Non-Coding RNA Search

Ss1.1-MPL-mpl384-7_x15_A23.3

Sequence:


               
               ACAGGTTGAATGCCACTGCAAAGAAGATCAGTGATGGCATAAAAAGATTTCTAGACTAGT
TGATGGTCCATTTGTTTCAAATAATAGCTGGTTAACAAATTCCAGAATGTGTTTTTCGTC
TGGAATTGCACAGAGCTTGGGAAATTTGTGTCGAGTATCATAATAGATAATGGAAAATAC
GAGGGGAAATAGACATTGCAAATGTTAAGGATGGTGGTTATTTGCAAGAATAAGAGCTTC
TCCAGCCCCCTAAACACCGGGAGATGGGAAAGGCTGGAGCTATCCTTCTTGCTCTCAGGA
TCTTGTGGCTTCTATTAATCCCTACCAGGAAATGTGCTCACCCAGAGAAGGGGTATAAAG
TGAATTGGACTTATTTGGAGTGAGACAGGATTTCCCAGGGTTATGAGTCTCCAACCTCAG
TTTAAGCTACTCTGATGGCAGTTCAGGATCACAGGTCTGATCCTAGTGTACCCCAGCTAG
TGATAGTAACTGGAAGATATTGTGCTTGAAGGCAGCAGCATAGAGGCCTGTTGTTTATAG
GGAAAAGGTTTGGGAAGGACTGTTAAAATGTCAGCCTAAAGCCAAGGTCCCTCCTGAGGC
CTTGGGCTGTGTATTATGAGTGATGGTATCTTTTACGTGAACTATTCATCAGCAATTAAA
ATAATTCATAACATTGCTTAAGTCAGATCCAGAGGCCTTTCCTATTATTGGTCTTTCTCT
CAGGGAAAGTTCTGCTCTGTCTCCTCCTTGGGGATGTTTTGGGGACAATGCTTCACTATT
AAAGATCACATATCCTTGCCCAGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACAGGTTGAATGCCACTGCAAAGAAGATCAGTGATGGCATAAAAAGATTTCTAGACTAGT
TGATGGTCCATTTGTTTCAAATAATAGCTGGTTAACAAATTCCAGAATGTGTTTTTCGTC
TGGAATTGCACAGAGCTTGGGAAATTTGTGTCGAGTATCATAATAGATAATGGAAAATAC
GAGGGGAAATAGACATTGCAAATGTTAAGGATGGTGGTTATTTGCAAGAATAAGAGCTTC
TCCAGCCCCCTAAACACCGGGAGATGGGAAAGGCTGGAGCTATCCTTCTTGCTCTCAGGA
TCTTGTGGCTTCTATTAATCCCTACCAGGAAATGTGCTCACCCAGAGAAGGGGTATAAAG
TGAATTGGACTTATTTGGAGTGAGACAGGATTTCCCAGGGTTATGAGTCTCCAACCTCAG
TTTAAGCTACTCTGATGGCAGTTCAGGATCACAGGTCTGATCCTAGTGTACCCCAGCTAG
TGATAGTAACTGGAAGATATTGTGCTTGAAGGCAGCAGCATAGAGGCCTGTTGTTTATAG
GGAAAAGGTTTGGGAAGGACTGTTAAAATGTCAGCCTAAAGCCAAGGTCCCTCCTGAGGC
CTTGGGCTGTGTATTATGAGTGATGGTATCTTTTACGTGAACTATTCATCAGCAATTAAA
ATAATTCATAACATTGCTTAAGTCAGATCCAGAGGCCTTTCCTATTATTGGTCTTTCTCT
CAGGGAAAGTTCTGCTCTGTCTCCTCCTTGGGGATGTTTTGGGGACAATGCTTCACTATT
AAAGATCACATATCCTTGCCCAGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-804, gnl|bosTau2|chr5 (34335559-34336342)
               

               
               1-804, gnl|Hg17|chr12 (56439752-56440587)
               

               
               1-804, gnl|Mm7|chr10 (126553234-126552368)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-804, gnl|bosTau2|chr5 (34335559-34336342)
               

               
               1-804, gnl|Hg17|chr12 (56439752-56440587)
               

               
               1-804, gnl|Mm7|chr10 (126553234-126552368)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ece (0.229305)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)

	1-804, gnl\|bosTau2\|chr5 (34335559-34336342)
	1-804, gnl\|Hg17\|chr12 (56439752-56440587)
	1-804, gnl\|Mm7\|chr10 (126553234-126552368)