Non-Coding RNA Search

Ss1.1-Mixc-0025b17.3

Sequence:


               
               ACCTTCACGCCCTTCTCATGCTTACCCCCTTGTCTCTGCAGCTCAATGAGTTCAATCTCA
TGGGGGACACGCTGGCCTCTGTGATGGGTGAGTGTGTCTCAGGCTGGTCAAGCCCACCCT
ACTCCCCTAGGTTCTGTGCAGGTTAACCTCAGCCCAGCCCCACTGCCTTCACCCCAGGGT
TGTAGACAGCAAAGAAGATAACCAGGAGACAGTGGTCTCTTTGGCCTAGGCCCTTCATCC
CTCTTGCTTTGCCTTGGTCACAGCAATGCTCGGCTGCTGTCTAGTTTCCTGGTATCTCCC
TACCAAGTCTTAGGTTCCTCGGGCCAGCCCCAAGTTCTCGGAGGGTGATAATGGAAGGTG
CAAGTCAGATTGGTTTCACTCCTCATGGGTTATCACATTCTCATTTGGAGCCAGGAGGAA
GCTGGGATGCGGAAATGAGAGACATTTATGGAGGTGGGGGCCAAGCAAGGGCTTGGAGCC
ATATGAGAACAAGTTCTTCGAGAAGAGGCGGCTTTGTGTTGAAGGGCCAAAGGTATCCAA
GTGTTAGGGCTGAAGCAGGGGCACTGGGACTGGAACACTGGCATGTACTGCTCTGGACTT
AGCTCCAGAAACTTCTCCAGAGTTGGCGACCCAGCTGCTCTGAGGGTCCCTGTTGTATCT
AGCCTGGAGCCAAGCTCCTGGAGCCAAGCTTCTCTTTTTCTTCTCTGACACGCAGTGCCA
GAGGGTCAGGTAGTAGTTTTTGATGTGTGCTCACTATTCACATGGCCAATAAAACCATAC
CCAACTGAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCTTCACGCCCTTCTCATGCTTACCCCCTTGTCTCTGCAGCTCAATGAGTTCAATCTCA
TGGGGGACACGCTGGCCTCTGTGATGGGTGAGTGTGTCTCAGGCTGGTCAAGCCCACCCT
ACTCCCCTAGGTTCTGTGCAGGTTAACCTCAGCCCAGCCCCACTGCCTTCACCCCAGGGT
TGTAGACAGCAAAGAAGATAACCAGGAGACAGTGGTCTCTTTGGCCTAGGCCCTTCATCC
CTCTTGCTTTGCCTTGGTCACAGCAATGCTCGGCTGCTGTCTAGTTTCCTGGTATCTCCC
TACCAAGTCTTAGGTTCCTCGGGCCAGCCCCAAGTTCTCGGAGGGTGATAATGGAAGGTG
CAAGTCAGATTGGTTTCACTCCTCATGGGTTATCACATTCTCATTTGGAGCCAGGAGGAA
GCTGGGATGCGGAAATGAGAGACATTTATGGAGGTGGGGGCCAAGCAAGGGCTTGGAGCC
ATATGAGAACAAGTTCTTCGAGAAGAGGCGGCTTTGTGTTGAAGGGCCAAAGGTATCCAA
GTGTTAGGGCTGAAGCAGGGGCACTGGGACTGGAACACTGGCATGTACTGCTCTGGACTT
AGCTCCAGAAACTTCTCCAGAGTTGGCGACCCAGCTGCTCTGAGGGTCCCTGTTGTATCT
AGCCTGGAGCCAAGCTCCTGGAGCCAAGCTTCTCTTTTTCTTCTCTGACACGCAGTGCCA
GAGGGTCAGGTAGTAGTTTTTGATGTGTGCTCACTATTCACATGGCCAATAAAACCATAC
CCAACTGAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-788, gnl|bosTau2|chr15 (49057873-49057115)
               

               
               1-788, gnl|Hg17|chr11 (47216224-47217344)
               

               
               1-788, gnl|Mm7|chr2 (91063082-91062278)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-788, gnl|bosTau2|chr15 (49057873-49057115)
               

               
               1-788, gnl|Hg17|chr11 (47216224-47217344)
               

               
               1-788, gnl|Mm7|chr2 (91063082-91062278)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               amn (0.417711)
               

               
               eru (0.120048)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               amn (0.417711)
               

               
               eru (0.120048)

	1-788, gnl\|bosTau2\|chr15 (49057873-49057115)
	1-788, gnl\|Hg17\|chr11 (47216224-47217344)
	1-788, gnl\|Mm7\|chr2 (91063082-91062278)