Ss1.1-Mixc-0026l06.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCAGCGTCGCGCGGCCGGGCGTGGGAGGAGGTCTGAAGTCACGGCGGACCGCCGGCGGC TGGGCGTCTCTGCGGTTCCCCGCGCGCGGCATGGAGGGCACGGCCGTGGCCGTCTGCGAG ATATTGAAATATTTAATAATTCACTGGAAGTGTGAAACAGCAGGAGTATCAAAAGGATCA TTGCCAGAAGGACAGCTAATGATTTCCATAGACGCGTTAAATGCTAAGTACCAGGCAGAT ACTCTTCATTGTGTAACAACTAATTTGGTGCTTCCAGATGTGAGTTATCAGGTGGAATCC ATTGAGGGGGATCAGTCTCAGAATGTGGACCCCCAGGGACAAACACTGCTGCTTTTTCTC TTTGTGGATTTCCACAGCGGATTTCCAGTCCAGCAAATGGAACTCTGGGGAGTCCACACG TTGCTCACAGCTCATCTCAGTGCCGTCCTCGTGGAGAGCCGCAGCAAGGTGCACGAGTCC ATCCAGGTTGCTGTGGACCAGGCCTTGGAGCAGCATCACCAGGCTGCCAAGGCTCATCAG AAACTGCAAGCCTCACTCTCAGTGGCTGTAAATTCCATCATGAGTATCATGACTGCAAGC ACCAGCAGCAACTTCCGAAAGATCTGCCTCCAGACGCTTCAACATATGGAAATTCCCTGG ACCAGGTTGCAGCTGTGTGTTTAACCAATATTCCTGTTGTGTTGGTTTAATCTAATTTAA TAAACCCTTCCCCTAATGAAAAAAAAAAAAAAAAAAAACGCGAGACTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCAGCGTCGCGCGGCCGGGCGTGGGAGGAGGTCTGAAGTCACGGCGGACCGCCGGCGGC TGGGCGTCTCTGCGGTTCCCCGCGCGCGGCATGGAGGGCACGGCCGTGGCCGTCTGCGAG ATATTGAAATATTTAATAATTCACTGGAAGTGTGAAACAGCAGGAGTATCAAAAGGATCA TTGCCAGAAGGACAGCTAATGATTTCCATAGACGCGTTAAATGCTAAGTACCAGGCAGAT ACTCTTCATTGTGTAACAACTAATTTGGTGCTTCCAGATGTGAGTTATCAGGTGGAATCC ATTGAGGGGGATCAGTCTCAGAATGTGGACCCCCAGGGACAAACACTGCTGCTTTTTCTC TTTGTGGATTTCCACAGCGGATTTCCAGTCCAGCAAATGGAACTCTGGGGAGTCCACACG TTGCTCACAGCTCATCTCAGTGCCGTCCTCGTGGAGAGCCGCAGCAAGGTGCACGAGTCC ATCCAGGTTGCTGTGGACCAGGCCTTGGAGCAGCATCACCAGGCTGCCAAGGCTCATCAG AAACTGCAAGCCTCACTCTCAGTGGCTGTAAATTCCATCATGAGTATCATGACTGCAAGC ACCAGCAGCAACTTCCGAAAGATCTGCCTCCAGACGCTTCAACATATGGAAATTCCCTGG ACCAGGTTGCAGCTGTGTGTTTAACCAATATTCCTGTTGTGTTGGTTTAATCTAATTTAA TAAACCCTTCCCCTAATGAAAAAAAAAAAAAAAAAAAACGCGAGACTA |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 119-262, gnl|bosTau2|chr29 (36764031-36763888) | |
| 119-262, gnl|canFam2|chr18 (53637804-53637462) | |
| 119-262, gnl|echTel1|scaffold_290749 (43275-42921) | |
| 119-262, gnl|hg17|chr11 (66272346-66272693) | |
| 119-262, gnl|Hg17|chr11 (66272424-66272564) | |
| 119-262, gnl|loxAfr1|scaffold_134237 (366-9) | |
| 119-262, gnl|mm7|chr19 (4591024-4590708) | |
| 119-262, gnl|Mm7|chr19 (4590950-4590810) | |
| 119-262, gnl|monDom2|scaffold_107 (2280686-2280275) | |
| 119-262, gnl|oryCun1|scaffold_138645 (5837-5509) | |
| 119-262, gnl|panTro1|chr9 (67522924-67523270) | |
| 119-262, gnl|rheMac2|chr14 (7708589-7708236) | |
| 119-262, gnl|rn3|chr1 (207456064-207455746) | |
| 264-410, gnl|bosTau2|chr29 (36703483-36703334) | |
| 264-410, gnl|canFam2|chr18 (53564001-53563642) | |
| 264-410, gnl|dasNov1|scaffold_30205 (13916-13575) | |
| 264-410, gnl|echTel1|scaffold_292906 (878-326) | |
| 264-410, gnl|hg17|chr11 (66339902-66340274) | |
| 264-410, gnl|Hg17|chr11 (66340101-66340247) | |
| 264-410, gnl|mm7|chr19 (4544799-4544453) | |
| 264-410, gnl|Mm7|chr19 (4544624-4544478) | |
| 264-410, gnl|monDom2|scaffold_107 (2221881-2221490) | |
| 264-410, gnl|oryCun1|scaffold_111213 (5718-6089) | |
