATGTAAATAC
CCTGAGACCTGCCTTCCTAGCGCTGTGTCGCGTGTTCACGGGGAGATAGATGGCTCTTGT
TCCCAGGAGTTCTGTCTCCATGGACAAATAAATGTACATGTCGGGGCCATCCTGGCCCCC
TCCGCGAGCCACCGATGTTGACTTTGTGCTGAGATGTCGCGCAGGGAGCAGGGCTGGCGG
CGGCGGGGGTAGGCTCCATGCCCTTGCGAGGAAGAAAGCACCAGGCCTTTTTTATTTTCA
ATAAAAAATGTACTTATGCCAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               3-678, gnl|bosTau2|chr21 (37771813-37772475)
               

               
               3-678, gnl|Hg17|chr14 (93255060-93254405)
               

               
               3-678, gnl|Mm7|chr12 (100690673-100690118)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-678, gnl|bosTau2|chr21 (37771813-37772475)
               

               
               3-678, gnl|Hg17|chr14 (93255060-93254405)
               

               
               3-678, gnl|Mm7|chr12 (100690673-100690118)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               fce (0.271592)
               

               
               pty (0.142714)
               

               
               cov (0.132153)
               

               
               clu (0.119646)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)
               

               
               pty (0.142714)
               

               
               cov (0.132153)
               

               
               clu (0.119646)

	3-678, gnl\|bosTau2\|chr21 (37771813-37772475)
	3-678, gnl\|Hg17\|chr14 (93255060-93254405)
	3-678, gnl\|Mm7\|chr12 (100690673-100690118)