Non-Coding RNA Search

Ss1.1-Mixc-0027h17.3

Sequence:


               
               GATCAAAGACATTATAAGAAAAAAAACACTTTACAACAATGTCTTCATTGTTAATATCTG
TAGTTAAGGTAGCCATTCTTTTTACATGAAATAATGAGAATTTCTGTATTTCTTCATTTC
ACTTTTCTAGTTTGTTTCTTTTCTAATATACTACCCATAATAAATTAAATCTAGAAATCT
GTCCACTTACCTGGATTTCCATTCTGTTCAAGCCATTTTTGCCTTTAAGTACTTTCATCA
CTTTGGAATCACTGCATTGCATGCTATTCCAAAGTTCTGTGTAGCTGGATTGTGCTAGCT
ACTCTTAAAATTATAAAGAATGCCCCAAATGTTATTTTGCTTGTCTGAAACAAGAAGGCA
TTAAAGTACATCTTTATATCCATTCTACTTAGGAACTACTGACTTCCATTAACCACATTT
CATTATAGCAGCTATATCTGTTATGATGCTATGTAAAACTTACAATGTCCTTTTTATGCA
AATGACATTTTTACTTATGTATCAAATTGTTTATCTAGTTTTTATAATATGGTTTAAAAG
ATTCTTTCTAAGATGACATTATATAACCTTTACTTAAAGAATGTGTCTAGGTTACTGCTT
ATAAAAGACCTTGTAATTAAGTCAAATTATATAGCAGATTCCAAGTGATCATTAAATGTT
ACTTCTAAAATTTGAAACAGAGTGAAATAGAAGGTTCTGTCAGGAGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATCAAAGACATTATAAGAAAAAAAACACTTTACAACAATGTCTTCATTGTTAATATCTG
TAGTTAAGGTAGCCATTCTTTTTACATGAAATAATGAGAATTTCTGTATTTCTTCATTTC
ACTTTTCTAGTTTGTTTCTTTTCTAATATACTACCCATAATAAATTAAATCTAGAAATCT
GTCCACTTACCTGGATTTCCATTCTGTTCAAGCCATTTTTGCCTTTAAGTACTTTCATCA
CTTTGGAATCACTGCATTGCATGCTATTCCAAAGTTCTGTGTAGCTGGATTGTGCTAGCT
ACTCTTAAAATTATAAAGAATGCCCCAAATGTTATTTTGCTTGTCTGAAACAAGAAGGCA
TTAAAGTACATCTTTATATCCATTCTACTTAGGAACTACTGACTTCCATTAACCACATTT
CATTATAGCAGCTATATCTGTTATGATGCTATGTAAAACTTACAATGTCCTTTTTATGCA
AATGACATTTTTACTTATGTATCAAATTGTTTATCTAGTTTTTATAATATGGTTTAAAAG
ATTCTTTCTAAGATGACATTATATAACCTTTACTTAAAGAATGTGTCTAGGTTACTGCTT
ATAAAAGACCTTGTAATTAAGTCAAATTATATAGCAGATTCCAAGTGATCATTAAATGTT
ACTTCTAAAATTTGAAACAGAGTGAAATAGAAGGTTCTGTCAGGAGAG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               2-461, gnl|bosTau2|chr20 (8767680-8768135)
               

               
               2-461, gnl|Hg17|chr5 (64998486-64998006)
               

               
               2-461, gnl|Mm7|chr13 (101279292-101279710)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-461, gnl|bosTau2|chr20 (8767680-8768135)
               

               
               2-461, gnl|Hg17|chr5 (64998486-64998006)
               

               
               2-461, gnl|Mm7|chr13 (101279292-101279710)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

Help | Less info


               
               fco (0.157208)
               

               
               liv (0.146284)
               

               
               tra (0.123092)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.157208)
               

               
               liv (0.146284)
               

               
               tra (0.123092)

	2-461, gnl\|bosTau2\|chr20 (8767680-8768135)
	2-461, gnl\|Hg17\|chr5 (64998486-64998006)
	2-461, gnl\|Mm7\|chr13 (101279292-101279710)