| 264-410, gnl|panTro1|chr9 (67591164-67591536) | |
| 264-410, gnl|rheMac2|chr14 (7643360-7642988) | |
| 264-410, gnl|rn3|chr1 (207394367-207394021) | |
| 527-641, gnl|bosTau2|chr29 (36697237-36697123) | |
| 527-641, gnl|canFam2|chr18 (53558718-53558525) | |
| 527-641, gnl|dasNov1|scaffold_30205 (7797-7598) | |
| 527-641, gnl|echTel1|scaffold_295360 (42020-42195) | |
| 527-641, gnl|hg17|chr11 (66346546-66346733) | |
| 527-641, gnl|Hg17|chr11 (66346606-66346720) | |
| 527-641, gnl|loxAfr1|scaffold_84509 (5368-5565) | |
| 527-641, gnl|mm7|chr19 (4537085-4536909) | |
| 527-641, gnl|Mm7|chr19 (4537033-4536920) | |
| 527-641, gnl|oryCun1|scaffold_111213 (13884-14072) | |
| 527-641, gnl|panTro1|chr9 (67597843-67598030) | |
| 527-641, gnl|rheMac2|chr14 (7636703-7636516) | |
| 527-641, gnl|rn3|chr1 (207385535-207385362) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 119-262, gnl|bosTau2|chr29 (36764031-36763888) | |
| 119-262, gnl|canFam2|chr18 (53637804-53637462) | |
| 119-262, gnl|echTel1|scaffold_290749 (43275-42921) | |
| 119-262, gnl|hg17|chr11 (66272346-66272693) | |
| 119-262, gnl|Hg17|chr11 (66272424-66272564) | |
| 119-262, gnl|loxAfr1|scaffold_134237 (366-9) | |
| 119-262, gnl|mm7|chr19 (4591024-4590708) | |
| 119-262, gnl|Mm7|chr19 (4590950-4590810) | |
| 119-262, gnl|monDom2|scaffold_107 (2280686-2280275) | |
| 119-262, gnl|oryCun1|scaffold_138645 (5837-5509) | |
| 119-262, gnl|panTro1|chr9 (67522924-67523270) | |
| 119-262, gnl|rheMac2|chr14 (7708589-7708236) | |
| 119-262, gnl|rn3|chr1 (207456064-207455746) | |
| 264-410, gnl|bosTau2|chr29 (36703483-36703334) | |
| 264-410, gnl|canFam2|chr18 (53564001-53563642) | |
| 264-410, gnl|dasNov1|scaffold_30205 (13916-13575) | |
| 264-410, gnl|echTel1|scaffold_292906 (878-326) | |
| 264-410, gnl|hg17|chr11 (66339902-66340274) | |
| 264-410, gnl|Hg17|chr11 (66340101-66340247) | |
| 264-410, gnl|mm7|chr19 (4544799-4544453) | |
| 264-410, gnl|Mm7|chr19 (4544624-4544478) | |
| 264-410, gnl|monDom2|scaffold_107 (2221881-2221490) | |
| 264-410, gnl|oryCun1|scaffold_111213 (5718-6089) | |
| 264-410, gnl|panTro1|chr9 (67591164-67591536) | |
| 264-410, gnl|rheMac2|chr14 (7643360-7642988) | |
| 264-410, gnl|rn3|chr1 (207394367-207394021) | |
| 527-641, gnl|bosTau2|chr29 (36697237-36697123) | |
| 527-641, gnl|canFam2|chr18 (53558718-53558525) | |
| 527-641, gnl|dasNov1|scaffold_30205 (7797-7598) | |
| 527-641, gnl|echTel1|scaffold_295360 (42020-42195) | |
| 527-641, gnl|hg17|chr11 (66346546-66346733) | |
| 527-641, gnl|Hg17|chr11 (66346606-66346720) | |
| 527-641, gnl|loxAfr1|scaffold_84509 (5368-5565) | |
| 527-641, gnl|mm7|chr19 (4537085-4536909) | |
| 527-641, gnl|Mm7|chr19 (4537033-4536920) | |
| 527-641, gnl|oryCun1|scaffold_111213 (13884-14072) | |
| 527-641, gnl|panTro1|chr9 (67597843-67598030) | |
| 527-641, gnl|rheMac2|chr14 (7636703-7636516) | |
| 527-641, gnl|rn3|chr1 (207385535-207385362) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cbe (0.239234) |