Ss1.1-Mixc-0026,m17.5
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AAGCACCCAGTCCCCAAGACCTTCTCCCTAGCTTTGCCCAAGGCCTAGGGAAACCAAAAA
GTGGCGGGTTTGACACGAGGCCGCTCCTCACCCCCATGCACTTTTTCTGACACGGTTTTC
AGGTCTAAACAGGGGCTGCTCCAGTCCATCACCTCCGTGGTTTGAAGCCACCACCATTGA
ACTTCCCCATGGCGGTTTCAAGATGCTCCTTCTCCCCTCATTCCTTGCACTTTATTCTCT
TGGGTGGTTTCAGACTGCCCTCGTTTTCTCAGTGGCCATTCGTTAGGTCCCTCAGGGGCT
AAATGACTCCAAATCTGGGATCCTTCCCTCTCAGACTCCCCTATTTCCGCTTAGAATTTG
GGGAACGTATATAGGAGAAGTCACAGAATCCCAGGAAAGGGAATGGGGCTGGGGGAAAGG
GGTGTTTTTCCCCAGGCAGGGTTGTGTCTTTGTGTCTCTCTCTGTGACTGTAACTCCTGC
CCTGCCCCCTCCCAATAAAATGCTTTGGTGTACAAAAAAAAAAAAAAA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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AAGCACCCAGTCCCCAAGACCTTCTCCCTAGCTTTGCCCAAGGCCTAGGGAAACCAAAAA
GTGGCGGGTTTGACACGAGGCCGCTCCTCACCCCCATGCACTTTTTCTGACACGGTTTTC
AGGTCTAAACAGGGGCTGCTCCAGTCCATCACCTCCGTGGTTTGAAGCCACCACCATTGA
ACTTCCCCATGGCGGTTTCAAGATGCTCCTTCTCCCCTCATTCCTTGCACTTTATTCTCT
TGGGTGGTTTCAGACTGCCCTCGTTTTCTCAGTGGCCATTCGTTAGGTCCCTCAGGGGCT
AAATGACTCCAAATCTGGGATCCTTCCCTCTCAGACTCCCCTATTTCCGCTTAGAATTTG
GGGAACGTATATAGGAGAAGTCACAGAATCCCAGGAAAGGGAATGGGGCTGGGGGAAAGG
GGTGTTTTTCCCCAGGCAGGGTTGTGTCTTTGTGTCTCTCTCTGTGACTGTAACTCCTGC
CCTGCCCCCTCCCAATAAAATGCTTTGGTGTACAAAAAAAAAAAAAAA
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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316-501, AV590500 Bos taurus brain fetus Bos taurus cDNA clone E1BR012H09
(dbj|AV590500.1|), blast E-value=0, identity=91.75% |
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316-511, BovGen_05107 normal cattle brain Bos taurus cDNA clone
(gb|CO876782.1|), blast E-value=0, identity=91.67% |
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316-514, BovGen_09560 normal cattle brain Bos taurus cDNA clone
(gb|CO881235.1|), blast E-value=0, identity=92.27% |
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316-514, nae06a03.x1 Dog eye eye minus lens and cornea. Unnormalized (nae)
(gb|DN876390.1|), blast E-value=0, identity=88.67% |
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316-514, LB02825.CR_K19 GC_BGC-28 Bos taurus cDNA clone IMAGE (gb|DV912933.1|),
blast E-value=0, identity=92.27% |
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316-514, LB0289.CR_J09 GC_BGC-28 Bos taurus cDNA clone IMAGE (gb|DV915996.1|),
blast E-value=0, identity=92.27% |
PigEST conread start position and end position of sequence similarity to another annotated EST (NCBI dbEST),
transcript identifier and annotation,
blast E-value,
PigEST conread identity to the similar transcript
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316-501, AV590500 Bos taurus brain fetus Bos taurus cDNA clone E1BR012H09
(dbj|AV590500.1|), blast E-value=0, identity=91.75% |
|
316-511, BovGen_05107 normal cattle brain Bos taurus cDNA clone
(gb|CO876782.1|), blast E-value=0, identity=91.67% |
|
316-514, BovGen_09560 normal cattle brain Bos taurus cDNA clone
(gb|CO881235.1|), blast E-value=0, identity=92.27% |
|
316-514, nae06a03.x1 Dog eye eye minus lens and cornea. Unnormalized (nae)
(gb|DN876390.1|), blast E-value=0, identity=88.67% |
|
316-514, LB02825.CR_K19 GC_BGC-28 Bos taurus cDNA clone IMAGE (gb|DV912933.1|),
blast E-value=0, identity=92.27% |
|
316-514, LB0289.CR_J09 GC_BGC-28 Bos taurus cDNA clone IMAGE (gb|DV915996.1|),
blast E-value=0, identity=92.27% |
Human gene identifier and UTR site,
human gene reading direction
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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fcc (0.39557) |
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fce (0.271592) |
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ecc (0.115035) |
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fcc (0.39557) |
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fce (0.271592) |
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ecc (0.115035) |